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Lag0028409 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028409
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC107943328
Genome locationchr8:21018012..21019326
RNA-Seq ExpressionLag0028409
SyntenyLag0028409
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_028098230.1 uncharacterized protein LOC114297954 [Camellia sinensis]5.5e-2135.95Show/hide
Query:  KEIELHGAGAYFHVSEFFSSCSERKPPEMCGDQFKLRVFPYSLQGEARKWIFSLPSRLVSSWSEMRSIFLKKYHPTALLIEATRRIVNVTQAPEEFFHEF
        +E  + G   + H+ +    C+  KP  +  +Q KLR FP+SL+  A+ W++ LPSR +++W+EM+ +FL+KY P +      + I  V Q   E  HE+
Subjt:  KEIELHGAGAYFHVSEFFSSCSERKPPEMCGDQFKLRVFPYSLQGEARKWIFSLPSRLVSSWSEMRSIFLKKYHPTALLIEATRRIVNVTQAPEEFFHEF

Query:  MNRFNLYCME-HHTPLSEESLIESFYEGLTPEDRRMFDSVMTAHAIKKGLFIV
          RF   C    H  +SE+ LI+ FYEGL P DR M D+      + K L +V
Subjt:  MNRFNLYCME-HHTPLSEESLIESFYEGLTPEDRRMFDSVMTAHAIKKGLFIV

XP_038972621.1 uncharacterized protein LOC120104835 [Phoenix dactylifera]9.4e-2137.5Show/hide
Query:  LHGAGAYFHVSEFFSSCSERKPPEMCGDQFKLRVFPYSLQGEARKWIFSLPSRLVSSWSEMRSIFLKKYHPTALLIEATRRIVNVTQAPEEFFHEFMNRF
        L G   + H+ EF   C+  KP E+  +Q KLR FP+SL+  A+ W++ LPS  ++ W+EM+ +FL+KY P +      + I  V Q   E  HE+  RF
Subjt:  LHGAGAYFHVSEFFSSCSERKPPEMCGDQFKLRVFPYSLQGEARKWIFSLPSRLVSSWSEMRSIFLKKYHPTALLIEATRRIVNVTQAPEEFFHEFMNRF

Query:  NLYCME-HHTPLSEESLIESFYEGLTPEDRRMFDSVMTAHAIKK
           C    H  +SE+ LI+ FYEGL P +R M D+      + K
Subjt:  NLYCME-HHTPLSEESLIESFYEGLTPEDRRMFDSVMTAHAIKK

XP_038973755.1 uncharacterized protein LOC120105408 [Phoenix dactylifera]2.7e-2036.81Show/hide
Query:  LHGAGAYFHVSEFFSSCSERKPPEMCGDQFKLRVFPYSLQGEARKWIFSLPSRLVSSWSEMRSIFLKKYHPTALLIEATRRIVNVTQAPEEFFHEFMNRF
        L G   + H+ EF   C+  KP  +  +Q KLR FP+SL+  A+ W++ LPS  ++ W+EM+ +FL+KY P +      + I  V Q   E  HE+  RF
Subjt:  LHGAGAYFHVSEFFSSCSERKPPEMCGDQFKLRVFPYSLQGEARKWIFSLPSRLVSSWSEMRSIFLKKYHPTALLIEATRRIVNVTQAPEEFFHEFMNRF

Query:  NLYCME-HHTPLSEESLIESFYEGLTPEDRRMFDSVMTAHAIKK
           C    H  +SE+ LI+ FYEGL P +R M D+      + K
Subjt:  NLYCME-HHTPLSEESLIESFYEGLTPEDRRMFDSVMTAHAIKK

XP_038975911.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120106880 [Phoenix dactylifera]4.7e-2036.81Show/hide
Query:  LHGAGAYFHVSEFFSSCSERKPPEMCGDQFKLRVFPYSLQGEARKWIFSLPSRLVSSWSEMRSIFLKKYHPTALLIEATRRIVNVTQAPEEFFHEFMNRF
        L G   + H+ EF   C+  KP  +  +Q KLR FP+SL+  A+ W++ LPS  ++ W+EM+ +FL+KY P +      + I  V Q   E  HE+  RF
Subjt:  LHGAGAYFHVSEFFSSCSERKPPEMCGDQFKLRVFPYSLQGEARKWIFSLPSRLVSSWSEMRSIFLKKYHPTALLIEATRRIVNVTQAPEEFFHEFMNRF

Query:  NLYCME-HHTPLSEESLIESFYEGLTPEDRRMFDSVMTAHAIKK
           C    H  +SE+ LI+ FYEGL P +R M D+      + K
Subjt:  NLYCME-HHTPLSEESLIESFYEGLTPEDRRMFDSVMTAHAIKK

