; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028433 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028433
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr8:21686743..21696536
RNA-Seq ExpressionLag0028433
SyntenyLag0028433
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM93404.1 hypothetical protein AMTR_s04947p00003620 [Amborella trichopoda]5.1e-4369.35Show/hide
Query:  QAENPILIANDRTRAIRAYAVPMFNELNPGIARPQIQAANFEMKPVMFQMLQTVGQFHGLSSEDPHLHLKSFLGVSDSFVIQGVPRDALRLTLFPYSLRD
        Q  NPI++A+DR RAIR YA PMFNELNPGI RP+IQA  FE+KPVMFQMLQTVGQF G+ +EDPHLHL+SFL VSDSF IQGV  + LRL LFP+SLRD
Subjt:  QAENPILIANDRTRAIRAYAVPMFNELNPGIARPQIQAANFEMKPVMFQMLQTVGQFHGLSSEDPHLHLKSFLGVSDSFVIQGVPRDALRLTLFPYSLRD

Query:  GAKSWLNSFAPGSIRTWDELAENF
         A+SWLN+  P S+  W++LAE F
Subjt:  GAKSWLNSFAPGSIRTWDELAENF

XP_022926214.1 uncharacterized protein LOC111433394 [Cucurbita moschata]9.7e-4265.69Show/hide
Query:  ENPLFEQNEQRNNQAENPILIANDRTRAIRAYAVPMFNELNPGIARPQIQAANFEMKPVMFQMLQTVGQFHGLSSEDPHLHLKSFLGVSDSFVIQGVPRD
        ENP    N++R     N I +A+DR RAIRAYA P   ELNP I RP++QA  FE+KPVMFQMLQT+GQFHGL SEDPHLHLKSFLGVSDSF  Q V +D
Subjt:  ENPLFEQNEQRNNQAENPILIANDRTRAIRAYAVPMFNELNPGIARPQIQAANFEMKPVMFQMLQTVGQFHGLSSEDPHLHLKSFLGVSDSFVIQGVPRD

Query:  ALRLTLFPYSLRDGAKSWLNSFAPGSIRTWDELAENF
         +RL+LFPYSLRDGAKSWLN+ A G+I +W+ L E F
Subjt:  ALRLTLFPYSLRDGAKSWLNSFAPGSIRTWDELAENF

XP_022929949.1 uncharacterized protein LOC111436411 [Cucurbita moschata]3.3e-4264.58Show/hide
Query:  ENPLFEQNEQRNNQAENPILIANDRTRAIRAYAVPMFNELNPGIARPQIQAANFEMKPVMFQMLQTVGQFHGLSSEDPHLHLKSFLGV-------SDSFV
        ENP    N++R     NPI +A+DR RAIRAYA P   ELNP I RP+IQ   FE+KPVMFQMLQT+GQFHGL  EDPHLHLKSFLGV       SDSF 
Subjt:  ENPLFEQNEQRNNQAENPILIANDRTRAIRAYAVPMFNELNPGIARPQIQAANFEMKPVMFQMLQTVGQFHGLSSEDPHLHLKSFLGV-------SDSFV

Query:  IQGVPRDALRLTLFPYSLRDGAKSWLNSFAPGSIRTWDELAENF
         QGV +D +RL+LFPY LRDGAKSWLN+ APG+I +W+ LAENF
Subjt:  IQGVPRDALRLTLFPYSLRDGAKSWLNSFAPGSIRTWDELAENF

XP_022960432.1 uncharacterized protein LOC111461168 [Cucurbita moschata]1.0e-4367.15Show/hide
Query:  ENPLFEQNEQRNNQAENPILIANDRTRAIRAYAVPMFNELNPGIARPQIQAANFEMKPVMFQMLQTVGQFHGLSSEDPHLHLKSFLGVSDSFVIQGVPRD
        ENP+   N++R     N I +A+DR RAIRAYA P  +ELNP I RP++QA  FE+KPVMFQMLQT+GQFHGL SEDPHLHLKSFLGVSDSF  QGV +D
Subjt:  ENPLFEQNEQRNNQAENPILIANDRTRAIRAYAVPMFNELNPGIARPQIQAANFEMKPVMFQMLQTVGQFHGLSSEDPHLHLKSFLGVSDSFVIQGVPRD

Query:  ALRLTLFPYSLRDGAKSWLNSFAPGSIRTWDELAENF
         +RL+LFPYSLRDGAKSWLN+ AP +I +W+ LAE F
Subjt:  ALRLTLFPYSLRDGAKSWLNSFAPGSIRTWDELAENF

