; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028382 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028382
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr8:20034340..20035618
RNA-Seq ExpressionLag0028382
SyntenyLag0028382
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFY87157.1 hypothetical protein Acr_05g0007960 [Actinidia rufa]9.4e-2934.51Show/hide
Query:  HLDAYQTWMDFHGTNEATRCRAFALTL---------------TVKQGPRESLKDYIKRFSNEVLQVEGYDDGVALTAVILGLQDERLLNSIGESQPRTYV
        HLD+Y++ M   G ++   C+AF+ TL               TV Q   ESLKD++KRF+  +L+VE   D V + A++ GL+   L +S+ ++ P T  
Subjt:  HLDAYQTWMDFHGTNEATRCRAFALTL---------------TVKQGPRESLKDYIKRFSNEVLQVEGYDDGVALTAVILGLQDERLLNSIGESQPRTYV

Query:  EFMTRAQRYISAEELLRSKQVERE----------SRRVTISNRHREDRGKRHHVEGRGRRPTRGPR----AVGP-----CETKSQIQQDTNLLKRPEKLR
           ++A +YI+AEEL  +K+  RE          +RR       R  R  R H     RRP   PR     + P      +  S+I+ +   +K P K++
Subjt:  EFMTRAQRYISAEELLRSKQVERE----------SRRVTISNRHREDRGKRHHVEGRGRRPTRGPR----AVGP-----CETKSQIQQDTNLLKRPEKLR

Query:  SDPDRRNINKYYMFHGDHSHTTQECIQLRDEIEALIREGYLKEFVGNDRSKRPLP
        +DP +RN NKY  FH DH H T++C QL+++I  LI+ GYL+++V N    RP P
Subjt:  SDPDRRNINKYYMFHGDHSHTTQECIQLRDEIEALIREGYLKEFVGNDRSKRPLP

MQL69050.1 hypothetical protein [Colocasia esculenta]8.8e-2735.46Show/hide
Query:  IGQHLDAYQTWMDFHGTNEATRCRAF------------------ALTLTVKQGPRESLKDYIKRFSNEVLQVEGYDDGVALTAVILGLQDERLLNSIGES
        +  H+  +++ M FHG ++A +CRAF                  A  L V+Q   E+L D++KRF  E L +   D  +A +A+I G +D  L  ++G  
Subjt:  IGQHLDAYQTWMDFHGTNEATRCRAF------------------ALTLTVKQGPRESLKDYIKRFSNEVLQVEGYDDGVALTAVILGLQDERLLNSIGES

Query:  QPRTYVEFMTRAQRYISAEELL---RSKQVERESRRVTISNRHREDR--GKRHHVEGRGRRPTRG--PRAVGPCETKSQIQQDTNLLKRPEKLRSDPDRR
        Q  T  E ++ AQR+ + EE L   R++Q E+  ++    N    DR  G+R+    R  RP     P  V P +  ++I+ +   ++ P+++RSDP RR
Subjt:  QPRTYVEFMTRAQRYISAEELL---RSKQVERESRRVTISNRHREDR--GKRHHVEGRGRRPTRG--PRAVGPCETKSQIQQDTNLLKRPEKLRSDPDRR

Query:  NINKYYMFHGDHSHTTQECIQLRDEIEALIREGYLKEFVGNDRSKRPLPRE
        + NKY  FH DH H T EC QL+DEIE LI+ GYL +FV  +   RP  RE
Subjt:  NINKYYMFHGDHSHTTQECIQLRDEIEALIREGYLKEFVGNDRSKRPLPRE

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]4.1e-3233.57Show/hide
Query:  HLDAYQTWMDFHGTNEATRCRAFALT--------------------------------------------LTVKQGPRESLKDYIKRFSNEVLQVEGYDD
        HLDAY+ WMD +G +EA RCR F+ T                                            LT+KQ   ESL+DY+ RF+ E LQVEG  D
Subjt:  HLDAYQTWMDFHGTNEATRCRAFALT--------------------------------------------LTVKQGPRESLKDYIKRFSNEVLQVEGYDD

Query:  GVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLRSKQVERESRRVTISNRHREDRGKRHHVEGRGRRPTRGP--------RAVGPCET
         V+L A + G++DE L  S G+  P T+ E ++RAQRY+SA E   SK+ E + +R         D+ +    E R R   + P            P E 
Subjt:  GVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLRSKQVERESRRVTISNRHREDRGKRHHVEGRGRRPTRGP--------RAVGPCET

