; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028383 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028383
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr8:20035760..20036464
RNA-Seq ExpressionLag0028383
SyntenyLag0028383
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR017956 - AT hook, DNA-binding motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A5F8H749 Uncharacterized protein2.2e-0622.77Show/hide
Query:  TLFWGKGLGRGRKFPSLSSSIVGILGVLTLFWGKSLGRPRKFSGLSSSVAVIPGVRTLFWGKGLGRPRNFPSLSSSIVVILRVLTLFWEKGLRMPTKFSG
        +L + K +       +L + I  +  V +L   K++      S L + +  +P VR+L + K    P    +L + I  +  V +L + K   +    S 
Subjt:  TLFWGKGLGRGRKFPSLSSSIVGILGVLTLFWGKSLGRPRKFSGLSSSVAVIPGVRTLFWGKGLGRPRNFPSLSSSIVVILRVLTLFWEKGLRMPTKFSG

Query:  LSSSIMVILGVCTLFWGKGLGRPRKFPSLSSSIVVIPRVLTLFWGKGLGMPKKFSGLSLSVAVIPGVRTLFWGKGLGRLRKFPSLSSSIVIIPEVLTLFW
        L + I  +  V +L   K +     F +L + I  +P V +L + K + +P+  S L   +  +P V +L + K         +L + I  +P V +L +
Subjt:  LSSSIMVILGVCTLFWGKGLGRPRKFPSLSSSIVVIPRVLTLFWGKGLGMPKKFSGLSLSVAVIPGVRTLFWGKGLGRLRKFPSLSSSIVIIPEVLTLFW

Query:  GK
         K
Subjt:  GK
A0A6P7VG52 uncharacterized protein LOC1153223013.7e-0927.06Show/hide
Query:  FWGKGLGRGRKFPSLSSSIVGILGVLTLFWGKSLGRPRKFSGLSSSVAVIPGVRTLFWGKGLGRPRNFPSLSSSIVVILRVLTLFWEKGLRMPTKFSGLS
        F GK LG       L +++  I+     F GKSLG       L ++V  I   +  F GK LG       L +++  I+        KGL        L 
Subjt:  FWGKGLGRGRKFPSLSSSIVGILGVLTLFWGKSLGRPRKFSGLSSSVAVIPGVRTLFWGKGLGRPRNFPSLSSSIVVILRVLTLFWEKGLRMPTKFSGLS

Query:  SSIMVILGVCTLFWGKGLGRPRKFPSLSSSIVVIPRVLTLFWGKGLGMPKKFSGLSLSVAVIPGVRTLFWGKGLGRLRKFPSLSSSIVIIPEVLTLFWGK
        +++  I+   + F GKGLG       L +++  I    + F GK LG       L  +V  I   +     KGLG       L +++  I +  + F GK
Subjt:  SSIMVILGVCTLFWGKGLGRPRKFPSLSSSIVVIPRVLTLFWGKGLGMPKKFSGLSLSVAVIPGVRTLFWGKGLGRLRKFPSLSSSIVIIPEVLTLFWGK

Query:  GLGRPRKFSGLSSRIVVI
        GLG    F  L + +  I
Subjt:  GLGRPRKFSGLSSRIVVI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCATCCTAGGGGTGCGTACACTCTTCTGGGGAAAAGGCTTGGGGAGGGGTAGGAAGTTCCCGAGCCTCTCTTCAAGTATTGTGGGCATCCTAGGGGTGCTTACACT
CTTCTGGGGAAAAAGCTTAGGGAGGCCTAGGAAGTTCTCGGGCCTCTCTTCAAGCGTCGCGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGGGTTGGGGAGGC
CTAGGAACTTCCCGAGCCTCTCTTCAAGTATCGTGGTCATCCTAAGGGTGCTTACACTCTTCTGGGAAAAAGGCTTGCGGATGCCTACGAAGTTCTCGGGCCTCTCTTCA
AGCATCATGGTCATCCTAGGGGTGTGTACACTCTTCTGGGGAAAAGGCTTGGGGAGGCCTAGGAAGTTCCCGAGCCTCTCTTCAAGTATTGTGGTCATCCCAAGGGTGCT
TACACTCTTCTGGGGAAAAGGCTTGGGGATGCCTAAGAAGTTCTCGGGCCTTTCTTTAAGCGTCGCAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGGCTTGG
GGAGGCTTAGGAAGTTCCCGAGCCTCTCTTCAAGTATCGTGATCATCCCAGAGGTGCTTACACTCTTCTGGGGAAAAGGCTTGGGGAGGCCTAGGAAGTTCTCGGGCCTC
TCTTCAAGAATCGTGGTCATCCCATGGGTGCTTACACTCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCATCCTAGGGGTGCGTACACTCTTCTGGGGAAAAGGCTTGGGGAGGGGTAGGAAGTTCCCGAGCCTCTCTTCAAGTATTGTGGGCATCCTAGGGGTGCTTACACT
CTTCTGGGGAAAAAGCTTAGGGAGGCCTAGGAAGTTCTCGGGCCTCTCTTCAAGCGTCGCGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGGGTTGGGGAGGC
CTAGGAACTTCCCGAGCCTCTCTTCAAGTATCGTGGTCATCCTAAGGGTGCTTACACTCTTCTGGGAAAAAGGCTTGCGGATGCCTACGAAGTTCTCGGGCCTCTCTTCA
AGCATCATGGTCATCCTAGGGGTGTGTACACTCTTCTGGGGAAAAGGCTTGGGGAGGCCTAGGAAGTTCCCGAGCCTCTCTTCAAGTATTGTGGTCATCCCAAGGGTGCT
TACACTCTTCTGGGGAAAAGGCTTGGGGATGCCTAAGAAGTTCTCGGGCCTTTCTTTAAGCGTCGCAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGGCTTGG
GGAGGCTTAGGAAGTTCCCGAGCCTCTCTTCAAGTATCGTGATCATCCCAGAGGTGCTTACACTCTTCTGGGGAAAAGGCTTGGGGAGGCCTAGGAAGTTCTCGGGCCTC
TCTTCAAGAATCGTGGTCATCCCATGGGTGCTTACACTCTTCTAG
Protein sequenceShow/hide protein sequence
MVILGVRTLFWGKGLGRGRKFPSLSSSIVGILGVLTLFWGKSLGRPRKFSGLSSSVAVIPGVRTLFWGKGLGRPRNFPSLSSSIVVILRVLTLFWEKGLRMPTKFSGLSS
SIMVILGVCTLFWGKGLGRPRKFPSLSSSIVVIPRVLTLFWGKGLGMPKKFSGLSLSVAVIPGVRTLFWGKGLGRLRKFPSLSSSIVIIPEVLTLFWGKGLGRPRKFSGL
SSRIVVIPWVLTLF