; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028367 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028367
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr8:19617143..19620005
RNA-Seq ExpressionLag0028367
SyntenyLag0028367
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156327.1 uncharacterized protein LOC111023248 [Momordica charantia]1.3e-0737.5Show/hide
Query:  LNFQEETRAGIQQLGTQITQLTDTVSKLEAKG-----DKLPVQPGIPRREDVCTTMLRSGTVLSSNPKISSPPAFKKNKEANKPENEKTDNLDFPRKRGV
        L FQ+ETR G+Q LG QITQL  ++S+LEA+       ++ V P   + E +   MLR+   +   P +S P    K  E ++ + E + N+      G+
Subjt:  LNFQEETRAGIQQLGTQITQLTDTVSKLEAKG-----DKLPVQPGIPRREDVCTTMLRSGTVLSSNPKISSPPAFKKNKEANKPENEKTDNLDFPRKRGV

Query:  HFDPPLNLNSFVPKAPFPSR
        +FDPPL+L+S+    PFPSR
Subjt:  HFDPPLNLNSFVPKAPFPSR

XP_031091054.1 uncharacterized protein LOC115996048 [Ipomoea triloba]9.3e-0638.16Show/hide
Query:  NSKFLYFSANHQSQEGQLN------------------FQEETRAGIQQLGTQITQLTDTVSKLEAKGD-KLPVQPGIPRREDVCTTMLRSGTVLSSNPKI
        N  F  F A  QSQ    N                  FQ+ETRAGIQQLG QI+QL  +V KLEA+   KLP+Q  +  +E+V    LRSG  L      
Subjt:  NSKFLYFSANHQSQEGQLN------------------FQEETRAGIQQLGTQITQLTDTVSKLEAKGD-KLPVQPGIPRREDVCTTMLRSGTVLSSNPKI

Query:  SSPPAFKKNKEANKPENEKTDNLDFPRKRGVHFDPPL-NLNSFVPKAPFPSR
        SS P  ++ +E +K ENE   N        V  +  +   NS +P  PFPSR
Subjt:  SSPPAFKKNKEANKPENEKTDNLDFPRKRGVHFDPPL-NLNSFVPKAPFPSR

XP_031108596.1 uncharacterized protein LOC116013076 [Ipomoea triloba]2.4e-0638.82Show/hide
Query:  NSKFLYFSANHQSQEGQLN------------------FQEETRAGIQQLGTQITQLTDTVSKLEAKG-DKLPVQPGIPRREDVCTTMLRSGTVLSSNPKI
        N  F  F A  QSQ   LN                  FQ+ETRAGIQQLG QI+QL  +VSKLEA+   KLP Q  +  +E+V    LRSG  L      
Subjt:  NSKFLYFSANHQSQEGQLN------------------FQEETRAGIQQLGTQITQLTDTVSKLEAKG-DKLPVQPGIPRREDVCTTMLRSGTVLSSNPKI

Query:  SSPPAFKKNKEANKPENEKTDNLDFPRKRGVHFDPPL-NLNSFVPKAPFPSR
        SS P  ++ +E ++ ENE   N        V  +  +   NS +P  PFPSR
Subjt:  SSPPAFKKNKEANKPENEKTDNLDFPRKRGVHFDPPL-NLNSFVPKAPFPSR

XP_031131881.1 uncharacterized protein LOC116033267 [Ipomoea triloba]7.1e-0638.16Show/hide
Query:  NSKFLYFSANHQSQEGQLN------------------FQEETRAGIQQLGTQITQLTDTVSKLEAKGD-KLPVQPGIPRREDVCTTMLRSGTVLSSNPKI
        N  F  F A  QSQ    N                  FQ+ET AGIQQLG QI+QL  +VSKLEA+   KLP Q  +  +E+V    LRSG  L      
Subjt:  NSKFLYFSANHQSQEGQLN------------------FQEETRAGIQQLGTQITQLTDTVSKLEAKGD-KLPVQPGIPRREDVCTTMLRSGTVLSSNPKI

Query:  SSPPAFKKNKEANKPENEKTDNLDFPRKRGVHFDPPL-NLNSFVPKAPFPSR
        S  P  ++N+E +K ENE   N    +   V  +  +   NS +P  PFPSR
Subjt:  SSPPAFKKNKEANKPENEKTDNLDFPRKRGVHFDPPL-NLNSFVPKAPFPSR