Query:  KSQIQQDTNLLKRPEKLRSDPDRRNINKYYMFHGDHSHTTQECIQLRDEIEALIREGYLKEFVGNDRSKRPLPREMVEAEHLR
             +D  LLK PE++++   +R+  +Y +FH DH H TQ+C  L++E+E LIR GYLKE+V   ++ +    +   A  +R
Subjt:  KSQIQQDTNLLKRPEKLRSDPDRRNINKYYMFHGDHSHTTQECIQLRDEIEALIREGYLKEFVGNDRSKRPLPREMVEAEHLR

XP_024041095.1 uncharacterized protein LOC112098853 [Citrus clementina]3.6e-2831.62Show/hide
Query:  QHLDAYQTWMDFHGTNEATRCRAFALT--------------------------------------------LTVKQGPRESLKDYIKRFSNEVLQVEGYD
        +HL+ Y+T M+  G ++A  CRAF LT                                            LTVKQ   E+L+DYI+R++NE+ QV+GYD
Subjt:  QHLDAYQTWMDFHGTNEATRCRAFALT--------------------------------------------LTVKQGPRESLKDYIKRFSNEVLQVEGYD

Query:  DGVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLRSKQVERESRRVTISNRHREDRGKRHHV-----------------EGRGRRPTR
        DG+AL+ ++ GL+  +L  S+ +  P +Y E + RA++Y +AEE  R K   +E    T   + ++D+ +R  V                 E R  RP  
Subjt:  DGVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLRSKQVERESRRVTISNRHREDRGKRHHV-----------------EGRGRRPTR

Query:  GPRAVGPCETKSQIQQ------DTNLLKRPEKLRSDPDRRNINKYYMFHGDHSHTTQECIQLRDEIEALIREGYLKEFVGN--DRSKRPLP
          +     E  +  +Q      +  L + P  ++++P RRN NKY  FH DH H T EC +L+++IE+L+R+G L+E+V N  DR K   P
Subjt:  GPRAVGPCETKSQIQQ------DTNLLKRPEKLRSDPDRRNINKYYMFHGDHSHTTQECIQLRDEIEALIREGYLKEFVGN--DRSKRPLP

XP_024042801.1 uncharacterized protein LOC112099618 [Citrus clementina]3.6e-2832.1Show/hide
Query:  QHLDAYQTWMDFHGTNEATRCRAFALT--------------------------------------------LTVKQGPRESLKDYIKRFSNEVLQVEGYD
        +HL  Y++WM+  G + A  CRAF+LT                                            L VKQG  ESLKD I RF+ EV++VE Y 
Subjt:  QHLDAYQTWMDFHGTNEATRCRAFALT--------------------------------------------LTVKQGPRESLKDYIKRFSNEVLQVEGYD

Query:  DGVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLRSKQ-VERESRRVTISNRHREDRGKRHHVEGRGRRPTRGPRAVG----------
        D VALT +++GLQ  +   S+ ++  RT+ E ++RAQ+Y + +EL  +K+    +S RV    + +E++ K  + E   R   +GP+ +           
Subjt:  DGVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLRSKQ-VERESRRVTISNRHREDRGKRHHVEGRGRRPTRGPRAVG----------

Query:  -PCETKSQIQQDTNLLKRPEKLRSDPDRRNINKYYMFHGDHSHTTQECIQLRDEIEALIREGYLKEFVGND
         P E      ++ +LL++P+ ++  P+RR+ +KY  +H DH H  ++C  L++EI++LI+ GYLKEFV  D
Subjt:  -PCETKSQIQQDTNLLKRPEKLRSDPDRRNINKYYMFHGDHSHTTQECIQLRDEIEALIREGYLKEFVGND

TrEMBL top hitse value%identityAlignment
A0A6J1DWY0 uncharacterized protein LOC1110252932.0e-3233.57Show/hide
Query:  HLDAYQTWMDFHGTNEATRCRAFALT--------------------------------------------LTVKQGPRESLKDYIKRFSNEVLQVEGYDD
        HLDAY+ WMD +G +EA RCR F+ T                                            LT+KQ   ESL+DY+ RF+ E LQVEG  D
Subjt:  HLDAYQTWMDFHGTNEATRCRAFALT--------------------------------------------LTVKQGPRESLKDYIKRFSNEVLQVEGYDD

