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Lag0028417 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028417
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr8:21220805..21221682
RNA-Seq ExpressionLag0028417
SyntenyLag0028417
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]4.2e-0425.91Show/hide
Query:  VSFSSVDINRIYRVKVPLNQRGKNAIKNLTIKQLKEALKIVAKKGVQWKESQTKVKSLVPSDLMPEP---------------------------------
        VS+S   IN ++ +  P+++  +  I+N+T + L   L+ VA  G +W  S     + + S L P                                   
Subjt:  VSFSSVDINRIYRVKVPLNQRGKNAIKNLTIKQLKEALKIVAKKGVQWKESQTKVKSLVPSDLMPEP---------------------------------

Query:  GLELNIGSIIRDEILSCGRKKAGKLFFRSLINQLCQRVKITPAKDEEQHFYKPTIDLPLIGKLQLYNAQRKGKASTFQATPSPRLTPTSPSPSTLVSGPT
        G  +N+G +I  EI +C  +K G LFF SLI +LC+  +     +EE+      ID   + ++    AQ     ST Q        P+S  P+T      
Subjt:  GLELNIGSIIRDEILSCGRKKAGKLFFRSLINQLCQRVKITPAKDEEQHFYKPTIDLPLIGKLQLYNAQRKGKASTFQATPSPRLTPTSPSPSTLVSGPT

Query:  PSSKTLGFALRQLDQIEDLL
         S++T G  L+QL  +E  L
Subjt:  PSSKTLGFALRQLDQIEDLL

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)2.0e-0425.91Show/hide
Query:  VSFSSVDINRIYRVKVPLNQRGKNAIKNLTIKQLKEALKIVAKKGVQWKESQTKVKSLVPSDLMPEP---------------------------------
        VS+S   IN ++ +  P+++  +  I+N+T + L   L+ VA  G +W  S     + + S L P                                   
Subjt:  VSFSSVDINRIYRVKVPLNQRGKNAIKNLTIKQLKEALKIVAKKGVQWKESQTKVKSLVPSDLMPEP---------------------------------

Query:  GLELNIGSIIRDEILSCGRKKAGKLFFRSLINQLCQRVKITPAKDEEQHFYKPTIDLPLIGKLQLYNAQRKGKASTFQATPSPRLTPTSPSPSTLVSGPT
        G  +N+G +I  EI +C  +K G LFF SLI +LC+  +     +EE+      ID   + ++    AQ     ST Q        P+S  P+T      
Subjt:  GLELNIGSIIRDEILSCGRKKAGKLFFRSLINQLCQRVKITPAKDEEQHFYKPTIDLPLIGKLQLYNAQRKGKASTFQATPSPRLTPTSPSPSTLVSGPT

Query:  PSSKTLGFALRQLDQIEDLL
         S++T G  L+QL  +E  L
Subjt:  PSSKTLGFALRQLDQIEDLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGCTTCTCTTCTGTGGACATCAATAGGATTTATCGGGTCAAAGTACCTTTGAACCAGAGGGGAAAAAATGCAATAAAGAACCTCACGATCAAGCAGTTAAAAGA
AGCACTCAAGATAGTGGCCAAAAAAGGAGTGCAGTGGAAAGAGTCACAGACTAAAGTAAAGTCCTTGGTACCAAGTGACTTGATGCCTGAACCGGGGCTGGAGTTGAATA
TTGGAAGCATAATTCGTGACGAGATTCTCTCTTGTGGGAGAAAGAAGGCCGGAAAACTATTCTTTAGATCATTAATCAACCAACTATGTCAGAGAGTTAAGATCACTCCA
GCAAAGGATGAGGAGCAACACTTCTATAAGCCTACCATTGATCTACCATTGATAGGGAAGTTGCAGCTCTACAACGCACAGCGGAAAGGCAAGGCATCTACTTTCCAGGC
TACTCCTTCACCAAGGCTGACACCCACTTCACCATCGCCATCCACTCTTGTTTCAGGGCCTACTCCATCGTCTAAGACTCTTGGATTTGCTCTTAGACAATTGGACCAAA
TTGAAGACCTATTGAAGACATATTGGAGTTCGTTGTCTCAAGACCCCGAAGAATCTGATGAAGAAGAAGATGAAGATGATTCTCAGAGGAGTAATAGGGGAGTTTTCTGT
TCCCCTTATGATTTTACATGCTTAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGCTTCTCTTCTGTGGACATCAATAGGATTTATCGGGTCAAAGTACCTTTGAACCAGAGGGGAAAAAATGCAATAAAGAACCTCACGATCAAGCAGTTAAAAGA
AGCACTCAAGATAGTGGCCAAAAAAGGAGTGCAGTGGAAAGAGTCACAGACTAAAGTAAAGTCCTTGGTACCAAGTGACTTGATGCCTGAACCGGGGCTGGAGTTGAATA
TTGGAAGCATAATTCGTGACGAGATTCTCTCTTGTGGGAGAAAGAAGGCCGGAAAACTATTCTTTAGATCATTAATCAACCAACTATGTCAGAGAGTTAAGATCACTCCA
GCAAAGGATGAGGAGCAACACTTCTATAAGCCTACCATTGATCTACCATTGATAGGGAAGTTGCAGCTCTACAACGCACAGCGGAAAGGCAAGGCATCTACTTTCCAGGC
TACTCCTTCACCAAGGCTGACACCCACTTCACCATCGCCATCCACTCTTGTTTCAGGGCCTACTCCATCGTCTAAGACTCTTGGATTTGCTCTTAGACAATTGGACCAAA
TTGAAGACCTATTGAAGACATATTGGAGTTCGTTGTCTCAAGACCCCGAAGAATCTGATGAAGAAGAAGATGAAGATGATTCTCAGAGGAGTAATAGGGGAGTTTTCTGT
TCCCCTTATGATTTTACATGCTTAGCTTAG
Protein sequenceShow/hide protein sequence
MVSFSSVDINRIYRVKVPLNQRGKNAIKNLTIKQLKEALKIVAKKGVQWKESQTKVKSLVPSDLMPEPGLELNIGSIIRDEILSCGRKKAGKLFFRSLINQLCQRVKITP
AKDEEQHFYKPTIDLPLIGKLQLYNAQRKGKASTFQATPSPRLTPTSPSPSTLVSGPTPSSKTLGFALRQLDQIEDLLKTYWSSLSQDPEESDEEEDEDDSQRSNRGVFC
SPYDFTCLA