XP_030497803.1 uncharacterized protein LOC115713460 [Cannabis sativa]3.3e-4268.25Show/hide
Query:  NNQAENPILIANDRTRAIRAYAVPMFNELNPGIARPQIQAANFEMKPVMFQMLQTVGQFHGLSSEDPHLHLKSFLGVSDSFVIQGVPRDALRLTLFPYSL
        +N+A NPI +A+DRTRAIR YA PMFNELNPGI RP+IQA +FE+KPVMFQMLQTVGQF G  +EDPHLH++SFL VSDSF +QGV  +ALRL LFP+SL
Subjt:  NNQAENPILIANDRTRAIRAYAVPMFNELNPGIARPQIQAANFEMKPVMFQMLQTVGQFHGLSSEDPHLHLKSFLGVSDSFVIQGVPRDALRLTLFPYSL

Query:  RDGAKSWLNSFAPGSIRTWDELAENF
        RD A++WLN+  P S+  W++LAE F
Subjt:  RDGAKSWLNSFAPGSIRTWDELAENF

TrEMBL top hitse value%identityAlignment
A0A6J1EEI2 uncharacterized protein LOC1114333944.7e-4265.69Show/hide
Query:  ENPLFEQNEQRNNQAENPILIANDRTRAIRAYAVPMFNELNPGIARPQIQAANFEMKPVMFQMLQTVGQFHGLSSEDPHLHLKSFLGVSDSFVIQGVPRD
        ENP    N++R     N I +A+DR RAIRAYA P   ELNP I RP++QA  FE+KPVMFQMLQT+GQFHGL SEDPHLHLKSFLGVSDSF  Q V +D
Subjt:  ENPLFEQNEQRNNQAENPILIANDRTRAIRAYAVPMFNELNPGIARPQIQAANFEMKPVMFQMLQTVGQFHGLSSEDPHLHLKSFLGVSDSFVIQGVPRD

Query:  ALRLTLFPYSLRDGAKSWLNSFAPGSIRTWDELAENF
         +RL+LFPYSLRDGAKSWLN+ A G+I +W+ L E F
Subjt:  ALRLTLFPYSLRDGAKSWLNSFAPGSIRTWDELAENF

A0A6J1EQ90 uncharacterized protein LOC1114364111.6e-4264.58Show/hide
Query:  ENPLFEQNEQRNNQAENPILIANDRTRAIRAYAVPMFNELNPGIARPQIQAANFEMKPVMFQMLQTVGQFHGLSSEDPHLHLKSFLGV-------SDSFV
        ENP    N++R     NPI +A+DR RAIRAYA P   ELNP I RP+IQ   FE+KPVMFQMLQT+GQFHGL  EDPHLHLKSFLGV       SDSF 
Subjt:  ENPLFEQNEQRNNQAENPILIANDRTRAIRAYAVPMFNELNPGIARPQIQAANFEMKPVMFQMLQTVGQFHGLSSEDPHLHLKSFLGV-------SDSFV

Query:  IQGVPRDALRLTLFPYSLRDGAKSWLNSFAPGSIRTWDELAENF
         QGV +D +RL+LFPY LRDGAKSWLN+ APG+I +W+ LAENF
Subjt:  IQGVPRDALRLTLFPYSLRDGAKSWLNSFAPGSIRTWDELAENF

A0A6J1G7Q6 uncharacterized protein LOC1114515988.8e-4170.25Show/hide
Query:  NPILIANDRTRAIRAYAVPMFNELNPGIARPQIQAANFEMKPVMFQMLQTVGQFHGLSSEDPHLHLKSFLGVSDSFVIQGVPRDALRLTLFPYSLRDGAK
        N I +A+DR RAIRAYA P   ELNP I RP++QA  FE+KPVMFQMLQT+GQFHGLSS+DPHLHLKSFLGVSDSF  QGV +D +RL+ F YSLRDGAK
Subjt:  NPILIANDRTRAIRAYAVPMFNELNPGIARPQIQAANFEMKPVMFQMLQTVGQFHGLSSEDPHLHLKSFLGVSDSFVIQGVPRDALRLTLFPYSLRDGAK

Query:  SWLNSFAPGSIRTWDELAENF
        SWLN  A G I +W+ LAE F
Subjt:  SWLNSFAPGSIRTWDELAENF

A0A6J1H7E4 uncharacterized protein LOC1114611685.0e-4467.15Show/hide
Query:  ENPLFEQNEQRNNQAENPILIANDRTRAIRAYAVPMFNELNPGIARPQIQAANFEMKPVMFQMLQTVGQFHGLSSEDPHLHLKSFLGVSDSFVIQGVPRD
        ENP+   N++R     N I +A+DR RAIRAYA P  +ELNP I RP++QA  FE+KPVMFQMLQT+GQFHGL SEDPHLHLKSFLGVSDSF  QGV +D
Subjt:  ENPLFEQNEQRNNQAENPILIANDRTRAIRAYAVPMFNELNPGIARPQIQAANFEMKPVMFQMLQTVGQFHGLSSEDPHLHLKSFLGVSDSFVIQGVPRD