XP_038877406.1 uncharacterized protein LOC120069694 [Benincasa hispida]1.1e-0635.54Show/hide
Query:  QEGQLNFQEETRAGIQQLGTQITQLTDTVSKLEAKGDKLPVQPGIPRREDVCTTMLRSGTVLSSNPKISSPPAFKKNKEANKPENEKTDNLDFP--RKRG
        Q+   +FQ++T+  I+ LGTQ++QL  ++S+LE +  KL  QP     E+V    LRSG       ++  P    K  +   PE   +D   FP   K+G
Subjt:  QEGQLNFQEETRAGIQQLGTQITQLTDTVSKLEAKGDKLPVQPGIPRREDVCTTMLRSGTVLSSNPKISSPPAFKKNKEANKPENEKTDNLDFP--RKRG

Query:  VHFDPPLNLNSFVPKAPFPSR
        V   P   L+++VPKA FPS+
Subjt:  VHFDPPLNLNSFVPKAPFPSR

TrEMBL top hitse value%identityAlignment
A0A0J8BAH8 Retrotrans_gag domain-containing protein2.9e-0536.75Show/hide
Query:  LNFQEETRAGIQQLGTQITQLTDTVSKLEA-KGDKLPVQPGIPRREDVCTTMLRSGTVLSSNPKISSPPAFKKNKEANKPENEKTDNLD-FPRKRGVHFD
        L FQ+ETR+G+Q L  Q++QL DTV +L+A   +KLP QP    +E+     +RS   L         P   K+K     E E T+  D    ++ V  D
Subjt:  LNFQEETRAGIQQLGTQITQLTDTVSKLEA-KGDKLPVQPGIPRREDVCTTMLRSGTVLSSNPKISSPPAFKKNKEANKPENEKTDNLD-FPRKRGVHFD

Query:  PPLNLNSFVPKAPFPSR
         PL  N F    P+PSR
Subjt:  PPLNLNSFVPKAPFPSR

A0A6J1DRS5 uncharacterized protein LOC1110232486.3e-0837.5Show/hide
Query:  LNFQEETRAGIQQLGTQITQLTDTVSKLEAKG-----DKLPVQPGIPRREDVCTTMLRSGTVLSSNPKISSPPAFKKNKEANKPENEKTDNLDFPRKRGV
        L FQ+ETR G+Q LG QITQL  ++S+LEA+       ++ V P   + E +   MLR+   +   P +S P    K  E ++ + E + N+      G+
Subjt:  LNFQEETRAGIQQLGTQITQLTDTVSKLEAKG-----DKLPVQPGIPRREDVCTTMLRSGTVLSSNPKISSPPAFKKNKEANKPENEKTDNLDFPRKRGV

Query:  HFDPPLNLNSFVPKAPFPSR
        +FDPPL+L+S+    PFPSR
Subjt:  HFDPPLNLNSFVPKAPFPSR

A0A6N2NBX1 Uncharacterized protein1.5e-0635.77Show/hide
Query:  FQEETRAGIQQLGTQITQLTDTVSKLEAKGDKLPVQPGIPRREDVCTTMLRSG-TVLSSNPKISSPPAFKKNKEANKPENEKTDNLDFPRKRG---VHFD
        FQ+ETRA IQ L TQ++QL  ++ K++A   KLP QP +  RE+    +LRSG  V +S+P+++ P   K  KE N P       L+ P  +    V  +
Subjt:  FQEETRAGIQQLGTQITQLTDTVSKLEAKGDKLPVQPGIPRREDVCTTMLRSG-TVLSSNPKISSPPAFKKNKEANKPENEKTDNLDFPRKRG---VHFD

Query:  PPLNLNSFVPKAPFPSRSMPTRR
          ++  + +   PFPSR   T++
Subjt:  PPLNLNSFVPKAPFPSRSMPTRR

A0A6P4N313 uncharacterized protein LOC1084623474.2e-0433.62Show/hide
Query:  QLNFQEETRAGIQQLGTQITQLTDTVSKLEAKGDKLPVQPGIPRREDVCTTMLRSGTVLSSNPKISSPPAFKKNKEANKPENEKTDNLDFPRKRGVHFDP
        Q  FQ +T++ +Q++  QI+QL  TV +LE++G +LP Q  I  RE+V   +LRSGTV+S  P    P   +K+KE    ++++  +     K      P
Subjt:  QLNFQEETRAGIQQLGTQITQLTDTVSKLEAKGDKLPVQPGIPRREDVCTTMLRSGTVLSSNPKISSPPAFKKNKEANKPENEKTDNLDFPRKRGVHFDP

