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Lag0028369 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028369
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionE3 ubiquitin-protein ligase COP1-like
Genome locationchr8:19647408..19647941
RNA-Seq ExpressionLag0028369
SyntenyLag0028369
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.9e-0845.68Show/hide
Query:  DAKKGFLI--RERFGEDLPHFLRVGIANHDWSQFCAKPDPLNSNIVREFYANIDNAEEFQAMVRGVAVDWSSRAINSLFNL
        +A+KGF++   E  G+ LP   +V I  H+W QFCA P+     +VREFYAN+ +  E    VRGV V WS  AIN++F L
Subjt:  DAKKGFLI--RERFGEDLPHFLRVGIANHDWSQFCAKPDPLNSNIVREFYANIDNAEEFQAMVRGVAVDWSSRAINSLFNL

PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]9.6e-0841.03Show/hide
Query:  AKKGFLIRERFGEDLPHFLRVGIANHDWSQFCAKPDPLNSNIVREFYANIDNAEEFQAMVRGVAVDWSSRAINSLFNL
        A+KGF+       + P F+   I  H+W  FCA P+ L + +VREFYAN+ N ++    VRGV V  S+ AIN+++ L
Subjt:  AKKGFLIRERFGEDLPHFLRVGIANHDWSQFCAKPDPLNSNIVREFYANIDNAEEFQAMVRGVAVDWSSRAINSLFNL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.0e-0946.91Show/hide
Query:  DAKKGFLI--RERFGEDLPHFLRVGIANHDWSQFCAKPDPLNSNIVREFYANIDNAEEFQAMVRGVAVDWSSRAINSLFNL
        +A+KGF++   E  G+ LP   +V I  H+W QFCA P+     +VREFYAN+ + EE    VRGV V WS  AIN++F L
Subjt:  DAKKGFLI--RERFGEDLPHFLRVGIANHDWSQFCAKPDPLNSNIVREFYANIDNAEEFQAMVRGVAVDWSSRAINSLFNL

PON85987.1 hypothetical protein TorRG33x02_181920, partial [Trema orientale]8.7e-0943.04Show/hide
Query:  DAKKGFLIRERFGEDLPHFLRVGIANHDWSQFCAKPDPLNSNIVREFYANIDNAEEFQAMVRGVAVDWSSRAINSLFNL
        +A+KGFL+          F+   I  H+W QFCA P+     +VREFYAN+ + EE    VRGV V W+  AIN++F L
Subjt:  DAKKGFLIRERFGEDLPHFLRVGIANHDWSQFCAKPDPLNSNIVREFYANIDNAEEFQAMVRGVAVDWSSRAINSLFNL

PON90635.1 hypothetical protein TorRG33x02_134920 [Trema orientale]4.8e-0742.31Show/hide
Query:  AKKGFLIRERFGEDLPHFLRVGIANHDWSQFCAKPDPLNSNIVREFYANIDNAEEFQAMVRGVAVDWSSRAINSLFNL
        A+KGF          P F+   I  H+W  FCA  +     +VREFYAN+ + EE    V+GV V WS  AIN+LF L
Subjt:  AKKGFLIRERFGEDLPHFLRVGIANHDWSQFCAKPDPLNSNIVREFYANIDNAEEFQAMVRGVAVDWSSRAINSLFNL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)9.4e-0945.68Show/hide
Query:  DAKKGFLI--RERFGEDLPHFLRVGIANHDWSQFCAKPDPLNSNIVREFYANIDNAEEFQAMVRGVAVDWSSRAINSLFNL
        +A+KGF++   E  G+ LP   +V I  H+W QFCA P+     +VREFYAN+ +  E    VRGV V WS  AIN++F L
Subjt:  DAKKGFLI--RERFGEDLPHFLRVGIANHDWSQFCAKPDPLNSNIVREFYANIDNAEEFQAMVRGVAVDWSSRAINSLFNL

