; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028404 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028404
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr8:20869776..20870446
RNA-Seq ExpressionLag0028404
SyntenyLag0028404
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAE1322405.1 unnamed protein product [Sepia pharaonis]6.7e-0435.19Show/hide
Query:  ITC---PSPLTSGSDQPLIQAEFRMITRPSHLASGSDQPLIQAEFKMITRPSHLALGSDQPLIQTEFRMITCLSHLASGSDQPLIQAKFS-NAVNRRQLE
        +TC   PS L S SD P I         P+HL S SD P I         PSHL   S  P I          SHL S SD P I  + + + +    L 
Subjt:  ITC---PSPLTSGSDQPLIQAEFRMITRPSHLASGSDQPLIQAEFKMITRPSHLALGSDQPLIQTEFRMITCLSHLASGSDQPLIQAKFS-NAVNRRQLE

Query:  DEVTPSIV
          V+P+IV
Subjt:  DEVTPSIV
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCACTTGTCCTTCACCTCTTACCTCAGGCAGTGATCAACCCCTGATTCAGGCAGAATTCAGGATGATCACTCGCCCTTCACATCTTGCCTCAGGCAGTGATCAACC
TTTGATTCAGGCAGAATTCAAGATGATCACTCGCCCTTCACATCTTGCCTTAGGCAGTGATCAACCCCTGATTCAGACGGAATTCAGGATGATCACTTGTCTTTCACATC
TTGCCTCAGGCAGTGATCAACCCCTGATTCAAGCGAAATTCAGCAACGCCGTCAATCGCCGTCAACTTGAAGATGAAGTGACACCGTCAATCGTCGACTTTGGAGATGAA
ACGACGTCGTCAATCGCCGTCAACTATGAAAATGAAGCGATGTTATCAATCGCCACCAACTTTGAAGATGAAGCGACGCCGTCAATCACCACCAACTTTGAAGAGGAAGC
GACGCCGTCAATCACACCCAACTTTGAAGATGAAGCAAAGTTAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCACTTGTCCTTCACCTCTTACCTCAGGCAGTGATCAACCCCTGATTCAGGCAGAATTCAGGATGATCACTCGCCCTTCACATCTTGCCTCAGGCAGTGATCAACC
TTTGATTCAGGCAGAATTCAAGATGATCACTCGCCCTTCACATCTTGCCTTAGGCAGTGATCAACCCCTGATTCAGACGGAATTCAGGATGATCACTTGTCTTTCACATC
TTGCCTCAGGCAGTGATCAACCCCTGATTCAAGCGAAATTCAGCAACGCCGTCAATCGCCGTCAACTTGAAGATGAAGTGACACCGTCAATCGTCGACTTTGGAGATGAA
ACGACGTCGTCAATCGCCGTCAACTATGAAAATGAAGCGATGTTATCAATCGCCACCAACTTTGAAGATGAAGCGACGCCGTCAATCACCACCAACTTTGAAGAGGAAGC
GACGCCGTCAATCACACCCAACTTTGAAGATGAAGCAAAGTTAGAGTGA
Protein sequenceShow/hide protein sequence
MITCPSPLTSGSDQPLIQAEFRMITRPSHLASGSDQPLIQAEFKMITRPSHLALGSDQPLIQTEFRMITCLSHLASGSDQPLIQAKFSNAVNRRQLEDEVTPSIVDFGDE
TTSSIAVNYENEAMLSIATNFEDEATPSITTNFEEEATPSITPNFEDEAKLE