; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028401 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028401
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr8:20852876..20853424
RNA-Seq ExpressionLag0028401
SyntenyLag0028401
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4376994.1 hypothetical protein F8388_022710 [Cannabis sativa]4.0e-1331.25Show/hide
Query:  WRKVWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHLMWERKLTKGAWVKFIPNSLNLFQFCRDLWDSK--DYWNWLVDNLS
        W+ +WS ++PPR K+ +W++ +N + ++TN+L +G+ +NP C  C N  E   H++W    TK  W K IP     ++ C  + D    D    L + L 
Subjt:  WRKVWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHLMWERKLTKGAWVKFIPNSLNLFQFCRDLWDSK--DYWNWLVDNLS

Query:  QEECAKAILIMWIIWGFRNKVMTKNSTPSTDPLLKKLEIDIMDW
        + E  +AI +MW I   RN+   K  T +         I ++DW
Subjt:  QEECAKAILIMWIIWGFRNKVMTKNSTPSTDPLLKKLEIDIMDW

KAF4379638.1 hypothetical protein F8388_023655 [Cannabis sativa]1.8e-1324.03Show/hide
Query:  DPSKATSLWRKVWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHLMWERKLTKGAW--VKFIPNSLNLFQFCRDLWDSKDYW
        + S  +  W K+W  ++PP+ K   W+V  N + ++  + TK + +N  C +C   PE + H++      +  W   +      +   FC        +W
Subjt:  DPSKATSLWRKVWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHLMWERKLTKGAW--VKFIPNSLNLFQFCRDLWDSKDYW

Query:  NWLVDNLSQEECAKAILIMWIIWGFRNKVMTKNSTPSTDPLLKKLEIDIMDWEE
           +   ++ EC +A +I+W+IW  RN+V+     P+++ +L   +++ +DW E
Subjt:  NWLVDNLSQEECAKAILIMWIIWGFRNKVMTKNSTPSTDPLLKKLEIDIMDWEE

KAF4398351.1 hypothetical protein G4B88_025330 [Cannabis sativa]4.0e-1331.25Show/hide
Query:  WRKVWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHLMWERKLTKGAWVKFIPNSLNLFQFCRDLWDSK--DYWNWLVDNLS
        W+ +WS ++PPR K+ +W++ +N + ++TN+L +G+ +NP C  C N  E   H++W    TK  W K IP     ++ C  + D    D    L + L 
Subjt:  WRKVWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHLMWERKLTKGAWVKFIPNSLNLFQFCRDLWDSK--DYWNWLVDNLS

Query:  QEECAKAILIMWIIWGFRNKVMTKNSTPSTDPLLKKLEIDIMDW
        + E  +AI +MW I   RN+   K  T +         I ++DW
Subjt:  QEECAKAILIMWIIWGFRNKVMTKNSTPSTDPLLKKLEIDIMDW

XP_015382982.1 uncharacterized protein LOC107175766 [Citrus sinensis]5.2e-1327.33Show/hide
Query:  PSKATSLWRKVWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHLMWERKLTKGAWVKFIPNSLNLFQFCRDLWDSKDYWNWL
        P   T +WRK+W+  VP + K   W+   N++ +  N+++K +++ P C +C    E   H + E  + K  W   I +S+     C    +  D+   +
Subjt:  PSKATSLWRKVWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHLMWERKLTKGAWVKFIPNSLNLFQFCRDLWDSKDYWNWL

Query:  VDNLSQEECAKAILIMWIIWGFRNKVMTKNSTPSTDPLLKKLEIDIMDWE
        V   S+EEC  A++I W +W  RN  +  N T S + +L      +  W+
Subjt:  VDNLSQEECAKAILIMWIIWGFRNKVMTKNSTPSTDPLLKKLEIDIMDWE

XP_030504824.1 uncharacterized protein LOC115719776 [Cannabis sativa]6.8e-1323.68Show/hide
Query:  DPSKATSLWRKVWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHLMWERKLTKGAW--VKFIPNSLNLFQFCRDLWDSKDYW
        + S  +  W K+W  ++PP+ K   W+V  N + ++  + TK + +N  C +C   PE + H++      +  W   +      +   FC        +W
Subjt:  DPSKATSLWRKVWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHLMWERKLTKGAW--VKFIPNSLNLFQFCRDLWDSKDYW