A0A2P5B0K0 Uncharacterized protein4.7e-0841.03Show/hide
Query:  AKKGFLIRERFGEDLPHFLRVGIANHDWSQFCAKPDPLNSNIVREFYANIDNAEEFQAMVRGVAVDWSSRAINSLFNL
        A+KGF+       + P F+   I  H+W  FCA P+ L + +VREFYAN+ N ++    VRGV V  S+ AIN+++ L
Subjt:  AKKGFLIRERFGEDLPHFLRVGIANHDWSQFCAKPDPLNSNIVREFYANIDNAEEFQAMVRGVAVDWSSRAINSLFNL

A0A2P5BCG4 Uncharacterized protein (Fragment)1.4e-0946.91Show/hide
Query:  DAKKGFLI--RERFGEDLPHFLRVGIANHDWSQFCAKPDPLNSNIVREFYANIDNAEEFQAMVRGVAVDWSSRAINSLFNL
        +A+KGF++   E  G+ LP   +V I  H+W QFCA P+     +VREFYAN+ + EE    VRGV V WS  AIN++F L
Subjt:  DAKKGFLI--RERFGEDLPHFLRVGIANHDWSQFCAKPDPLNSNIVREFYANIDNAEEFQAMVRGVAVDWSSRAINSLFNL

A0A2P5EK98 Uncharacterized protein (Fragment)4.2e-0943.04Show/hide
Query:  DAKKGFLIRERFGEDLPHFLRVGIANHDWSQFCAKPDPLNSNIVREFYANIDNAEEFQAMVRGVAVDWSSRAINSLFNL
        +A+KGFL+          F+   I  H+W QFCA P+     +VREFYAN+ + EE    VRGV V W+  AIN++F L
Subjt:  DAKKGFLIRERFGEDLPHFLRVGIANHDWSQFCAKPDPLNSNIVREFYANIDNAEEFQAMVRGVAVDWSSRAINSLFNL

A0A2P5EYL5 Uncharacterized protein2.3e-0742.31Show/hide
Query:  AKKGFLIRERFGEDLPHFLRVGIANHDWSQFCAKPDPLNSNIVREFYANIDNAEEFQAMVRGVAVDWSSRAINSLFNL
        A+KGF          P F+   I  H+W  FCA  +     +VREFYAN+ + EE    V+GV V WS  AIN+LF L
Subjt:  AKKGFLIRERFGEDLPHFLRVGIANHDWSQFCAKPDPLNSNIVREFYANIDNAEEFQAMVRGVAVDWSSRAINSLFNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCCGTCGGAAGCAAAAAGCGAGTCGTTTAAGGGAGATGCTAAAAAGGGATTTCTTATTCGAGAGAGGTTTGGTGAAGATTTACCACATTTCTTAAGGGTCGGGAT
CGCGAATCACGACTGGAGTCAATTTTGTGCAAAACCAGATCCGTTGAATTCAAACATCGTTCGAGAATTTTATGCGAATATTGACAATGCAGAAGAATTTCAAGCCATGG
TCCGAGGAGTGGCTGTTGACTGGAGCTCAAGAGCTATCAATTCATTATTCAACCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGCCGTCGGAAGCAAAAAGCGAGTCGTTTAAGGGAGATGCTAAAAAGGGATTTCTTATTCGAGAGAGGTTTGGTGAAGATTTACCACATTTCTTAAGGGTCGGGAT
CGCGAATCACGACTGGAGTCAATTTTGTGCAAAACCAGATCCGTTGAATTCAAACATCGTTCGAGAATTTTATGCGAATATTGACAATGCAGAAGAATTTCAAGCCATGG
TCCGAGGAGTGGCTGTTGACTGGAGCTCAAGAGCTATCAATTCATTATTCAACCTCTAG
Protein sequenceShow/hide protein sequence
MSPSEAKSESFKGDAKKGFLIRERFGEDLPHFLRVGIANHDWSQFCAKPDPLNSNIVREFYANIDNAEEFQAMVRGVAVDWSSRAINSLFNL