Query:  PLNLNSFVPKAPFPSR
          +L+++    PFP +
Subjt:  PLNLNSFVPKAPFPSR

A0A6P8DJV3 Reverse transcriptase4.2e-0435.65Show/hide
Query:  LNFQEETRAGIQQLGTQITQLTDTVSKLEAKGDKLPVQPGIPRREDVCTTMLRSGTVLSSNPKISSPPAFKKNKEANKPENEKTDNLDFPRKRGVHFDPP
        L+FQ+E RA IQ L  Q++QL  TVSKLE    KLP Q  I  RE+     LRSG VL      + P   +   + ++ E +K  ++D  ++  ++    
Subjt:  LNFQEETRAGIQQLGTQITQLTDTVSKLEAKGDKLPVQPGIPRREDVCTTMLRSGTVLSSNPKISSPPAFKKNKEANKPENEKTDNLDFPRKRGVHFDPP

Query:  LNLNSFVPKAPFPSR
          +   V   PFPSR
Subjt:  LNLNSFVPKAPFPSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGGGAAATTCCAAATTCCTCTACTTTTCTGCAAATCACCAAAGCCAAGAAGGTCAACTCAATTTCCAAGAGGAGACTCGAGCTGGGATACAGCAACTAGGAACCCA
AATTACCCAGTTGACTGACACTGTCAGTAAATTGGAGGCTAAAGGGGACAAGCTACCTGTTCAACCTGGGATCCCAAGGAGAGAAGATGTATGCACAACAATGTTGAGGA
GTGGGACAGTCTTGAGTTCTAATCCAAAGATTTCTTCTCCGCCTGCATTTAAGAAGAACAAAGAAGCAAATAAGCCTGAAAACGAGAAAACAGACAATCTCGACTTTCCA
AGGAAACGAGGGGTACATTTTGATCCACCCTTAAATTTAAACTCTTTTGTTCCTAAAGCTCCCTTTCCTAGCAGATCCATGCCGACGAGGAGACTGACTCTGAAACAGAG
ACCAAATCGAGACCCACCATCGTGTAAAACCCACCCCCTCCCGTTTGCTGTTTTCTTCTTATCGCAGACCCACCGTCCCCTCCCGCCGGCAACAAACTCTCGAGGAACCC
ACGCCGCTGTCACCTCTCCATCTCTATCCCTCGATTATCCTTGTTCAGCTGCGAAACCCACGGGGAAGTGGGGAGGGAAACGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGGGGAAATTCCAAATTCCTCTACTTTTCTGCAAATCACCAAAGCCAAGAAGGTCAACTCAATTTCCAAGAGGAGACTCGAGCTGGGATACAGCAACTAGGAACCCA
AATTACCCAGTTGACTGACACTGTCAGTAAATTGGAGGCTAAAGGGGACAAGCTACCTGTTCAACCTGGGATCCCAAGGAGAGAAGATGTATGCACAACAATGTTGAGGA
GTGGGACAGTCTTGAGTTCTAATCCAAAGATTTCTTCTCCGCCTGCATTTAAGAAGAACAAAGAAGCAAATAAGCCTGAAAACGAGAAAACAGACAATCTCGACTTTCCA
AGGAAACGAGGGGTACATTTTGATCCACCCTTAAATTTAAACTCTTTTGTTCCTAAAGCTCCCTTTCCTAGCAGATCCATGCCGACGAGGAGACTGACTCTGAAACAGAG
ACCAAATCGAGACCCACCATCGTGTAAAACCCACCCCCTCCCGTTTGCTGTTTTCTTCTTATCGCAGACCCACCGTCCCCTCCCGCCGGCAACAAACTCTCGAGGAACCC
ACGCCGCTGTCACCTCTCCATCTCTATCCCTCGATTATCCTTGTTCAGCTGCGAAACCCACGGGGAAGTGGGGAGGGAAACGCTGA
Protein sequenceShow/hide protein sequence
MRGNSKFLYFSANHQSQEGQLNFQEETRAGIQQLGTQITQLTDTVSKLEAKGDKLPVQPGIPRREDVCTTMLRSGTVLSSNPKISSPPAFKKNKEANKPENEKTDNLDFP
RKRGVHFDPPLNLNSFVPKAPFPSRSMPTRRLTLKQRPNRDPPSCKTHPLPFAVFFLSQTHRPLPPATNSRGTHAAVTSPSLSLDYPCSAAKPTGKWGGKR