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Lag0028376 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028376
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr8:19884378..19884728
RNA-Seq ExpressionLag0028376
SyntenyLag0028376
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]5.4e-0833.33Show/hide
Query:  CAHPQEVVVPLVREFYAGLREESMSLAIVHRKMVSFSSVDINNIF----------------------QVKAPLHPRGNDAIKNPSA------KQLKPELA
        C HP   +VPLVREFYA L + +     V    V F++  IN+IF                       V A +   G     +P        K+LK    
Subjt:  CAHPQEVVVPLVREFYAGLREESMSLAIVHRKMVSFSSVDINNIF----------------------QVKAPLHPRGNDAIKNPSA------KQLKPELA

Query:  IGLHFIKNRLMPTTHDITISVERVMLLYSIMKGFKINI
        I  HF+  R MP+TH  T++ +RV+LLYSI+ G  +NI
Subjt:  IGLHFIKNRLMPTTHDITISVERVMLLYSIMKGFKINI

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.2e-0933.81Show/hide
Query:  CAHPQEVVVPLVREFYAGLREESMSLAIVHRKMVSFSSVDINNIFQVKAPLHPRG--------NDAIK------------NPSAK--------QLKPELA
        CAHP++ +VPLVREFYA L +   +   V    VS+S   IN +F +  P+            +D I             N SA+         L P   
Subjt:  CAHPQEVVVPLVREFYAGLREESMSLAIVHRKMVSFSSVDINNIFQVKAPLHPRG--------NDAIK------------NPSAK--------QLKPELA

Query:  IGLHFIKNRLMPTTHDITISVERVMLLYSIMKGFKINIG
        +  HF+K+ L+PTTH  T+S +R++LL+S++ G  IN+G
Subjt:  IGLHFIKNRLMPTTHDITISVERVMLLYSIMKGFKINIG

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]5.8e-1033.81Show/hide
Query:  CAHPQEVVVPLVREFYAGLREESMSLAIVHRKMVSFSSVDINNIFQVKAPLHPRGN--------------------DAIKNPSAK--------QLKPELA
        CAHP++ +VPLVREFYA L +   +   V    VS+S   IN +F +  P+                          A  N SA+         L P   
Subjt:  CAHPQEVVVPLVREFYAGLREESMSLAIVHRKMVSFSSVDINNIFQVKAPLHPRGN--------------------DAIKNPSAK--------QLKPELA

Query:  IGLHFIKNRLMPTTHDITISVERVMLLYSIMKGFKINIG
        +  HF+K+RL+PTTH  T+S +R++LL+S++ G  IN+G
Subjt:  IGLHFIKNRLMPTTHDITISVERVMLLYSIMKGFKINIG

PON46588.1 hypothetical protein TorRG33x02_325580, partial [Trema orientale]9.3e-0833.09Show/hide
Query:  CAHPQEVVVPLVREFYAGLREESMSLAIVHRKMVSFSSVDINNIFQVKAPLH-----------------------PRGNDAIKNPSA-----KQLKPELA
        CAHP++ +VPLVREFYA L +       V    V  S   IN IF +  P+                         R    + + SA       L     
Subjt:  CAHPQEVVVPLVREFYAGLREESMSLAIVHRKMVSFSSVDINNIFQVKAPLH-----------------------PRGNDAIKNPSA-----KQLKPELA

Query:  IGLHFIKNRLMPTTHDITISVERVMLLYSIMKGFKINIG
        I  HF+++RL+PTTH   +S   V+LLYSI+ G  IN+G
Subjt:  IGLHFIKNRLMPTTHDITISVERVMLLYSIMKGFKINIG

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]1.7e-0932.37Show/hide
Query:  CAHPQEVVVPLVREFYAGLREESMSLAIVHRKMVSFSSVDINNIFQVKAPL--HPRGNDAIKNPS--------------------------AKQLKPELA
        CAHP++ +VPLVREFY  +         +    V  S   IN IF +  P+  H    + I  P                              L P   
Subjt:  CAHPQEVVVPLVREFYAGLREESMSLAIVHRKMVSFSSVDINNIFQVKAPL--HPRGNDAIKNPS--------------------------AKQLKPELA

Query:  IGLHFIKNRLMPTTHDITISVERVMLLYSIMKGFKINIG
        +  HF+K+RL+PTTH  T+S E V LLYS++ G  IN+G
Subjt:  IGLHFIKNRLMPTTHDITISVERVMLLYSIMKGFKINIG

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.1e-0933.81Show/hide
Query:  CAHPQEVVVPLVREFYAGLREESMSLAIVHRKMVSFSSVDINNIFQVKAPLHPRG--------NDAIK------------NPSAK--------QLKPELA
        CAHP++ +VPLVREFYA L +   +   V    VS+S   IN +F +  P+            +D I             N SA+         L P   
Subjt:  CAHPQEVVVPLVREFYAGLREESMSLAIVHRKMVSFSSVDINNIFQVKAPLHPRG--------NDAIK------------NPSAK--------QLKPELA

Query:  IGLHFIKNRLMPTTHDITISVERVMLLYSIMKGFKINIG
        +  HF+K+ L+PTTH  T+S +R++LL+S++ G  IN+G
Subjt:  IGLHFIKNRLMPTTHDITISVERVMLLYSIMKGFKINIG