Query:  NWLVDNLSQEECAKAILIMWIIWGFRNKVMTKNSTPSTDPLLKKLEIDIMDW
           +   ++ EC +A +I+W+IW  RN+V+     P+++ +L   +++ +DW
Subjt:  NWLVDNLSQEECAKAILIMWIIWGFRNKVMTKNSTPSTDPLLKKLEIDIMDW

TrEMBL top hitse value%identityAlignment
A0A2N9IMU5 Uncharacterized protein6.0e-1525.44Show/hide
Query:  GASQSDPSKATSLWRKVWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHLMWERKLTKGAWVK---FIPNSLNLFQFCRDLW
        G+S +  S    LW  +WSA+VPP+ ++  W+   +I+ ++T +  KG+  +  C+ C   PE  +H++W+ +  +  W+     IP+S      C    
Subjt:  GASQSDPSKATSLWRKVWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHLMWERKLTKGAWVK---FIPNSLNLFQFCRDLW

Query:  DSKDYWNWLVDNLSQEECAKAILIMWIIWGFRNKVMTKNSTPSTDPLLKKLEIDIMDWEENNLNLASLK
        + +D+    +DNLS+ +      I W IW  RN++  +N   + + + ++  +  +D++E  L L  ++
Subjt:  DSKDYWNWLVDNLSQEECAKAILIMWIIWGFRNKVMTKNSTPSTDPLLKKLEIDIMDWEENNLNLASLK

A0A7J6G1X2 Uncharacterized protein1.9e-1331.25Show/hide
Query:  WRKVWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHLMWERKLTKGAWVKFIPNSLNLFQFCRDLWDSK--DYWNWLVDNLS
        W+ +WS ++PPR K+ +W++ +N + ++TN+L +G+ +NP C  C N  E   H++W    TK  W K IP     ++ C  + D    D    L + L 
Subjt:  WRKVWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHLMWERKLTKGAWVKFIPNSLNLFQFCRDLWDSK--DYWNWLVDNLS

Query:  QEECAKAILIMWIIWGFRNKVMTKNSTPSTDPLLKKLEIDIMDW
        + E  +AI +MW I   RN+   K  T +         I ++DW
Subjt:  QEECAKAILIMWIIWGFRNKVMTKNSTPSTDPLLKKLEIDIMDW

A0A7J6HTY0 Uncharacterized protein1.9e-1331.25Show/hide
Query:  WRKVWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHLMWERKLTKGAWVKFIPNSLNLFQFCRDLWDSK--DYWNWLVDNLS
        W+ +WS ++PPR K+ +W++ +N + ++TN+L +G+ +NP C  C N  E   H++W    TK  W K IP     ++ C  + D    D    L + L 
Subjt:  WRKVWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHLMWERKLTKGAWVKFIPNSLNLFQFCRDLWDSK--DYWNWLVDNLS

Query:  QEECAKAILIMWIIWGFRNKVMTKNSTPSTDPLLKKLEIDIMDW
        + E  +AI +MW I   RN+   K  T +         I ++DW
Subjt:  QEECAKAILIMWIIWGFRNKVMTKNSTPSTDPLLKKLEIDIMDW

A0A803P1T5 Uncharacterized protein1.5e-1326.04Show/hide
Query:  TSLWRKVWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHLMWERKLTKGAWVKFIPNSLNLFQFCRDLWDSKDYWNWLVDNL
        T +WRK+WS +VPP+     W+   N + ++  + TK + +   C LC   PE T HL+      +  W +    S+         W       W     
Subjt:  TSLWRKVWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHLMWERKLTKGAWVKFIPNSLNLFQFCRDLWDSKDYWNWLVDNL

Query:  SQEECAKAILIMWIIWGFRNKVMTKNSTPSTDPLLKKLEIDIMDW------EENNLNLASLKRSGSCSS
        S+ EC +A + +W +W  RN+V+  + +PS++ ++   +++ +DW      E+  L  ++L  SG   S
Subjt:  SQEECAKAILIMWIIWGFRNKVMTKNSTPSTDPLLKKLEIDIMDW------EENNLNLASLKRSGSCSS

A0A803QD63 Uncharacterized protein1.9e-1331.25Show/hide
Query:  WRKVWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHLMWERKLTKGAWVKFIPNSLNLFQFCRDLWDSK--DYWNWLVDNLS
        W+ +WS ++PPR K+ +W++ +N + ++TN+L +G+ +NP C  C N  E   H++W    TK  W K IP     ++ C  + D    D    L + L 
Subjt:  WRKVWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHLMWERKLTKGAWVKFIPNSLNLFQFCRDLWDSK--DYWNWLVDNLS

