; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028372 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028372
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr8:19747644..19759548
RNA-Seq ExpressionLag0028372
SyntenyLag0028372
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026067.1 gag/pol protein [Cucumis melo var. makuwa]2.1e-2487.32Show/hide
Query:  MLVYGSKDQILTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVV
        MLVYGSKD ILTGYTDSDFQTD DSRKSTLGS+FTLN GAVVW +IKQGCI DSTMEAEYVAACEAAK  V
Subjt:  MLVYGSKDQILTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVV
KAA0046366.1 gag/pol protein [Cucumis melo var. makuwa]6.1e-2485.92Show/hide
Query:  MLVYGSKDQILTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVV
        MLVYGSKD ILTGYTDSDFQTD DSRKST GS+FTLN GAVVW +IKQGCI DSTMEAEYVAACEAAK  V
Subjt:  MLVYGSKDQILTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVV
KAA0046416.1 gag/pol protein [Cucumis melo var. makuwa]3.6e-2487.32Show/hide
Query:  MLVYGSKDQILTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVV
        MLVYGSKD ILTGYTDSDFQTD DSRKST GS+FTLN GAVVW +IKQGCIVDSTMEAEYVAACEAAK  V
Subjt:  MLVYGSKDQILTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVV
KAA0061170.1 gag/pol protein [Cucumis melo var. makuwa]3.6e-2485.92Show/hide
Query:  MLVYGSKDQILTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVV
        MLVYG+KD ILTGYTDSDFQTD DSRKST GS+FTLNEGAVVW +IKQGCI DSTMEAEYVAACEAAK  V
Subjt:  MLVYGSKDQILTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVV
TYK05759.1 gag/pol protein [Cucumis melo var. makuwa]3.6e-2487.32Show/hide
Query:  MLVYGSKDQILTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVV
        MLVYGSKD ILTGYTDSDFQTD DSRKST GS+FTLN GAVVW +IKQGCIVDSTMEAEYVAACEAAK  V
Subjt:  MLVYGSKDQILTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVV
TrEMBL top hitse value%identityAlignment
A0A5A7SMW0 Gag/pol protein1.0e-2487.32Show/hide
Query:  MLVYGSKDQILTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVV
        MLVYGSKD ILTGYTDSDFQTD DSRKSTLGS+FTLN GAVVW +IKQGCI DSTMEAEYVAACEAAK  V
Subjt:  MLVYGSKDQILTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVV
A0A5A7TWI0 Gag/pol protein1.7e-2487.32Show/hide
Query:  MLVYGSKDQILTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVV
        MLVYGSKD ILTGYTDSDFQTD DSRKST GS+FTLN GAVVW +IKQGCIVDSTMEAEYVAACEAAK  V
Subjt:  MLVYGSKDQILTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVV
A0A5A7V1F5 Gag/pol protein1.7e-2485.92Show/hide
Query:  MLVYGSKDQILTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVV
        MLVYG+KD ILTGYTDSDFQTD DSRKST GS+FTLNEGAVVW +IKQGCI DSTMEAEYVAACEAAK  V
Subjt:  MLVYGSKDQILTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVV
A0A5D3C5V6 Gag/pol protein1.7e-2487.32Show/hide
Query:  MLVYGSKDQILTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVV
        MLVYGSKD ILTGYTDSDFQTD DSRKST GS+FTLN GAVVW +IKQGCIVDSTMEAEYVAACEAAK  V
Subjt:  MLVYGSKDQILTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVV
A0A5D3C9Z1 Gag/pol protein3.0e-2484.51Show/hide
Query:  MLVYGSKDQILTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVV
        MLVYG+KD ILTGYTDSDFQTD DSRKSTLGS+FTLN GAV+W +IKQGCI DSTMEAEYVAACEAAK  V
Subjt:  MLVYGSKDQILTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVV
SwissProt top hitse value%identityAlignment
P0CV72 Secreted RxLR effector protein 1613.5e-0644.26Show/hide
Query:  LTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVV
        L GY+D+D+  D++SR+ST G +F LN G V W + KQ  +  S+ E EY+A  EA +  V
Subjt:  LTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVV
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.1e-1148.57Show/hide
Query:  LVYGSKDQILTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVV
        L +G  D IL GYTD+D   DID+RKS+ G +FT + GA+ W +  Q C+  ST EAEY+AA E  K ++
Subjt:  LVYGSKDQILTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVV
Arabidopsis top hitse value%identityAlignment
AT4G32140.1 EamA-like transporter family3.8e-0866.67Show/hide
Query:  LCIVMWLDTYLSNVALAQTSVDASTTVLSSTSGLFTLFIDATLCQDSLNMVKVV-VFVNM
        L  + ++  YLSN ALA+TSV ASTTVLSSTSGLFTLFI   L QD+LN+ KVV VFV+M
Subjt:  LCIVMWLDTYLSNVALAQTSVDASTTVLSSTSGLFTLFIDATLCQDSLNMVKVV-VFVNM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGTGTATGGTTCGAAGGATCAGATCCTTACTGGTTACACCGACTCTGACTTTCAAACTGACATAGATTCACGGAAATCTACACTAGGGTCAATATTTACTCTGAA
TGAAGGAGCAGTAGTATGGGGAAACATTAAACAAGGATGCATCGTTGACTCCACCATGGAAGCAGAGTATGTTGCTGCATGTGAAGCAGCCAAAGTAGTAGTCCGTGCGT
GTCCCCTCCCCTCTGGCGAACAACTTCGACGACGGCGCAGCAGCAACGACGGTTCGTCGGCGTCGAGCACTCCTTCGCGCGACCAACCGCGATTTCTACATGGGTTAGTG
TATTTCTCTCAGTTTTTCGCTCCTCAAGGCCTGATTCCTTTCTCTCCTTCGTTCTCTCCCTCACTCGTGATCTCCTTCTCTGTTTTCCAACATTTTTCCAGTGAGTTTCA
AGCGGGGCAGTGGTTGTTTTCGCAATTTTCTGGCAGATACTTTGATGCCAACAGAACTTCCCTATTAGATCCTCAGACTCCCAGTTCATCTGGAATTAGACAAGTTGATG
CTGAAGAAAAACGCGGACACGACGACAACAACTCGGGAGAGGCAACGAGTTTCGTCTCTTTCTTCGGCGAGTCAGTGGCGGTGGCGACAGGGTGCTTTCAGCAGCAGTGT
GAAGCTTCACGTGGTGTGCCCTCATTCCCAACTAATTTAAAGGTTGTTGAGTGCGTTTCAGAGCTATGTGATATAGTTTCCCATAGATTTGGCAACTTACCTTTTGCTTT
GGCCACCAAGCTTATTCAAATTATTGTTGTTTCTTTGTATAGTGTTGGAAAGATTACCTTGTTGTGTACTGTTGTTACCTTGTGTATTGTCATGTGGCTTGATACGTATC