Query:  ALRLTLFPYSLRDGAKSWLNSFAPGSIRTWDELAENF
         +RL+LFPYSLRDGAKSWLN+ AP +I +W+ LAE F
Subjt:  ALRLTLFPYSLRDGAKSWLNSFAPGSIRTWDELAENF

U5CUI2 Retrotrans_gag domain-containing protein2.5e-4369.35Show/hide
Query:  QAENPILIANDRTRAIRAYAVPMFNELNPGIARPQIQAANFEMKPVMFQMLQTVGQFHGLSSEDPHLHLKSFLGVSDSFVIQGVPRDALRLTLFPYSLRD
        Q  NPI++A+DR RAIR YA PMFNELNPGI RP+IQA  FE+KPVMFQMLQTVGQF G+ +EDPHLHL+SFL VSDSF IQGV  + LRL LFP+SLRD
Subjt:  QAENPILIANDRTRAIRAYAVPMFNELNPGIARPQIQAANFEMKPVMFQMLQTVGQFHGLSSEDPHLHLKSFLGVSDSFVIQGVPRDALRLTLFPYSLRD

Query:  GAKSWLNSFAPGSIRTWDELAENF
         A+SWLN+  P S+  W++LAE F
Subjt:  GAKSWLNSFAPGSIRTWDELAENF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGTTCTCAAATTTGAAGTCGTCTCAAGGGCTTTACAGCTTGTTCTTGAGGTTGAAATCGTCTCAAGTGCTTTGCAGCTTGTTCTTGAAGTTGAAGTCATCTCAAG
GGCTTTGCAACTTGTTCTTGAGGTTAAAATCTTCTCAAGGGCTTTGCAGCTTGTTCTTGAGAGGGAGAATGGAGAAATCGGAGAGAAAATCGAGAGGAAAAAGGGAAAAC
GGCTGAAAAGTATCGATTTAACTCCCTCATCTGACCTAAATCGTGAAAGCTGTTGTTTAAATAGCGAAGCGGCATCGAGATGTCGTGGCCAACGCCGAGACGCTGACGGT
TATTTAACCAGTCCTTTGAATACGAAGCGTCGAGACGCTGTGAGGTGGTCTCTCCGTGTGAGAGTGGGTTTTCTAGGGTTTTGCTTGGATTTCACGGCCGTTGATGGTGA
TTTGGTTATCTCGACGGTGAGAGTCCTCTCGGGTTGCGGGTCTTCTTCATCGGCGACTTCCACGGGGTTTGGCGACGTTCGATTCCCACAAGGTCTAGGTTGTTGCCGGC
GGTTTCAGGGTCTCGGGTCTAGGTTGGTTTGCCGGCATCTGTTGGTTCGCCTGCATCTTGGTGTAGTGTCCTTACTTTGGTTTCTGTCAACAAATTTCTTTCGCTTGCTA
GTGTCGGGTCTGGTTGTCTTGGGTTTCGTCTATAATTTGGTTCACCGGCAACTGTCTGTGTCCGGTTTGCACTCCGGGGTTTCGTCTGTCGAGTTGGTGTTGAGATTGTC
TAAGGGTTGTTGGGTTTGGTGTATCTTGAAGCGGCTTGGGAAGGGTTTTCCTTGGAGTACTCTCAGTGCACTTATGGATGATCTTGTGATGCAATGGGAAAATATGGGGT
TATCAAAGGCAGAGTCGACGGCCTTCTCTGTGCCAGCAGACATTCCTCTTTTGGATGAATCAACAGTTCAACTGTGTGTCGTTGGCAAGGTTTTCTCTTCCAAACCAGTG
AACGCTGATGCCTTTCGTCGAGTAATGTTATCGGTTTGGAGTGTCCATCGCTCTACCCAGATTGAACCTTGGGGGGATAATGCCTTCGTAATTCGGTTCCATTCCGTCAC
TGAAAAACGAAGAATTATGAGTTTGGGCCCTTGGACTTTTGATAAGTCTCTGCTGGTTCTGGTGTCTCCTCGGGGATCGGATGACCCATCTCTCCTGGACTTTTCATGTT
GTGAGTTTTTGGTTCATATCACGAAAGTTCCGTTGAATCATCATACAACAGCTATGGCTCGTGCTCTTGGTAGCATGGTGGGTCACGTGGTTGAGTTGCGGGTTGTTCCA
