; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028400 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028400
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:20712239..20713666
RNA-Seq ExpressionLag0028400
SyntenyLag0028400
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB49850.1 hypothetical protein L484_000844 [Morus notabilis]6.8e-2128.74Show/hide
Query:  RFVNDLARAKYQE-VLKRDFLFERGF------GSDLPRFLESGIVNLGWRKFCAKPEPVNSNIVREFYANLDVKNDFEDFPHAV----------------
        +FV++ A  +Y+E +  R+ + E+GF          P F+   I++ GW+ FC  P      +V+EFYANL  +     F   +                
Subjt:  RFVNDLARAKYQE-VLKRDFLFERGF------GSDLPRFLESGIVNLGWRKFCAKPEPVNSNIVREFYANLDVKNDFEDFPHAV----------------

Query:  -----FNEMVVAPSSDQLSAAVREVGIEGAQWRVSQTQKHTFQAAYLKSEANTWMSFIRLRLLQTTHGSTVSRDRVLLAFAILRSMSIDVGKIISSEIVD
             F E++     +QL   ++ + I GAQW +S    +T     L+  A  W  F+  RLL +THG T+SR+R +L +A+L    I+VG++I  +I  
Subjt:  -----FNEMVVAPSSDQLSAAVREVGIEGAQWRVSQTQKHTFQAAYLKSEANTWMSFIRLRLLQTTHGSTVSRDRVLLAFAILRSMSIDVGKIISSEIVD

Query:  CWKKKVGKLFFPKTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLARL
        C +K  G L+FP  I+ LC ++ V     +  + + G +D   + R+
Subjt:  CWKKKVGKLFFPKTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLARL

EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]8.9e-2132.3Show/hide
Query:  PRFLESGIVNLGWRKFCAKPEPVNSNIVREFYANL-----------------------------DVKNDFEDFPHAVFNEMVVAPSSDQLSAAVREVGIE
        P F+   I   GWR+FC  P      +VREFYANL                             +V +++ DF   V +E        QL   + EV IE
Subjt:  PRFLESGIVNLGWRKFCAKPEPVNSNIVREFYANL-----------------------------DVKNDFEDFPHAVFNEMVVAPSSDQLSAAVREVGIE

Query:  GAQWRVSQTQKHTFQAAYLKSEANTWMSFIRLRLLQTTHGSTVSRDRVLLAFAILRSMSIDVGKIISSEIVDC-WKKKVGKLFFPKTITMLCSRAGVPTV
        GA W++S    +T     LK  A  W  F+  R + +THG TV++DRVLL ++IL  +S+++ +I   EI  C   +K G L+FP  IT L  +A VP  
Subjt:  GAQWRVSQTQKHTFQAAYLKSEANTWMSFIRLRLLQTTHGSTVSRDRVLLAFAILRSMSIDVGKIISSEIVDC-WKKKVGKLFFPKTITMLCSRAGVPTV

Query:  PEDMIMTDKGIIDTPNLARLQRMQEV
         ++ I+ + G I T +++R+ + + V
Subjt:  PEDMIMTDKGIIDTPNLARLQRMQEV

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.3e-2434.14Show/hide
Query:  IRFVNDLARAKYQ-EVLKRDFLFERGFGSD-------LPRFLESGIVNLGWRKFCAKPEPVNSNIVREFYANL--DVKNDF----------EDFPHAVF-
        ++F  + A  +Y+  +  R    E+GF  D       LP F+   I    W++FCA PE     +VREFYANL   V+N            E+  +AVF 
Subjt:  IRFVNDLARAKYQ-EVLKRDFLFERGFGSD-------LPRFLESGIVNLGWRKFCAKPEPVNSNIVREFYANL--DVKNDF----------EDFPHAVF-

Query:  --------NEMVVAPSSDQLSAAVREVGIEGAQWRVSQTQKHTFQAAYLKSEANTWMSFIRLRLLQTTHGSTVSRDRVLLAFAILRSMSIDVGKIISSEI
                +E +   +   L   +  V + GA+W VS    +T   + L   A  W  F++  LL TTHG TVS+DR+LL  ++L   SI+VG++I SEI
Subjt:  --------NEMVVAPSSDQLSAAVREVGIEGAQWRVSQTQKHTFQAAYLKSEANTWMSFIRLRLLQTTHGSTVSRDRVLLAFAILRSMSIDVGKIISSEI

Query:  VDCWKKKVGKLFFPKTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLARL
          C  +K G LFFP  IT LC  A  P +  +  + + G ID   +AR+
Subjt:  VDCWKKKVGKLFFPKTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLARL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.8e-2430.7Show/hide
Query:  IRFVNDLARAKYQ-EVLKRDFLFERGFGSD-------LPRFLESGIVNLGWRKFCAKPEPVNSNIVREFYANLDVKND------------FEDFPHAVF-
        ++F  + A  +Y+  +  R    E+GF  D       LP F+   I    W++FCA PE     +VREFYANL    +             E+  +AVF 
Subjt:  IRFVNDLARAKYQ-EVLKRDFLFERGFGSD-------LPRFLESGIVNLGWRKFCAKPEPVNSNIVREFYANLDVKND------------FEDFPHAVF-

Query:  --------NEMVVAPSSDQLSAAVREVGIEGAQWRVSQTQKHTFQAAYLKSEANTWMSFIRLRLLQTTHGSTVSRDRVLLAFAILRSMSIDVGKIISSEI
                +E +   +   L   +  V   GA+W VS    +T   + L   A  W  F++ RLL TTHG TVS+DR+LL  ++L   SI+VG++I SEI
Subjt:  --------NEMVVAPSSDQLSAAVREVGIEGAQWRVSQTQKHTFQAAYLKSEANTWMSFIRLRLLQTTHGSTVSRDRVLLAFAILRSMSIDVGKIISSEI

Query:  VDCWKKKVGKLFFPKTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLARLQR-------MQEVRQGGLVYGVNQ----ILEQLSVLASR------------
          C  +K G LFFP  IT LC  A  P +  +  + + G ID   +AR+ +        Q           N+    IL+QL  L  R            
Subjt:  VDCWKKKVGKLFFPKTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLARLQR-------MQEVRQGGLVYGVNQ----ILEQLSVLASR------------

Query:  --LEFAERQAQTYWTY
          L+   +Q Q +W Y
Subjt:  --LEFAERQAQTYWTY

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]4.0e-2130.09Show/hide
Query:  IRFVNDLARAKYQE-------VLKRDFLFERGFGSDLPRFLESGIVNLGWRKFCAKPEPVNSNIVREFYANLDVKNDFEDFPHAV---------------
        ++F +  A  +Y+E        ++++F+++     + P F+   I+   W+ FCA PE     +VREFY N+   +D   +   V               
Subjt:  IRFVNDLARAKYQE-------VLKRDFLFERGFGSDLPRFLESGIVNLGWRKFCAKPEPVNSNIVREFYANLDVKNDFEDFPHAV---------------

Query:  ------FNEMVVAPSSDQLSAAVREVGIEGAQWRVSQTQKHTFQAAYLKSEANTWMSFIRLRLLQTTHGSTVSRDRVLLAFAILRSMSIDVGKIISSEIV
               +E V   +  +L   +  V I GA+W VS    +T   + L   A  W  F++ RLL TTHG TVS++ V L +++L   SI+VG++I  EI 
Subjt:  ------FNEMVVAPSSDQLSAAVREVGIEGAQWRVSQTQKHTFQAAYLKSEANTWMSFIRLRLLQTTHGSTVSRDRVLLAFAILRSMSIDVGKIISSEIV

Query:  DCWKKKVGKLFFPKTITMLCSRAGVP
         C  +K G LFFP  IT +C     P
Subjt:  DCWKKKVGKLFFPKTITMLCSRAGVP

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.1e-2434.14Show/hide
Query:  IRFVNDLARAKYQ-EVLKRDFLFERGFGSD-------LPRFLESGIVNLGWRKFCAKPEPVNSNIVREFYANL--DVKNDF----------EDFPHAVF-
        ++F  + A  +Y+  +  R    E+GF  D       LP F+   I    W++FCA PE     +VREFYANL   V+N            E+  +AVF 
Subjt:  IRFVNDLARAKYQ-EVLKRDFLFERGFGSD-------LPRFLESGIVNLGWRKFCAKPEPVNSNIVREFYANL--DVKNDF----------EDFPHAVF-

Query:  --------NEMVVAPSSDQLSAAVREVGIEGAQWRVSQTQKHTFQAAYLKSEANTWMSFIRLRLLQTTHGSTVSRDRVLLAFAILRSMSIDVGKIISSEI
                +E +   +   L   +  V + GA+W VS    +T   + L   A  W  F++  LL TTHG TVS+DR+LL  ++L   SI+VG++I SEI
Subjt:  --------NEMVVAPSSDQLSAAVREVGIEGAQWRVSQTQKHTFQAAYLKSEANTWMSFIRLRLLQTTHGSTVSRDRVLLAFAILRSMSIDVGKIISSEI

Query:  VDCWKKKVGKLFFPKTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLARL
          C  +K G LFFP  IT LC  A  P +  +  + + G ID   +AR+
Subjt:  VDCWKKKVGKLFFPKTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLARL

A0A2P5BCG4 Uncharacterized protein (Fragment)1.9e-2430.7Show/hide
Query:  IRFVNDLARAKYQ-EVLKRDFLFERGFGSD-------LPRFLESGIVNLGWRKFCAKPEPVNSNIVREFYANLDVKND------------FEDFPHAVF-
        ++F  + A  +Y+  +  R    E+GF  D       LP F+   I    W++FCA PE     +VREFYANL    +             E+  +AVF 
Subjt:  IRFVNDLARAKYQ-EVLKRDFLFERGFGSD-------LPRFLESGIVNLGWRKFCAKPEPVNSNIVREFYANLDVKND------------FEDFPHAVF-

Query:  --------NEMVVAPSSDQLSAAVREVGIEGAQWRVSQTQKHTFQAAYLKSEANTWMSFIRLRLLQTTHGSTVSRDRVLLAFAILRSMSIDVGKIISSEI
                +E +   +   L   +  V   GA+W VS    +T   + L   A  W  F++ RLL TTHG TVS+DR+LL  ++L   SI+VG++I SEI
Subjt:  --------NEMVVAPSSDQLSAAVREVGIEGAQWRVSQTQKHTFQAAYLKSEANTWMSFIRLRLLQTTHGSTVSRDRVLLAFAILRSMSIDVGKIISSEI

Query:  VDCWKKKVGKLFFPKTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLARLQR-------MQEVRQGGLVYGVNQ----ILEQLSVLASR------------
          C  +K G LFFP  IT LC  A  P +  +  + + G ID   +AR+ +        Q           N+    IL+QL  L  R            
Subjt:  VDCWKKKVGKLFFPKTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLARLQR-------MQEVRQGGLVYGVNQ----ILEQLSVLASR------------

Query:  --LEFAERQAQTYWTY
          L+   +Q Q +W Y
Subjt:  --LEFAERQAQTYWTY

A0A2P5DAQ2 Uncharacterized protein1.9e-2130.09Show/hide
Query:  IRFVNDLARAKYQE-------VLKRDFLFERGFGSDLPRFLESGIVNLGWRKFCAKPEPVNSNIVREFYANLDVKNDFEDFPHAV---------------
        ++F +  A  +Y+E        ++++F+++     + P F+   I+   W+ FCA PE     +VREFY N+   +D   +   V               
Subjt:  IRFVNDLARAKYQE-------VLKRDFLFERGFGSDLPRFLESGIVNLGWRKFCAKPEPVNSNIVREFYANLDVKNDFEDFPHAV---------------

Query:  ------FNEMVVAPSSDQLSAAVREVGIEGAQWRVSQTQKHTFQAAYLKSEANTWMSFIRLRLLQTTHGSTVSRDRVLLAFAILRSMSIDVGKIISSEIV
               +E V   +  +L   +  V I GA+W VS    +T   + L   A  W  F++ RLL TTHG TVS++ V L +++L   SI+VG++I  EI 
Subjt:  ------FNEMVVAPSSDQLSAAVREVGIEGAQWRVSQTQKHTFQAAYLKSEANTWMSFIRLRLLQTTHGSTVSRDRVLLAFAILRSMSIDVGKIISSEIV

Query:  DCWKKKVGKLFFPKTITMLCSRAGVP
         C  +K G LFFP  IT +C     P
Subjt:  DCWKKKVGKLFFPKTITMLCSRAGVP

A0A6A3BU96 Uncharacterized protein4.3e-2127.65Show/hide
Query:  RFVNDLARAKYQEVLKRDFLFERGF-------GSDLPRFLESGIVNLGWRKFCAKPEPVNSNIVREFYANLDVKNDFEDF--------------------
        +F ND A+A++Q    R+  FE GF       G   P  ++  ++ L W KF   P  VN+++V+EFYAN+   N    F                    
Subjt:  RFVNDLARAKYQEVLKRDFLFERGF-------GSDLPRFLESGIVNLGWRKFCAKPEPVNSNIVREFYANLDVKNDFEDF--------------------