Query:  GVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLRSKQVERESRRVTISNRHREDRGKRHHVEGRGRRPTRGP--------RAVGPCET
         V+L A + G++DE L  S G+  P T+ E ++RAQRY+SA E   SK+ E + +R         D+ +    E R R   + P            P E 
Subjt:  GVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLRSKQVERESRRVTISNRHREDRGKRHHVEGRGRRPTRGP--------RAVGPCET

Query:  KSQIQQDTNLLKRPEKLRSDPDRRNINKYYMFHGDHSHTTQECIQLRDEIEALIREGYLKEFVGNDRSKRPLPREMVEAEHLR
             +D  LLK PE++++   +R+  +Y +FH DH H TQ+C  L++E+E LIR GYLKE+V   ++ +    +   A  +R
Subjt:  KSQIQQDTNLLKRPEKLRSDPDRRNINKYYMFHGDHSHTTQECIQLRDEIEALIREGYLKEFVGNDRSKRPLPREMVEAEHLR

A0A7J0DEJ4 Uncharacterized protein1.0e-2532.33Show/hide
Query:  HLDAYQTWMDFHGTNEATRCRAFALTL---------------TVKQGPRESLKDYIKRFSNEVLQVEGYDDGVALTAVILGLQDERLLNSIGESQPRTYV
        HLD+Y++ M   G ++   C+AF+ TL               TV Q   ESLKD++KRF+  VL+VE   D V      +GLQ   L +S+ ++ P T  
Subjt:  HLDAYQTWMDFHGTNEATRCRAFALTL---------------TVKQGPRESLKDYIKRFSNEVLQVEGYDDGVALTAVILGLQDERLLNSIGESQPRTYV

Query:  EFMTRAQRYISAEELLRSKQVER----------ESRRVTISNRHREDRGKRHHVEGRGRRPTRGPRAVG---------PCETKSQIQQDTNLLKRPEKLR
           ++A +YI+AEEL ++K+  R          ++RR       R  R  R       RRP   PR +            +  S+I+ +   +K P K++
Subjt:  EFMTRAQRYISAEELLRSKQVER----------ESRRVTISNRHREDRGKRHHVEGRGRRPTRGPRAVG---------PCETKSQIQQDTNLLKRPEKLR

Query:  SDPDRRNINKYYMFHGDHSHTTQECIQLRDEIEALIREGYLKEFVGNDRSKRPLPREMVEAEHLRD
        +DP +RN NKY  FH DH H T++C QL+++I  LI+ GYL+++V        L R   + + L D
Subjt:  SDPDRRNINKYYMFHGDHSHTTQECIQLRDEIEALIREGYLKEFVGNDRSKRPLPREMVEAEHLRD

A0A7J0ENK2 Uncharacterized protein4.5e-2934.51Show/hide
Query:  HLDAYQTWMDFHGTNEATRCRAFALTL---------------TVKQGPRESLKDYIKRFSNEVLQVEGYDDGVALTAVILGLQDERLLNSIGESQPRTYV
        HLD+Y++ M   G ++   C+AF+ TL               TV Q   ESLKD++KRF+  +L+VE   D V + A++ GL+   L +S+ ++ P T  
Subjt:  HLDAYQTWMDFHGTNEATRCRAFALTL---------------TVKQGPRESLKDYIKRFSNEVLQVEGYDDGVALTAVILGLQDERLLNSIGESQPRTYV

Query:  EFMTRAQRYISAEELLRSKQVERE----------SRRVTISNRHREDRGKRHHVEGRGRRPTRGPR----AVGP-----CETKSQIQQDTNLLKRPEKLR
           ++A +YI+AEEL  +K+  RE          +RR       R  R  R H     RRP   PR     + P      +  S+I+ +   +K P K++
Subjt:  EFMTRAQRYISAEELLRSKQVERE----------SRRVTISNRHREDRGKRHHVEGRGRRPTRGPR----AVGP-----CETKSQIQQDTNLLKRPEKLR

Query:  SDPDRRNINKYYMFHGDHSHTTQECIQLRDEIEALIREGYLKEFVGNDRSKRPLP
        +DP +RN NKY  FH DH H T++C QL+++I  LI+ GYL+++V N    RP P
Subjt:  SDPDRRNINKYYMFHGDHSHTTQECIQLRDEIEALIREGYLKEFVGNDRSKRPLP

