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Lag0028366 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028366
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag-pro-like protein
Genome locationchr8:19568413..19568955
RNA-Seq ExpressionLag0028366
SyntenyLag0028366
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK11073.1 Gag-pro-like protein [Cucumis melo var. makuwa]1.6e-0650.85Show/hide
Query:  IPFAIPNLDDPEVKKELV-------VPSNEKLEVLEERLRVVEGTGVFGNMDATQLCLV
        +PF +PN++  EV+ ++         P+ +KL+VLEERLR +EGT V+GN+DATQLCLV
Subjt:  IPFAIPNLDDPEVKKELV-------VPSNEKLEVLEERLRVVEGTGVFGNMDATQLCLV

XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]4.6e-1452.43Show/hide
Query:  MPQHTTYNPLYDIPVGQYPFPPFKEGQIPQIPMASQVGASYFKPEFSKIPFAIPNLDDPEVKKELV---VPSNEKLEVLEERLRVVEGTGVFGNMDATQL
        MPQ+TTYNPLYD+PVGQY  P  K  Q  QIP        + +PE    P  + NL D   K + V    PSNEK EVL+ERLR +E T VFGN+DA+QL
Subjt:  MPQHTTYNPLYDIPVGQYPFPPFKEGQIPQIPMASQVGASYFKPEFSKIPFAIPNLDDPEVKKELV---VPSNEKLEVLEERLRVVEGTGVFGNMDATQL

Query:  CLV
        C V
Subjt:  CLV

XP_022149382.1 uncharacterized protein LOC111017812 [Momordica charantia]4.6e-1455.34Show/hide
Query:  MPQHTTYNPLYDIPVGQYPFPPFKEGQIPQIPMASQVGASYFKPEFSKIPFAIPNLDDPEVKKELV---VPSNEKLEVLEERLRVVEGTGVFGNMDATQL
        M Q+TTYNPLYDI VGQYP PPF +G   QIP        + +PE    P  + NL    VK + V    PSNEK EVLEERL  VEGT VFGN+DA+QL
Subjt:  MPQHTTYNPLYDIPVGQYPFPPFKEGQIPQIPMASQVGASYFKPEFSKIPFAIPNLDDPEVKKELV---VPSNEKLEVLEERLRVVEGTGVFGNMDATQL

Query:  CLV
        CL+
Subjt:  CLV

XP_022155098.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia]8.4e-1654.9Show/hide
Query:  MPQHTTYNPLYDIPVGQYPFPPFKEGQIPQIPMASQVGASYFKPEFSKIPFAIPNLDDPEVKKE---LVVPSNEKLEVLEERLRVVEGTGVFGNMDATQL
        M Q+TTYNPLYDIP GQ+P PP   G  PQ P     G  + +PE    P  + NL  P+  K+      PS+EKLEVLEERLR VEGT VFGN+DA+QL
Subjt:  MPQHTTYNPLYDIPVGQYPFPPFKEGQIPQIPMASQVGASYFKPEFSKIPFAIPNLDDPEVKKE---LVVPSNEKLEVLEERLRVVEGTGVFGNMDATQL

Query:  CL
        CL
Subjt:  CL

XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]2.7e-1451.46Show/hide
Query:  MPQHTTYNPLYDIPVGQYPFPPFKEGQIPQIPMASQVGASYFKPEFSKIPFAIPNLDDPEVKKELV---VPSNEKLEVLEERLRVVEGTGVFGNMDATQL
        MPQ+TTYNPLYD+P+GQYP    K  Q  QIP        + +PE    P  + NL     K + V     S EK EVLEERLR +EGT VFGN+DA+QL
Subjt:  MPQHTTYNPLYDIPVGQYPFPPFKEGQIPQIPMASQVGASYFKPEFSKIPFAIPNLDDPEVKKELV---VPSNEKLEVLEERLRVVEGTGVFGNMDATQL

Query:  CLV
        CLV
Subjt:  CLV

TrEMBL top hitse value%identityAlignment
A0A5D3CGP7 Gag-pro-like protein7.7e-0750.85Show/hide
Query:  IPFAIPNLDDPEVKKELV-------VPSNEKLEVLEERLRVVEGTGVFGNMDATQLCLV
        +PF +PN++  EV+ ++         P+ +KL+VLEERLR +EGT V+GN+DATQLCLV
Subjt:  IPFAIPNLDDPEVKKELV-------VPSNEKLEVLEERLRVVEGTGVFGNMDATQLCLV

A0A6J1D099 Ribonuclease H2.2e-1452.43Show/hide
Query:  MPQHTTYNPLYDIPVGQYPFPPFKEGQIPQIPMASQVGASYFKPEFSKIPFAIPNLDDPEVKKELV---VPSNEKLEVLEERLRVVEGTGVFGNMDATQL
        MPQ+TTYNPLYD+PVGQY  P  K  Q  QIP        + +PE    P  + NL D   K + V    PSNEK EVL+ERLR +E T VFGN+DA+QL
Subjt:  MPQHTTYNPLYDIPVGQYPFPPFKEGQIPQIPMASQVGASYFKPEFSKIPFAIPNLDDPEVKKELV---VPSNEKLEVLEERLRVVEGTGVFGNMDATQL