XP_038978941.1 uncharacterized protein LOC120109260, partial [Phoenix dactylifera]3.6e-2037.5Show/hide
Query:  LHGAGAYFHVSEFFSSCSERKPPEMCGDQFKLRVFPYSLQGEARKWIFSLPSRLVSSWSEMRSIFLKKYHPTALLIEATRRIVNVTQAPEEFFHEFMNRF
        L G   + H+ EF   C+  KP  +  +Q KLR FP+SL+  A+ W++ LPS  ++ W+EM+ +FL+KY P +      + I  V Q   E  HE+  RF
Subjt:  LHGAGAYFHVSEFFSSCSERKPPEMCGDQFKLRVFPYSLQGEARKWIFSLPSRLVSSWSEMRSIFLKKYHPTALLIEATRRIVNVTQAPEEFFHEFMNRF

Query:  -NLYCMEHHTPLSEESLIESFYEGLTPEDRRMFDSVMTAHAIKK
          LY    H  +SE+ LI+ FYEGL P +R M D+      + K
Subjt:  -NLYCMEHHTPLSEESLIESFYEGLTPEDRRMFDSVMTAHAIKK

TrEMBL top hitse value%identityAlignment
A0A1U7ZI23 uncharacterized protein LOC1045908271.5e-1936.11Show/hide
Query:  LHGAGAYFHVSEFFSSCSERKPPEMCGDQFKLRVFPYSLQGEARKWIFSLPSRLVSSWSEMRSIFLKKYHPTALLIEATRRIVNVTQAPEEFFHEFMNRF
        L G   + H+ E    C+  KP  +  +Q KLR FP+SL+  A+ W++ LP   V++W+EM+ +FL+KY P + +    + I  + Q   EF HE+  RF
Subjt:  LHGAGAYFHVSEFFSSCSERKPPEMCGDQFKLRVFPYSLQGEARKWIFSLPSRLVSSWSEMRSIFLKKYHPTALLIEATRRIVNVTQAPEEFFHEFMNRF

Query:  NLYCME-HHTPLSEESLIESFYEGLTPEDRRMFDSVMTAHAIKK
           C    H  +SE+ LI+ FYEG  P DR M D+      + K
Subjt:  NLYCME-HHTPLSEESLIESFYEGLTPEDRRMFDSVMTAHAIKK

A0A1U8N3Z0 LOW QUALITY PROTEIN: uncharacterized protein LOC1079433286.6e-2035.42Show/hide
Query:  LHGAGAYFHVSEFFSSCSERKPPEMCGDQFKLRVFPYSLQGEARKWIFSLPSRLVSSWSEMRSIFLKKYHPTALLIEATRRIVNVTQAPEEFFHEFMNRF
        L G   Y H++EF  +CS  +P  +  +Q KLR FP+SLQG A+ W++ +P    ++W+ +   FL+KY PT+ +    + I  + Q   E  +E+  RF
Subjt:  LHGAGAYFHVSEFFSSCSERKPPEMCGDQFKLRVFPYSLQGEARKWIFSLPSRLVSSWSEMRSIFLKKYHPTALLIEATRRIVNVTQAPEEFFHEFMNRF

Query:  NLYCME-HHTPLSEESLIESFYEGLTPEDRRMFDSVMTAHAIKK
           C       +SE+ L++ FYEGLTP+DR M D+      + K
Subjt:  NLYCME-HHTPLSEESLIESFYEGLTPEDRRMFDSVMTAHAIKK

A0A6P4PQT0 uncharacterized protein LOC1084754421.1e-1937.98Show/hide
Query:  HVSEFFSSCSERKPPEMCGDQFKLRVFPYSLQGEARKWIFSLPSRLVSSWSEMRSIFLKKYHPTALLIEATRRIVNVTQAPEEFFHEFMNRFN---LYCM
        H++EF   CS  KP  + GDQ KLR FP+SL G A++W+F LP   +++W+E+  +FL +Y   A   E  R I+ + Q  +E  +++  RF      C+
Subjt:  HVSEFFSSCSERKPPEMCGDQFKLRVFPYSLQGEARKWIFSLPSRLVSSWSEMRSIFLKKYHPTALLIEATRRIVNVTQAPEEFFHEFMNRFN---LYCM

Query:  EHHTPLSEESLIESFYEGLTPEDRRMFDS
        +H   LSE++L++  YEG+ P D++M D+
Subjt:  EHHTPLSEESLIESFYEGLTPEDRRMFDS

A0A6P6T204 uncharacterized protein LOC1136968556.6e-2034.93Show/hide
Query:  LHGAGAYFHVSEFFSSCSERKPPEMCGDQFKLRVFPYSLQGEARKWIFSLPSRLVSSWSEMRSIFLKKYHPTALLIEATRRIVNVTQAPEEFFHEFMNRF
        L G   + HV EF   CS  KPP +  +Q +LR+FP+SL+  A+ W++ LP+  ++ W++++  FL+K+ P +      + I N+ Q P E  +E+  RF
Subjt:  LHGAGAYFHVSEFFSSCSERKPPEMCGDQFKLRVFPYSLQGEARKWIFSLPSRLVSSWSEMRSIFLKKYHPTALLIEATRRIVNVTQAPEEFFHEFMNRF