A0A7J0F521 Uncharacterized protein4.7e-2632.55Show/hide
Query:  HLDAYQTWMDFHGTNEATRCRAFALTL---------------TVKQGPRESLKDYIKRFSNEVLQVEGYDDGVALTAVILGLQDERLLNSIGESQPRTYV
        HLD+Y++ M   G ++   C+AF+ TL               TV Q   ESLKD++KRF+  +L+VE   D V + A++ GL+   L +S+ ++ P T  
Subjt:  HLDAYQTWMDFHGTNEATRCRAFALTL---------------TVKQGPRESLKDYIKRFSNEVLQVEGYDDGVALTAVILGLQDERLLNSIGESQPRTYV

Query:  EFMTRAQRYISAEELLRSKQVER----------ESRRVTISNRHREDRGKRHHVEGRGRRPTRGPRAVG---------PCETKSQIQQDTNLLKRPEKLR
           ++A +YI+AEEL  +K+  R          ++RR       R  R  R       RRP   P  +            +  S+I+ +   +K P K++
Subjt:  EFMTRAQRYISAEELLRSKQVER----------ESRRVTISNRHREDRGKRHHVEGRGRRPTRGPRAVG---------PCETKSQIQQDTNLLKRPEKLR

Query:  SDPDRRNINKYYMFHGDHSHTTQECIQLRDEIEALIREGYLKEFVGNDRSKRPLP
        +DP +RN NKY  FH DH H T++C QL+++I  LI+ GYL+++V +    RP P
Subjt:  SDPDRRNINKYYMFHGDHSHTTQECIQLRDEIEALIREGYLKEFVGNDRSKRPLP

A0A7J0FD18 Ribonuclease H9.5e-2732.16Show/hide
Query:  HLDAYQTWMDFHGTNEATRCRAFALTL---------------TVKQGPRESLKDYIKRFSNEVLQVEGYDDGVALTAVILGLQDERLLNSIGESQPRTYV
        HLD+Y++ M   G ++   C+AF+ TL               T+ Q   ESLK+++KRF+  +L+VE   D V + A++ GL+   L +S+ ++ P T  
Subjt:  HLDAYQTWMDFHGTNEATRCRAFALTL---------------TVKQGPRESLKDYIKRFSNEVLQVEGYDDGVALTAVILGLQDERLLNSIGESQPRTYV

Query:  EFMTRAQRYISAEELLRSKQVER----------ESRRVTI---SNRHREDRGKRHHVEGRGRRPTRGPRAVGP------CETKSQIQQDTNLLKRPEKLR
           ++A +YI+AEEL  +K+  R          ++RR      +   R DR  +     R R P R P+ + P       +  S+I+ +   +K P K++
Subjt:  EFMTRAQRYISAEELLRSKQVER----------ESRRVTI---SNRHREDRGKRHHVEGRGRRPTRGPRAVGP------CETKSQIQQDTNLLKRPEKLR