Query:  CLV
        C V
Subjt:  CLV

A0A6J1D7T3 uncharacterized protein LOC1110178122.2e-1455.34Show/hide
Query:  MPQHTTYNPLYDIPVGQYPFPPFKEGQIPQIPMASQVGASYFKPEFSKIPFAIPNLDDPEVKKELV---VPSNEKLEVLEERLRVVEGTGVFGNMDATQL
        M Q+TTYNPLYDI VGQYP PPF +G   QIP        + +PE    P  + NL    VK + V    PSNEK EVLEERL  VEGT VFGN+DA+QL
Subjt:  MPQHTTYNPLYDIPVGQYPFPPFKEGQIPQIPMASQVGASYFKPEFSKIPFAIPNLDDPEVKKELV---VPSNEKLEVLEERLRVVEGTGVFGNMDATQL

Query:  CLV
        CL+
Subjt:  CLV

A0A6J1DM29 LOW QUALITY PROTEIN: uncharacterized protein LOC1110222314.1e-1654.9Show/hide
Query:  MPQHTTYNPLYDIPVGQYPFPPFKEGQIPQIPMASQVGASYFKPEFSKIPFAIPNLDDPEVKKE---LVVPSNEKLEVLEERLRVVEGTGVFGNMDATQL
        M Q+TTYNPLYDIP GQ+P PP   G  PQ P     G  + +PE    P  + NL  P+  K+      PS+EKLEVLEERLR VEGT VFGN+DA+QL
Subjt:  MPQHTTYNPLYDIPVGQYPFPPFKEGQIPQIPMASQVGASYFKPEFSKIPFAIPNLDDPEVKKE---LVVPSNEKLEVLEERLRVVEGTGVFGNMDATQL

Query:  CL
        CL
Subjt:  CL

A0A6J1DZ90 Ribonuclease H1.3e-1451.46Show/hide
Query:  MPQHTTYNPLYDIPVGQYPFPPFKEGQIPQIPMASQVGASYFKPEFSKIPFAIPNLDDPEVKKELV---VPSNEKLEVLEERLRVVEGTGVFGNMDATQL
        MPQ+TTYNPLYD+P+GQYP    K  Q  QIP        + +PE    P  + NL     K + V     S EK EVLEERLR +EGT VFGN+DA+QL
Subjt:  MPQHTTYNPLYDIPVGQYPFPPFKEGQIPQIPMASQVGASYFKPEFSKIPFAIPNLDDPEVKKELV---VPSNEKLEVLEERLRVVEGTGVFGNMDATQL

Query:  CLV
        CLV
Subjt:  CLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACAACATACTACCTATAACCCCTTATATGACATACCTGTTGGGCAATACCCTTTTCCACCATTTAAAGAAGGCCAAATCCCCCAAATCCCCATGGCTAGCCAAGT
TGGTGCTTCTTATTTCAAGCCAGAATTTTCAAAAATACCTTTTGCGATCCCTAACTTGGATGACCCAGAAGTAAAGAAGGAGCTAGTTGTGCCCTCTAATGAAAAACTTG
AAGTTTTAGAGGAAAGATTGAGGGTGGTAGAGGGCACTGGTGTTTTTGGAAACATGGATGCCACTCAATTATGTTTGGTTCCATGTTGTGATCCCACCGAAATTCAAACT
TCACTACAAGAAATTTACCCTTTCCCGATGCGCTTCGGCGTCGGCAGAAGTTCTCCCGACGCCGTTTGGTGCGTCGGGAAGATAGTCGGAAGAACACTGTCGGCAGAAAC
AGTTTTTCTCGACGCCGTAAAATCGCGTCGAGAGAACTATGCGTGGGGCAAATCGTCCAATTTCTGCCGACGCCGACACGTGGCGTCGGCAGAAATCTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCACAACATACTACCTATAACCCCTTATATGACATACCTGTTGGGCAATACCCTTTTCCACCATTTAAAGAAGGCCAAATCCCCCAAATCCCCATGGCTAGCCAAGT
TGGTGCTTCTTATTTCAAGCCAGAATTTTCAAAAATACCTTTTGCGATCCCTAACTTGGATGACCCAGAAGTAAAGAAGGAGCTAGTTGTGCCCTCTAATGAAAAACTTG
AAGTTTTAGAGGAAAGATTGAGGGTGGTAGAGGGCACTGGTGTTTTTGGAAACATGGATGCCACTCAATTATGTTTGGTTCCATGTTGTGATCCCACCGAAATTCAAACT
TCACTACAAGAAATTTACCCTTTCCCGATGCGCTTCGGCGTCGGCAGAAGTTCTCCCGACGCCGTTTGGTGCGTCGGGAAGATAGTCGGAAGAACACTGTCGGCAGAAAC
AGTTTTTCTCGACGCCGTAAAATCGCGTCGAGAGAACTATGCGTGGGGCAAATCGTCCAATTTCTGCCGACGCCGACACGTGGCGTCGGCAGAAATCTGCTAG
Protein sequenceShow/hide protein sequence
MPQHTTYNPLYDIPVGQYPFPPFKEGQIPQIPMASQVGASYFKPEFSKIPFAIPNLDDPEVKKELVVPSNEKLEVLEERLRVVEGTGVFGNMDATQLCLVPCCDPTEIQT
SLQEIYPFPMRFGVGRSSPDAVWCVGKIVGRTLSAETVFLDAVKSRRENYAWGKSSNFCRRRHVASAEIC