Query:  QEECAKAILIMWIIWGFRNKVMTKNSTPSTDPLLKKLEIDIMDW
        + E  +AI +MW I   RN+   K  T +         I ++DW
Subjt:  QEECAKAILIMWIIWGFRNKVMTKNSTPSTDPLLKKLEIDIMDW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein7.0e-0823.31Show/hide
Query:  PSKATSLWRKVWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHLMWERKLTKGAWVKFIPNSLNLFQFCRDLW----DSKDY
        P  +T + + +W   V P+ K   W+ +   + + T + ++ ID +P C  C  + E  +H+M+    T+  W      S N+     + W      +D 
Subjt:  PSKATSLWRKVWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHLMWERKLTKGAWVKFIPNSLNLFQFCRDLW----DSKDY

Query:  WNWLVDNLSQEECAKAI------LIMWIIWGFRNKVMTKNSTPSTDPLLKKLEIDIMDWEENN
         N L+  LS+ +   ++       IMW +W  RN  + +    S D   +K   D  +W   N
Subjt:  WNWLVDNLSQEECAKAI------LIMWIIWGFRNKVMTKNSTPSTDPLLKKLEIDIMDWEENN

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.5e-0530.77Show/hide
Query:  VWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHL
        +WS ++ P+ K+  WK +NN +     +L++ I + P+C  CR+    T+ L
Subjt:  VWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCTTTTCTCCTAAAAGCAAGGGAGCTTCTCAATCCGATCCAAGCAAAGCTACCTCCCTTTGGAGGAAGGTGTGGTCAGCCAGAGTTCCCCCGAGGGCAAAAGT
CACTGCTTGGAAGGTCATCAACAATATCATTCATAGCCAGACCAATATTCTAACGAAAGGGATTGATCTTAACCCCTACTGCGTTTTGTGTAGGAATAAGCCAGAATTTA
CCAATCACCTTATGTGGGAACGTAAGCTCACCAAAGGGGCTTGGGTAAAATTTATTCCAAACTCACTAAATTTATTTCAATTTTGCAGGGATCTATGGGACTCTAAAGAC
TACTGGAATTGGTTGGTTGATAATCTCTCACAAGAAGAGTGTGCTAAAGCTATCCTAATTATGTGGATAATATGGGGTTTCAGAAACAAAGTGATGACAAAGAACTCAAC
CCCTTCAACAGATCCACTCCTCAAGAAATTAGAGATTGACATCATGGATTGGGAAGAGAATAACCTCAATTTGGCAAGCCTGAAGAGATCAGGGAGTTGTTCGAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTACCTTTTCTCCTAAAAGCAAGGGAGCTTCTCAATCCGATCCAAGCAAAGCTACCTCCCTTTGGAGGAAGGTGTGGTCAGCCAGAGTTCCCCCGAGGGCAAAAGT
CACTGCTTGGAAGGTCATCAACAATATCATTCATAGCCAGACCAATATTCTAACGAAAGGGATTGATCTTAACCCCTACTGCGTTTTGTGTAGGAATAAGCCAGAATTTA
CCAATCACCTTATGTGGGAACGTAAGCTCACCAAAGGGGCTTGGGTAAAATTTATTCCAAACTCACTAAATTTATTTCAATTTTGCAGGGATCTATGGGACTCTAAAGAC
TACTGGAATTGGTTGGTTGATAATCTCTCACAAGAAGAGTGTGCTAAAGCTATCCTAATTATGTGGATAATATGGGGTTTCAGAAACAAAGTGATGACAAAGAACTCAAC
CCCTTCAACAGATCCACTCCTCAAGAAATTAGAGATTGACATCATGGATTGGGAAGAGAATAACCTCAATTTGGCAAGCCTGAAGAGATCAGGGAGTTGTTCGAGTTAG
Protein sequenceShow/hide protein sequence
MATFSPKSKGASQSDPSKATSLWRKVWSARVPPRAKVTAWKVINNIIHSQTNILTKGIDLNPYCVLCRNKPEFTNHLMWERKLTKGAWVKFIPNSLNLFQFCRDLWDSKD
YWNWLVDNLSQEECAKAILIMWIIWGFRNKVMTKNSTPSTDPLLKKLEIDIMDWEENNLNLASLKRSGSCSS