Query:  SDPDRRNINKYYMFHGDHSHTTQECIQLRDEIEALIREGYLKEFVGNDRSKRPLP
        ++P +RN NKY  FH DH H T++C QLR++I  LI+ GYL++++    + RP P
Subjt:  SDPDRRNINKYYMFHGDHSHTTQECIQLRDEIEALIREGYLKEFVGNDRSKRPLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCTCTCGGGGGCGACCAAACCCAGAAGGAAGCTGGACCAAGCCACAAAAAGACCCGCAGGAATTTTCCGCTAAAGACAATACCAGGTACGTACATAGGGAATCA
TGACAGGAAAAAGTTGGAGGCTCGGGCAAAGTCCGAGGCCGAGCAGGGCCAAATGAGACGAGAGCCATCCAAGTGGCTAAAAGAAGAAGATAGTTACCAAACCTCCCAAA
AGAGGACAGAGAACGAGGACATAGAAGGGCTAATTGGGCAGCACCTAGATGCATACCAAACCTGGATGGACTTTCACGGCACGAACGAAGCGACAAGGTGCCGAGCCTTT
GCACTAACACTCACAGTAAAGCAGGGGCCCCGGGAAAGCCTGAAGGATTATATTAAAAGATTTAGTAACGAAGTTTTGCAGGTGGAAGGTTACGACGATGGGGTCGCCTT
GACTGCTGTGATTTTAGGTTTGCAGGATGAGAGGCTGCTCAACTCAATCGGAGAGAGCCAACCACGAACGTATGTGGAGTTTATGACCCGAGCACAAAGGTACATAAGCG
CCGAGGAACTATTGAGATCCAAACAGGTGGAAAGAGAGAGTCGAAGGGTGACAATATCAAACCGGCATCGAGAAGACAGGGGAAAGAGACACCATGTCGAGGGAAGAGGC
CGGAGGCCGACCAGAGGCCCAAGAGCCGTAGGGCCGTGCGAAACCAAAAGCCAGATTCAACAGGACACGAATCTGTTGAAACGCCCAGAAAAATTGAGATCAGATCCCGA
CAGGAGGAACATAAACAAATACTACATGTTCCATGGAGACCACAGTCACACAACCCAGGAATGCATACAATTGAGGGACGAGATAGAAGCCCTAATTAGAGAAGGTTACC
TCAAGGAGTTCGTGGGGAATGACAGAAGCAAAAGGCCACTACCTCGGGAGATGGTCGAGGCTGAGCATTTGAGGGATCAAGCTATCCCCTTCCAATGGAGCATTGATTTC
TTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCCTCTCGGGGGCGACCAAACCCAGAAGGAAGCTGGACCAAGCCACAAAAAGACCCGCAGGAATTTTCCGCTAAAGACAATACCAGGTACGTACATAGGGAATCA
TGACAGGAAAAAGTTGGAGGCTCGGGCAAAGTCCGAGGCCGAGCAGGGCCAAATGAGACGAGAGCCATCCAAGTGGCTAAAAGAAGAAGATAGTTACCAAACCTCCCAAA
AGAGGACAGAGAACGAGGACATAGAAGGGCTAATTGGGCAGCACCTAGATGCATACCAAACCTGGATGGACTTTCACGGCACGAACGAAGCGACAAGGTGCCGAGCCTTT
GCACTAACACTCACAGTAAAGCAGGGGCCCCGGGAAAGCCTGAAGGATTATATTAAAAGATTTAGTAACGAAGTTTTGCAGGTGGAAGGTTACGACGATGGGGTCGCCTT
GACTGCTGTGATTTTAGGTTTGCAGGATGAGAGGCTGCTCAACTCAATCGGAGAGAGCCAACCACGAACGTATGTGGAGTTTATGACCCGAGCACAAAGGTACATAAGCG
CCGAGGAACTATTGAGATCCAAACAGGTGGAAAGAGAGAGTCGAAGGGTGACAATATCAAACCGGCATCGAGAAGACAGGGGAAAGAGACACCATGTCGAGGGAAGAGGC
CGGAGGCCGACCAGAGGCCCAAGAGCCGTAGGGCCGTGCGAAACCAAAAGCCAGATTCAACAGGACACGAATCTGTTGAAACGCCCAGAAAAATTGAGATCAGATCCCGA
CAGGAGGAACATAAACAAATACTACATGTTCCATGGAGACCACAGTCACACAACCCAGGAATGCATACAATTGAGGGACGAGATAGAAGCCCTAATTAGAGAAGGTTACC
TCAAGGAGTTCGTGGGGAATGACAGAAGCAAAAGGCCACTACCTCGGGAGATGGTCGAGGCTGAGCATTTGAGGGATCAAGCTATCCCCTTCCAATGGAGCATTGATTTC
TTTTGA
Protein sequenceShow/hide protein sequence
MPPLGGDQTQKEAGPSHKKTRRNFPLKTIPGTYIGNHDRKKLEARAKSEAEQGQMRREPSKWLKEEDSYQTSQKRTENEDIEGLIGQHLDAYQTWMDFHGTNEATRCRAF
ALTLTVKQGPRESLKDYIKRFSNEVLQVEGYDDGVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLRSKQVERESRRVTISNRHREDRGKRHHVEGRG
RRPTRGPRAVGPCETKSQIQQDTNLLKRPEKLRSDPDRRNINKYYMFHGDHSHTTQECIQLRDEIEALIREGYLKEFVGNDRSKRPLPREMVEAEHLRDQAIPFQWSIDF
F