TTTCGGCGTGTTATTGCGAGTGCTTCAGAGGAGGGTGGTGGGCATCCAGATAGTCAGGGGGGATCAGGTATGTCTGGTAGAGGGAGAGGGTGGGGGCAGTGGGATCATTC
GGAGGGTGATAACTGCCCAAAAGATTATGCTGCTGAGCGACTGGAGGGAGCAAATTCTATGCTGCAGCAAAACTGGGAGCAGAAACTGCCACATCACAGCTCCATAATTC
CGATAAAACCCAATCATTTTATTATCTTTGAAACCATTAGGAAGTTACGCAAAATAGATAAAGTGGAAGCTCATTCAGACCTTGGATTGATAATATTACTTGCTGCAGAC
TGTGTATACTTGCACAGGAATTCTAGAGTATTTTATACTACATTTTTACTCACTCTAGGAACCCAACAAGTTTTTGGCGCCGTTGCCGGGGACTTGAATAAGTTTTTATC
TGATCTGTTTTTGTCCAGCAGCAGCAAACCCCCAGCAGAATCCGTTGCTGCAGAAAACCCACTGTTTGAGCAAAATGAGCAGCGAAATAATCAGGCTGAGAATCCTATCT
TGATAGCGAACGATAGGACCAGAGCCATTCGAGCATATGCTGTCCCGATGTTTAATGAGTTGAATCCAGGGATTGCACGTCCCCAAATCCAAGCGGCGAATTTTGAAATG
AAACCGGTAATGTTTCAGATGTTGCAAACCGTGGGGCAATTCCATGGTTTGTCATCTGAAGACCCTCATTTACATCTTAAGTCTTTTCTAGGAGTTAGTGATTCTTTTGT
AATTCAAGGAGTGCCTAGAGATGCTCTTAGATTAACTTTGTTCCCGTATTCTCTTAGAGATGGAGCAAAGTCATGGTTAAACTCTTTTGCTCCAGGATCAATTAGGACGT
GGGATGAGTTAGCTGAAAATTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGTTCTCAAATTTGAAGTCGTCTCAAGGGCTTTACAGCTTGTTCTTGAGGTTGAAATCGTCTCAAGTGCTTTGCAGCTTGTTCTTGAAGTTGAAGTCATCTCAAG
GGCTTTGCAACTTGTTCTTGAGGTTAAAATCTTCTCAAGGGCTTTGCAGCTTGTTCTTGAGAGGGAGAATGGAGAAATCGGAGAGAAAATCGAGAGGAAAAAGGGAAAAC
GGCTGAAAAGTATCGATTTAACTCCCTCATCTGACCTAAATCGTGAAAGCTGTTGTTTAAATAGCGAAGCGGCATCGAGATGTCGTGGCCAACGCCGAGACGCTGACGGT
TATTTAACCAGTCCTTTGAATACGAAGCGTCGAGACGCTGTGAGGTGGTCTCTCCGTGTGAGAGTGGGTTTTCTAGGGTTTTGCTTGGATTTCACGGCCGTTGATGGTGA
TTTGGTTATCTCGACGGTGAGAGTCCTCTCGGGTTGCGGGTCTTCTTCATCGGCGACTTCCACGGGGTTTGGCGACGTTCGATTCCCACAAGGTCTAGGTTGTTGCCGGC
GGTTTCAGGGTCTCGGGTCTAGGTTGGTTTGCCGGCATCTGTTGGTTCGCCTGCATCTTGGTGTAGTGTCCTTACTTTGGTTTCTGTCAACAAATTTCTTTCGCTTGCTA
GTGTCGGGTCTGGTTGTCTTGGGTTTCGTCTATAATTTGGTTCACCGGCAACTGTCTGTGTCCGGTTTGCACTCCGGGGTTTCGTCTGTCGAGTTGGTGTTGAGATTGTC
TAAGGGTTGTTGGGTTTGGTGTATCTTGAAGCGGCTTGGGAAGGGTTTTCCTTGGAGTACTCTCAGTGCACTTATGGATGATCTTGTGATGCAATGGGAAAATATGGGGT
TATCAAAGGCAGAGTCGACGGCCTTCTCTGTGCCAGCAGACATTCCTCTTTTGGATGAATCAACAGTTCAACTGTGTGTCGTTGGCAAGGTTTTCTCTTCCAAACCAGTG