A0A2P5BCG4 Uncharacterized protein (Fragment)2.8e-1033.81Show/hide
Query:  CAHPQEVVVPLVREFYAGLREESMSLAIVHRKMVSFSSVDINNIFQVKAPLHPRGN--------------------DAIKNPSAK--------QLKPELA
        CAHP++ +VPLVREFYA L +   +   V    VS+S   IN +F +  P+                          A  N SA+         L P   
Subjt:  CAHPQEVVVPLVREFYAGLREESMSLAIVHRKMVSFSSVDINNIFQVKAPLHPRGN--------------------DAIKNPSAK--------QLKPELA

Query:  IGLHFIKNRLMPTTHDITISVERVMLLYSIMKGFKINIG
        +  HF+K+RL+PTTH  T+S +R++LL+S++ G  IN+G
Subjt:  IGLHFIKNRLMPTTHDITISVERVMLLYSIMKGFKINIG

A0A2P5DAQ2 Uncharacterized protein8.2e-1032.37Show/hide
Query:  CAHPQEVVVPLVREFYAGLREESMSLAIVHRKMVSFSSVDINNIFQVKAPL--HPRGNDAIKNPS--------------------------AKQLKPELA
        CAHP++ +VPLVREFY  +         +    V  S   IN IF +  P+  H    + I  P                              L P   
Subjt:  CAHPQEVVVPLVREFYAGLREESMSLAIVHRKMVSFSSVDINNIFQVKAPL--HPRGNDAIKNPS--------------------------AKQLKPELA

Query:  IGLHFIKNRLMPTTHDITISVERVMLLYSIMKGFKINIG
        +  HF+K+RL+PTTH  T+S E V LLYS++ G  IN+G
Subjt:  IGLHFIKNRLMPTTHDITISVERVMLLYSIMKGFKINIG

A0A6A3B6J9 RT_RNaseH_2 domain-containing protein4.5e-0832.11Show/hide
Query:  HPQEVVVPLVREFYAGLREESMSLAIVHRKMVSFSSVDINNIFQVKAPLHPRGNDAIKNPSAKQLKPELAIGLHFIKNRLMPTTHDITISVERVMLLYSI
        HP  V   LV+EFY+ + E +    +VH   + F+   IN  F+++          +      +L P + +  HF+K++L+PT+H+ T+S +R++LL+SI
Subjt:  HPQEVVVPLVREFYAGLREESMSLAIVHRKMVSFSSVDINNIFQVKAPLHPRGNDAIKNPSAKQLKPELAIGLHFIKNRLMPTTHDITISVERVMLLYSI

Query:  MKGFKINIG
        + G  I+IG
Subjt:  MKGFKINIG

W9QTD9 Uncharacterized protein2.6e-0833.33Show/hide
Query:  CAHPQEVVVPLVREFYAGLREESMSLAIVHRKMVSFSSVDINNIF----------------------QVKAPLHPRGNDAIKNPSA------KQLKPELA
        C HP   +VPLVREFYA L + +     V    V F++  IN+IF                       V A +   G     +P        K+LK    
Subjt:  CAHPQEVVVPLVREFYAGLREESMSLAIVHRKMVSFSSVDINNIF----------------------QVKAPLHPRGNDAIKNPSA------KQLKPELA

Query:  IGLHFIKNRLMPTTHDITISVERVMLLYSIMKGFKINI
        I  HF+  R MP+TH  T++ +RV+LLYSI+ G  +NI
Subjt:  IGLHFIKNRLMPTTHDITISVERVMLLYSIMKGFKINI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGAATTTGTGCTCACCCACAAGAGGTCGTCGTGCCTCTAGTCCGAGAGTTTTATGCAGGGTTGAGGGAGGAGAGCATGAGCTTGGCAATAGTGCACAGGAAGAT
GGTAAGCTTTTCTTCCGTTGATATAAACAATATTTTTCAGGTCAAAGCGCCTTTGCACCCGAGAGGGAATGATGCTATAAAGAACCCCTCGGCCAAGCAATTGAAGCCTG
AACTGGCAATTGGGCTCCACTTTATCAAGAATAGGTTGATGCCCACCACCCATGACATCACTATTTCAGTAGAGAGGGTCATGCTTCTTTACAGTATAATGAAGGGGTTC
AAGATCAACATTGGGGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGGAATTTGTGCTCACCCACAAGAGGTCGTCGTGCCTCTAGTCCGAGAGTTTTATGCAGGGTTGAGGGAGGAGAGCATGAGCTTGGCAATAGTGCACAGGAAGAT
GGTAAGCTTTTCTTCCGTTGATATAAACAATATTTTTCAGGTCAAAGCGCCTTTGCACCCGAGAGGGAATGATGCTATAAAGAACCCCTCGGCCAAGCAATTGAAGCCTG
AACTGGCAATTGGGCTCCACTTTATCAAGAATAGGTTGATGCCCACCACCCATGACATCACTATTTCAGTAGAGAGGGTCATGCTTCTTTACAGTATAATGAAGGGGTTC
AAGATCAACATTGGGGCATAA
Protein sequenceShow/hide protein sequence
MAGICAHPQEVVVPLVREFYAGLREESMSLAIVHRKMVSFSSVDINNIFQVKAPLHPRGNDAIKNPSAKQLKPELAIGLHFIKNRLMPTTHDITISVERVMLLYSIMKGF
KINIGA