Query:  ----PHAVFNEMVVAPSSDQLSAAVREVGIEGAQWRVSQTQKHTFQAAYLKSEANTWMSFIRLRLLQTTHGSTVSRDRVLLAFAILRSMSIDVGKIISSE
             HA+F E      S++    + ++  E  +W   QT +++     L+  A  W  F++ +L+ T+H +TVS  R+LL  +++ S  IDVG+II  +
Subjt:  ----PHAVFNEMVVAPSSDQLSAAVREVGIEGAQWRVSQTQKHTFQAAYLKSEANTWMSFIRLRLLQTTHGSTVSRDRVLLAFAILRSMSIDVGKIISSE

Query:  IVDCWKKKVGKLFFPKTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLARLQRMQEVRQGGLVY----GVNQILEQLSVLASRLEFAERQAQTY
        + DC  KK   L FP  IT LC +  V     D I+     I    L  L  ++  +    V+    G  +   ++ +LA      + QAQ +
Subjt:  IVDCWKKKVGKLFFPKTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLARLQRMQEVRQGGLVY----GVNQILEQLSVLASRLEFAERQAQTY

W9RBS1 Uncharacterized protein3.3e-2128.74Show/hide
Query:  RFVNDLARAKYQE-VLKRDFLFERGF------GSDLPRFLESGIVNLGWRKFCAKPEPVNSNIVREFYANLDVKNDFEDFPHAV----------------
        +FV++ A  +Y+E +  R+ + E+GF          P F+   I++ GW+ FC  P      +V+EFYANL  +     F   +                
Subjt:  RFVNDLARAKYQE-VLKRDFLFERGF------GSDLPRFLESGIVNLGWRKFCAKPEPVNSNIVREFYANLDVKNDFEDFPHAV----------------

Query:  -----FNEMVVAPSSDQLSAAVREVGIEGAQWRVSQTQKHTFQAAYLKSEANTWMSFIRLRLLQTTHGSTVSRDRVLLAFAILRSMSIDVGKIISSEIVD
             F E++     +QL   ++ + I GAQW +S    +T     L+  A  W  F+  RLL +THG T+SR+R +L +A+L    I+VG++I  +I  
Subjt:  -----FNEMVVAPSSDQLSAAVREVGIEGAQWRVSQTQKHTFQAAYLKSEANTWMSFIRLRLLQTTHGSTVSRDRVLLAFAILRSMSIDVGKIISSEIVD

Query:  CWKKKVGKLFFPKTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLARL
        C +K  G L+FP  I+ LC ++ V     +  + + G +D   + R+
Subjt:  CWKKKVGKLFFPKTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLARL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAGACTAGAGCTAGGAAAGAGAGGGAGAGTGAAGAGGAGGAGAATCTTGAGACAGAATCGATAGTTTCTGATACAGTTCAAGAAAAGATTGCTGAGAAAAATCA
AGAAACAGAGGTTGAAGAGCAGGCTGAAGGTGAGCCTAGCAAGGAGAAAACACTGGAGCTGGCGCAGGAGGCTCATGTTGAAATCATTATGCCTGAACCGCCCAAGCGCT
GCCGCATCGAGAGGAAGGCGGGTCGCGTGAGGGTGATTCGAAACACGCCATCACCTCCGACGTCGGACTCTGAGGAAGAAAAAAGGGAAGCTGAGAATAAGGAAAAAAAA
GAAGAGGCAAGAAAGGCAGAAGAAGAGCGTTTGCGCGAACAGAGAGAAGGCAAGGGCAAAGGAATTGCCGAAGCATCGGGAGAAATTGAGGAGCCGAGGGCACCATTCAT
TCGCTTCGTCAACGATCTTGCTCGAGCAAAATACCAGGAGGTGCTGAAACGGGACTTCTTGTTCGAACGAGGATTTGGCAGTGATTTGCCCAGGTTCTTGGAGTCTGGAA
TAGTGAACCTCGGATGGAGGAAATTTTGTGCGAAACCAGAACCTGTCAATTCCAACATTGTTCGAGAGTTTTATGCCAATCTTGACGTTAAGAATGATTTTGAGGATTTT
CCGCATGCCGTTTTTAATGAGATGGTGGTTGCACCATCTAGTGATCAACTGAGTGCGGCTGTCCGGGAGGTAGGCATTGAGGGGGCTCAATGGAGGGTGTCGCAGACGCA
GAAGCATACGTTTCAAGCTGCTTATTTGAAGAGTGAAGCCAACACTTGGATGAGTTTCATCAGGCTACGTTTGCTGCAGACAACACACGGCTCCACAGTATCTCGGGACA
GGGTATTGCTTGCCTTTGCCATTCTTCGCTCGATGAGTATTGATGTAGGAAAAATTATTTCTTCTGAGATTGTTGATTGTTGGAAAAAGAAGGTGGGGAAGCTGTTCTTT
CCAAAAACTATCACAATGTTATGCAGTAGGGCAGGAGTGCCCACGGTTCCAGAAGATATGATCATGACTGATAAGGGAATCATTGACACACCTAATCTGGCGCGGCTTCA
GCGTATGCAAGAGGTTCGCCAGGGTGGGCTTGTGTATGGCGTTAATCAGATCCTAGAGCAACTGTCAGTGTTGGCCAGTAGGTTAGAATTTGCTGAAAGGCAAGCTCAGA
CCTACTGGACTTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAGACTAGAGCTAGGAAAGAGAGGGAGAGTGAAGAGGAGGAGAATCTTGAGACAGAATCGATAGTTTCTGATACAGTTCAAGAAAAGATTGCTGAGAAAAATCA
AGAAACAGAGGTTGAAGAGCAGGCTGAAGGTGAGCCTAGCAAGGAGAAAACACTGGAGCTGGCGCAGGAGGCTCATGTTGAAATCATTATGCCTGAACCGCCCAAGCGCT
GCCGCATCGAGAGGAAGGCGGGTCGCGTGAGGGTGATTCGAAACACGCCATCACCTCCGACGTCGGACTCTGAGGAAGAAAAAAGGGAAGCTGAGAATAAGGAAAAAAAA
GAAGAGGCAAGAAAGGCAGAAGAAGAGCGTTTGCGCGAACAGAGAGAAGGCAAGGGCAAAGGAATTGCCGAAGCATCGGGAGAAATTGAGGAGCCGAGGGCACCATTCAT
TCGCTTCGTCAACGATCTTGCTCGAGCAAAATACCAGGAGGTGCTGAAACGGGACTTCTTGTTCGAACGAGGATTTGGCAGTGATTTGCCCAGGTTCTTGGAGTCTGGAA
TAGTGAACCTCGGATGGAGGAAATTTTGTGCGAAACCAGAACCTGTCAATTCCAACATTGTTCGAGAGTTTTATGCCAATCTTGACGTTAAGAATGATTTTGAGGATTTT
CCGCATGCCGTTTTTAATGAGATGGTGGTTGCACCATCTAGTGATCAACTGAGTGCGGCTGTCCGGGAGGTAGGCATTGAGGGGGCTCAATGGAGGGTGTCGCAGACGCA
GAAGCATACGTTTCAAGCTGCTTATTTGAAGAGTGAAGCCAACACTTGGATGAGTTTCATCAGGCTACGTTTGCTGCAGACAACACACGGCTCCACAGTATCTCGGGACA
GGGTATTGCTTGCCTTTGCCATTCTTCGCTCGATGAGTATTGATGTAGGAAAAATTATTTCTTCTGAGATTGTTGATTGTTGGAAAAAGAAGGTGGGGAAGCTGTTCTTT
CCAAAAACTATCACAATGTTATGCAGTAGGGCAGGAGTGCCCACGGTTCCAGAAGATATGATCATGACTGATAAGGGAATCATTGACACACCTAATCTGGCGCGGCTTCA
GCGTATGCAAGAGGTTCGCCAGGGTGGGCTTGTGTATGGCGTTAATCAGATCCTAGAGCAACTGTCAGTGTTGGCCAGTAGGTTAGAATTTGCTGAAAGGCAAGCTCAGA
CCTACTGGACTTATTGA
Protein sequenceShow/hide protein sequence
MAKTRARKERESEEEENLETESIVSDTVQEKIAEKNQETEVEEQAEGEPSKEKTLELAQEAHVEIIMPEPPKRCRIERKAGRVRVIRNTPSPPTSDSEEEKREAENKEKK
EEARKAEEERLREQREGKGKGIAEASGEIEEPRAPFIRFVNDLARAKYQEVLKRDFLFERGFGSDLPRFLESGIVNLGWRKFCAKPEPVNSNIVREFYANLDVKNDFEDF
PHAVFNEMVVAPSSDQLSAAVREVGIEGAQWRVSQTQKHTFQAAYLKSEANTWMSFIRLRLLQTTHGSTVSRDRVLLAFAILRSMSIDVGKIISSEIVDCWKKKVGKLFF
PKTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLARLQRMQEVRQGGLVYGVNQILEQLSVLASRLEFAERQAQTYWTY