; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028339 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028339
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr8:18841915..18842373
RNA-Seq ExpressionLag0028339
SyntenyLag0028339
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC05288.1 hypothetical protein L484_012321 [Morus notabilis]6.9e-1138.61Show/hide
Query:  DREQVLVDLSANGALLRKTYDEAHAILDRIAPNNYEWGTVEDKRRRPIKTSSGSLEVYPLTSVNAKIDALTTKIDALTTSTTPLIAQLNAVGCGICGEGH
        ++ +V+VD +ANGALL K+Y+E + IL+R+A N+Y+W       R P + + G LEV  +T+++A++  LT     + TST     Q   + C  CGEGH
Subjt:  DREQVLVDLSANGALLRKTYDEAHAILDRIAPNNYEWGTVEDKRRRPIKTSSGSLEVYPLTSVNAKIDALTTKIDALTTSTTPLIAQLNAVGCGICGEGH

Query:  R
        +
Subjt:  R

XP_024019288.1 uncharacterized protein LOC112090963 [Morus notabilis]4.0e-1142.27Show/hide
Query:  QVLVDLSANGALLRKTYDEAHAILDRIAPNNYEWGTVEDKRRRPIKTSSGSLEVYPLTSVNAKIDALTTKIDALTTSTTPLIAQLNAVGCGICGEGH
        +V+VD +ANGALL K+Y+EA+ IL+R+A N+Y+W T     R P + + G L+V  +T++ A++  LT  I  + TST     Q   + C  CGEGH
Subjt:  QVLVDLSANGALLRKTYDEAHAILDRIAPNNYEWGTVEDKRRRPIKTSSGSLEVYPLTSVNAKIDALTTKIDALTTSTTPLIAQLNAVGCGICGEGH

XP_024021914.1 uncharacterized protein LOC112091756 [Morus notabilis]8.1e-1243.3Show/hide
Query:  QVLVDLSANGALLRKTYDEAHAILDRIAPNNYEWGTVEDKRRRPIKTSSGSLEVYPLTSVNAKIDALTTKIDALTTSTTPLIAQLNAVGCGICGEGH
        +V+VD++ANGALL K+Y+EA+ IL+R+A N+Y+W T     R P + + G LEV  +T ++ ++  LT  I  + TST     Q  A+ C  CGEGH
Subjt:  QVLVDLSANGALLRKTYDEAHAILDRIAPNNYEWGTVEDKRRRPIKTSSGSLEVYPLTSVNAKIDALTTKIDALTTSTTPLIAQLNAVGCGICGEGH

XP_024025759.1 uncharacterized protein LOC112092850 [Morus notabilis]2.8e-1244.33Show/hide
Query:  QVLVDLSANGALLRKTYDEAHAILDRIAPNNYEWGTVEDKRRRPIKTSSGSLEVYPLTSVNAKIDALTTKIDALTTSTTPLIAQLNAVGCGICGEGH
        +V+VD +ANGALL K+Y+EA+ IL+R+A N+Y+W T     R P + + G LEV  +T+++A++  LT  I  + TST     Q  A+ C  CGEGH
Subjt:  QVLVDLSANGALLRKTYDEAHAILDRIAPNNYEWGTVEDKRRRPIKTSSGSLEVYPLTSVNAKIDALTTKIDALTTSTTPLIAQLNAVGCGICGEGH

XP_024950038.1 uncharacterized protein LOC112496798 [Citrus sinensis]6.9e-1142.27Show/hide
Query:  QVLVDLSANGALLRKTYDEAHAILDRIAPNNYEWGTVEDKRRRPIKTSSGSLEVYPLTSVNAKIDALTTKIDALTTSTTPLIAQLNAVGCGICGEGH
        +++VD SANGALL K+Y+EA+ IL+RIA NNY+W +    R+   + ++G   V  LT+++A++ +LT  + A+TT+    I Q++ + C  CGEGH
Subjt:  QVLVDLSANGALLRKTYDEAHAILDRIAPNNYEWGTVEDKRRRPIKTSSGSLEVYPLTSVNAKIDALTTKIDALTTSTTPLIAQLNAVGCGICGEGH

TrEMBL top hitse value%identityAlignment
A0A2K3LU72 Retrotrans_gag domain-containing protein1.1e-0935.04Show/hide
Query:  QVLVDLSANGALLRKTYDEAHAILDRIAPNNYEWGTVEDKRRRPIKTSSGSLEVYPLTSVNAKIDALTTKIDALTTSTTPLIAQLNAVGCGICG-EGHRI
        ++ +D +  GAL+ K Y+EA+ +++ +A N+Y+WG+      +P +   G  E+  L  VNAKIDALT KI++LTT+   ++A      C +CG +GH I
Subjt:  QVLVDLSANGALLRKTYDEAHAILDRIAPNNYEWGTVEDKRRRPIKTSSGSLEVYPLTSVNAKIDALTTKIDALTTSTTPLIAQLNAVGCGICG-EGHRI

Query:  SFLRWTSVLQTHNQFYT
        +  +  +   T    YT
Subjt:  SFLRWTSVLQTHNQFYT

A0A6J1EEI2 uncharacterized protein LOC1114333948.2e-1041.59Show/hide
Query:  INIDREQVLVDLSANGALLRKTYDEAHAILDRIAPNNYEWGTVEDKRRRPIKTSSGSLEVYPLTSVNAKIDALTTKIDALT----------TSTTPLIAQ
        +NI  +QV VD SANGA+L KTY+EA+ IL+RIA NN +W    D R  P + + G LEV  L+S+NA++ ++T  +  L             T  +I Q
Subjt:  INIDREQVLVDLSANGALLRKTYDEAHAILDRIAPNNYEWGTVEDKRRRPIKTSSGSLEVYPLTSVNAKIDALTTKIDALT----------TSTTPLIAQ