Query:  N---LYCMEHHTPLSEESLIESFYEGLTPEDRRMFDSVMTAHAIKK
        N     C++H   +SE+ LI+ FYEGL   DR + D+    H + +
Subjt:  N---LYCMEHHTPLSEESLIESFYEGLTPEDRRMFDSVMTAHAIKK

A0A6P6U8I2 uncharacterized protein LOC1137082571.1e-1936.3Show/hide
Query:  LHGAGAYFHVSEFFSSCSERKPPEMCGDQFKLRVFPYSLQGEARKWIFSLPSRLVSSWSEMRSIFLKKYHPTALLIEATRRIVNVTQAPEEFFHEFMNRF
        L G   + HV EF   CS  KPP +  +Q +LR FP+SL+  A+ W++ LP+  +++W++++  FLKK+ P +  +   + I  + Q P E  +E+  RF
Subjt:  LHGAGAYFHVSEFFSSCSERKPPEMCGDQFKLRVFPYSLQGEARKWIFSLPSRLVSSWSEMRSIFLKKYHPTALLIEATRRIVNVTQAPEEFFHEFMNRF

Query:  NLYCMEH-HTPLSEESLIESFYEGLTPEDRRMFDS
        N  C  +    +SE+ LI+ FYEGL   DR + D+
Subjt:  NLYCMEH-HTPLSEESLIESFYEGLTPEDRRMFDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGTGTTCTTCGTTGTTGCAGAGCAATCAAGAATCATTCTTGAAGTATTCAGAGTCGTCAACGACGATCTGGTGACAAATCTTTACAAGAGAAAACACCTCCCTAC
CAAGAAGCAAGGAAAAGAAATTGAGCTTCATGGAGCAGGAGCCTACTTTCATGTATCTGAGTTCTTCTCGAGTTGTTCCGAAAGGAAACCCCCAGAGATGTGTGGAGATC
AATTCAAATTGAGGGTGTTCCCATATTCACTGCAAGGAGAAGCTAGGAAGTGGATTTTCTCATTGCCTTCAAGATTGGTGTCTTCTTGGAGCGAGATGAGAAGTATTTTC
CTGAAGAAGTACCACCCTACTGCGCTGTTGATTGAAGCCACCAGAAGAATTGTCAATGTCACGCAAGCGCCTGAGGAGTTCTTCCATGAGTTCATGAACCGCTTCAATCT
ATACTGCATGGAACATCACACCCCACTTTCGGAGGAGTCTCTGATAGAAAGCTTCTACGAAGGGTTGACACCTGAAGATAGAAGAATGTTTGACTCAGTCATGACAGCCC
ATGCTATAAAAAAGGGACTTTTTATAGTGTTTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGTGTTCTTCGTTGTTGCAGAGCAATCAAGAATCATTCTTGAAGTATTCAGAGTCGTCAACGACGATCTGGTGACAAATCTTTACAAGAGAAAACACCTCCCTAC
CAAGAAGCAAGGAAAAGAAATTGAGCTTCATGGAGCAGGAGCCTACTTTCATGTATCTGAGTTCTTCTCGAGTTGTTCCGAAAGGAAACCCCCAGAGATGTGTGGAGATC
AATTCAAATTGAGGGTGTTCCCATATTCACTGCAAGGAGAAGCTAGGAAGTGGATTTTCTCATTGCCTTCAAGATTGGTGTCTTCTTGGAGCGAGATGAGAAGTATTTTC
CTGAAGAAGTACCACCCTACTGCGCTGTTGATTGAAGCCACCAGAAGAATTGTCAATGTCACGCAAGCGCCTGAGGAGTTCTTCCATGAGTTCATGAACCGCTTCAATCT
ATACTGCATGGAACATCACACCCCACTTTCGGAGGAGTCTCTGATAGAAAGCTTCTACGAAGGGTTGACACCTGAAGATAGAAGAATGTTTGACTCAGTCATGACAGCCC
ATGCTATAAAAAAGGGACTTTTTATAGTGTTTTTATAA
Protein sequenceShow/hide protein sequence
MVVFFVVAEQSRIILEVFRVVNDDLVTNLYKRKHLPTKKQGKEIELHGAGAYFHVSEFFSSCSERKPPEMCGDQFKLRVFPYSLQGEARKWIFSLPSRLVSSWSEMRSIF
LKKYHPTALLIEATRRIVNVTQAPEEFFHEFMNRFNLYCMEHHTPLSEESLIESFYEGLTPEDRRMFDSVMTAHAIKKGLFIVFL