AACGCTGATGCCTTTCGTCGAGTAATGTTATCGGTTTGGAGTGTCCATCGCTCTACCCAGATTGAACCTTGGGGGGATAATGCCTTCGTAATTCGGTTCCATTCCGTCAC
TGAAAAACGAAGAATTATGAGTTTGGGCCCTTGGACTTTTGATAAGTCTCTGCTGGTTCTGGTGTCTCCTCGGGGATCGGATGACCCATCTCTCCTGGACTTTTCATGTT
GTGAGTTTTTGGTTCATATCACGAAAGTTCCGTTGAATCATCATACAACAGCTATGGCTCGTGCTCTTGGTAGCATGGTGGGTCACGTGGTTGAGTTGCGGGTTGTTCCA
TTTCGGCGTGTTATTGCGAGTGCTTCAGAGGAGGGTGGTGGGCATCCAGATAGTCAGGGGGGATCAGGTATGTCTGGTAGAGGGAGAGGGTGGGGGCAGTGGGATCATTC
GGAGGGTGATAACTGCCCAAAAGATTATGCTGCTGAGCGACTGGAGGGAGCAAATTCTATGCTGCAGCAAAACTGGGAGCAGAAACTGCCACATCACAGCTCCATAATTC
CGATAAAACCCAATCATTTTATTATCTTTGAAACCATTAGGAAGTTACGCAAAATAGATAAAGTGGAAGCTCATTCAGACCTTGGATTGATAATATTACTTGCTGCAGAC
TGTGTATACTTGCACAGGAATTCTAGAGTATTTTATACTACATTTTTACTCACTCTAGGAACCCAACAAGTTTTTGGCGCCGTTGCCGGGGACTTGAATAAGTTTTTATC
TGATCTGTTTTTGTCCAGCAGCAGCAAACCCCCAGCAGAATCCGTTGCTGCAGAAAACCCACTGTTTGAGCAAAATGAGCAGCGAAATAATCAGGCTGAGAATCCTATCT
TGATAGCGAACGATAGGACCAGAGCCATTCGAGCATATGCTGTCCCGATGTTTAATGAGTTGAATCCAGGGATTGCACGTCCCCAAATCCAAGCGGCGAATTTTGAAATG
AAACCGGTAATGTTTCAGATGTTGCAAACCGTGGGGCAATTCCATGGTTTGTCATCTGAAGACCCTCATTTACATCTTAAGTCTTTTCTAGGAGTTAGTGATTCTTTTGT
AATTCAAGGAGTGCCTAGAGATGCTCTTAGATTAACTTTGTTCCCGTATTCTCTTAGAGATGGAGCAAAGTCATGGTTAAACTCTTTTGCTCCAGGATCAATTAGGACGT
GGGATGAGTTAGCTGAAAATTTTTGA
Protein sequenceShow/hide protein sequence
MLVLKFEVVSRALQLVLEVEIVSSALQLVLEVEVISRALQLVLEVKIFSRALQLVLERENGEIGEKIERKKGKRLKSIDLTPSSDLNRESCCLNSEAASRCRGQRRDADG
YLTSPLNTKRRDAVRWSLRVRVGFLGFCLDFTAVDGDLVISTVRVLSGCGSSSSATSTGFGDVRFPQGLGCCRRFQGLGSRLVCRHLLVRLHLGVVSLLWFLSTNFFRLL
VSGLVVLGFVYNLVHRQLSVSGLHSGVSSVELVLRLSKGCWVWCILKRLGKGFPWSTLSALMDDLVMQWENMGLSKAESTAFSVPADIPLLDESTVQLCVVGKVFSSKPV
NADAFRRVMLSVWSVHRSTQIEPWGDNAFVIRFHSVTEKRRIMSLGPWTFDKSLLVLVSPRGSDDPSLLDFSCCEFLVHITKVPLNHHTTAMARALGSMVGHVVELRVVP
FRRVIASASEEGGGHPDSQGGSGMSGRGRGWGQWDHSEGDNCPKDYAAERLEGANSMLQQNWEQKLPHHSSIIPIKPNHFIIFETIRKLRKIDKVEAHSDLGLIILLAAD
CVYLHRNSRVFYTTFLLTLGTQQVFGAVAGDLNKFLSDLFLSSSSKPPAESVAAENPLFEQNEQRNNQAENPILIANDRTRAIRAYAVPMFNELNPGIARPQIQAANFEM
KPVMFQMLQTVGQFHGLSSEDPHLHLKSFLGVSDSFVIQGVPRDALRLTLFPYSLRDGAKSWLNSFAPGSIRTWDELAENF