Query:  LNAVGCGICGEGH
          A  C  CGE H
Subjt:  LNAVGCGICGEGH

A0A6J1EQ90 uncharacterized protein LOC1114364111.8e-0941.59Show/hide
Query:  INIDREQVLVDLSANGALLRKTYDEAHAILDRIAPNNYEWGTVEDKRRRPIKTSSGSLEVYPLTSVNAKIDALTTKIDALT----------TSTTPLIAQ
        +NI  +QV VD SANGA+L KTY+EA+ IL+RIA NN +W    D R  P + + G LEV  L+S+NA++ ++T  +  L             T   I Q
Subjt:  INIDREQVLVDLSANGALLRKTYDEAHAILDRIAPNNYEWGTVEDKRRRPIKTSSGSLEVYPLTSVNAKIDALTTKIDALT----------TSTTPLIAQ

Query:  LNAVGCGICGEGH
          A  C  CGE H
Subjt:  LNAVGCGICGEGH

A0A6J1H7E4 uncharacterized protein LOC1114611681.4e-0940.71Show/hide
Query:  INIDREQVLVDLSANGALLRKTYDEAHAILDRIAPNNYEWGTVEDKRRRPIKTSSGSLEVYPLTSVNAKIDALTTKIDALT----------TSTTPLIAQ
        +NI  +QV VD SANGA+L KTY+EA+ IL+RIA NN +W    D R  P K + G LEV  L+S+NA++ ++T  +  L             T  ++ Q
Subjt:  INIDREQVLVDLSANGALLRKTYDEAHAILDRIAPNNYEWGTVEDKRRRPIKTSSGSLEVYPLTSVNAKIDALTTKIDALT----------TSTTPLIAQ

Query:  LNAVGCGICGEGH
             C  CGE H
Subjt:  LNAVGCGICGEGH

W9RRR5 Retrotrans_gag domain-containing protein3.3e-1138.61Show/hide
Query:  DREQVLVDLSANGALLRKTYDEAHAILDRIAPNNYEWGTVEDKRRRPIKTSSGSLEVYPLTSVNAKIDALTTKIDALTTSTTPLIAQLNAVGCGICGEGH
        ++ +V+VD +ANGALL K+Y+E + IL+R+A N+Y+W       R P + + G LEV  +T+++A++  LT     + TST     Q   + C  CGEGH
Subjt:  DREQVLVDLSANGALLRKTYDEAHAILDRIAPNNYEWGTVEDKRRRPIKTSSGSLEVYPLTSVNAKIDALTTKIDALTTSTTPLIAQLNAVGCGICGEGH

Query:  R
        +
Subjt:  R

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATACTTGAACTATATCATAAATATAGACAGGGAGCAAGTTTTAGTGGACTTATCTGCAAATGGTGCGCTACTCAGGAAAACGTATGATGAAGCTCACGCAATCCT
CGATCGGATTGCGCCAAACAATTATGAGTGGGGGACTGTGGAAGACAAAAGAAGAAGACCTATTAAAACCAGCTCCGGAAGTTTGGAGGTTTACCCATTGACTTCAGTCA
ATGCAAAGATTGATGCGTTGACAACCAAAATTGATGCGCTTACGACTAGCACAACACCATTGATCGCGCAACTCAATGCAGTTGGATGCGGGATCTGTGGAGAGGGACAC
AGAATCAGTTTTCTACGTTGGACCAGTGTTCTTCAAACCCATAATCAGTTTTATACGTTGGATCGCAATGAGTTGTGCACAACAACCCATTTTCGAACACATACAACCCA
AGATGGAGAAATCACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGATACTTGAACTATATCATAAATATAGACAGGGAGCAAGTTTTAGTGGACTTATCTGCAAATGGTGCGCTACTCAGGAAAACGTATGATGAAGCTCACGCAATCCT
CGATCGGATTGCGCCAAACAATTATGAGTGGGGGACTGTGGAAGACAAAAGAAGAAGACCTATTAAAACCAGCTCCGGAAGTTTGGAGGTTTACCCATTGACTTCAGTCA
ATGCAAAGATTGATGCGTTGACAACCAAAATTGATGCGCTTACGACTAGCACAACACCATTGATCGCGCAACTCAATGCAGTTGGATGCGGGATCTGTGGAGAGGGACAC
AGAATCAGTTTTCTACGTTGGACCAGTGTTCTTCAAACCCATAATCAGTTTTATACGTTGGATCGCAATGAGTTGTGCACAACAACCCATTTTCGAACACATACAACCCA
AGATGGAGAAATCACCTAA
Protein sequenceShow/hide protein sequence
MRYLNYIINIDREQVLVDLSANGALLRKTYDEAHAILDRIAPNNYEWGTVEDKRRRPIKTSSGSLEVYPLTSVNAKIDALTTKIDALTTSTTPLIAQLNAVGCGICGEGH
RISFLRWTSVLQTHNQFYTLDRNELCTTTHFRTHTTQDGEIT