TATCAAATGTTGCCCTTGCACAGACAAGTGTCGATGCTAGTACAACAGTTTTATCATCTACTTCTGGACTTTTTACTCTATTCATTGATGCTACCCTGTGCCAAGATTCA
TTAAATATGGTCAAAGTCGTTGTCTTTGTCAACATGTTGTTCTCTTGTGTTCTTTCTTGTAGCAGCTACAGTGATATAGAGCTTATAGATGTGAAGATTAAGGACTTGAA
GAAACAACCGAGATTTATGATTAGTGAAGTCAAGAAGCCATATTGCAATTTATTGATGCCAAGAGGAAATAGGTCGAGTCTACAGACTAGGAAACTAGCTAAGACTATTT
CTATTGACTACATGACCGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCTTGATACACTACTAACGTCTGTTGAAAGT
TCCAGATTAAGCTCCAATACGTGGGTGGAGTTGTATATTGAGTCTGTCTATATTGTTATTTTCCAAACCGAGTTATGTCAGGGCGACACCTCGTTCTACGTTTCAGAAGG
GTTAACAGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGTGTATGGTTCGAAGGATCAGATCCTTACTGGTTACACCGACTCTGACTTTCAAACTGACATAGATTCACGGAAATCTACACTAGGGTCAATATTTACTCTGAA
TGAAGGAGCAGTAGTATGGGGAAACATTAAACAAGGATGCATCGTTGACTCCACCATGGAAGCAGAGTATGTTGCTGCATGTGAAGCAGCCAAAGTAGTAGTCCGTGCGT
GTCCCCTCCCCTCTGGCGAACAACTTCGACGACGGCGCAGCAGCAACGACGGTTCGTCGGCGTCGAGCACTCCTTCGCGCGACCAACCGCGATTTCTACATGGGTTAGTG
TATTTCTCTCAGTTTTTCGCTCCTCAAGGCCTGATTCCTTTCTCTCCTTCGTTCTCTCCCTCACTCGTGATCTCCTTCTCTGTTTTCCAACATTTTTCCAGTGAGTTTCA
AGCGGGGCAGTGGTTGTTTTCGCAATTTTCTGGCAGATACTTTGATGCCAACAGAACTTCCCTATTAGATCCTCAGACTCCCAGTTCATCTGGAATTAGACAAGTTGATG
CTGAAGAAAAACGCGGACACGACGACAACAACTCGGGAGAGGCAACGAGTTTCGTCTCTTTCTTCGGCGAGTCAGTGGCGGTGGCGACAGGGTGCTTTCAGCAGCAGTGT
GAAGCTTCACGTGGTGTGCCCTCATTCCCAACTAATTTAAAGGTTGTTGAGTGCGTTTCAGAGCTATGTGATATAGTTTCCCATAGATTTGGCAACTTACCTTTTGCTTT
GGCCACCAAGCTTATTCAAATTATTGTTGTTTCTTTGTATAGTGTTGGAAAGATTACCTTGTTGTGTACTGTTGTTACCTTGTGTATTGTCATGTGGCTTGATACGTATC
TATCAAATGTTGCCCTTGCACAGACAAGTGTCGATGCTAGTACAACAGTTTTATCATCTACTTCTGGACTTTTTACTCTATTCATTGATGCTACCCTGTGCCAAGATTCA
TTAAATATGGTCAAAGTCGTTGTCTTTGTCAACATGTTGTTCTCTTGTGTTCTTTCTTGTAGCAGCTACAGTGATATAGAGCTTATAGATGTGAAGATTAAGGACTTGAA
GAAACAACCGAGATTTATGATTAGTGAAGTCAAGAAGCCATATTGCAATTTATTGATGCCAAGAGGAAATAGGTCGAGTCTACAGACTAGGAAACTAGCTAAGACTATTT
CTATTGACTACATGACCGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCTTGATACACTACTAACGTCTGTTGAAAGT
TCCAGATTAAGCTCCAATACGTGGGTGGAGTTGTATATTGAGTCTGTCTATATTGTTATTTTCCAAACCGAGTTATGTCAGGGCGACACCTCGTTCTACGTTTCAGAAGG
GTTAACAGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTAG
Protein sequenceShow/hide protein sequence
MLVYGSKDQILTGYTDSDFQTDIDSRKSTLGSIFTLNEGAVVWGNIKQGCIVDSTMEAEYVAACEAAKVVVRACPLPSGEQLRRRRSSNDGSSASSTPSRDQPRFLHGLV
YFSQFFAPQGLIPFSPSFSPSLVISFSVFQHFSSEFQAGQWLFSQFSGRYFDANRTSLLDPQTPSSSGIRQVDAEEKRGHDDNNSGEATSFVSFFGESVAVATGCFQQQC
EASRGVPSFPTNLKVVECVSELCDIVSHRFGNLPFALATKLIQIIVVSLYSVGKITLLCTVVTLCIVMWLDTYLSNVALAQTSVDASTTVLSSTSGLFTLFIDATLCQDS
LNMVKVVVFVNMLFSCVLSCSSYSDIELIDVKIKDLKKQPRFMISEVKKPYCNLLMPRGNRSSLQTRKLAKTISIDYMTEILSPRLYGTVCTQVEIELPVLDTLLTSVES
SRLSSNTWVELYIESVYIVIFQTELCQGDTSFYVSEGLTGIVRGGRCSLASRHLPD