; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028450 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028450
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:22023804..22024274
RNA-Seq ExpressionLag0028450
SyntenyLag0028450
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]4.7e-2336.99Show/hide
Query:  VDDMVERWSTLGLSEEESTAVPVPENVPLLDDSTVQVYGVGKVITSRFVNPDALRRVMLSVWNAIRSTKIEGLGDNIFVVRFHSVSEKRRDMNSGPWNFD
        +D++ + W     + +E+  V +    P+L    V++  V K+ TS+ ++ +A+R VM SVW    ST+ E LG NI+V+ F S+SEK R ++SGPW F+
Subjt:  VDDMVERWSTLGLSEEESTAVPVPENVPLLDDSTVQVYGVGKVITSRFVNPDALRRVMLSVWNAIRSTKIEGLGDNIFVVRFHSVSEKRRDMNSGPWNFD

Query:  KALFVLVSLAGSDSPALLDFSWCAFWVHINNVLLNFLTPAMARALG
        K+L VL S   ++ P  ++F++CAFW+ I+N+    ++  MA  LG
Subjt:  KALFVLVSLAGSDSPALLDFSWCAFWVHINNVLLNFLTPAMARALG

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]4.4e-2135.62Show/hide
Query:  VDDMVERWSTLGLSEEESTAVPVPENVPLLDDSTVQVYGVGKVITSRFVNPDALRRVMLSVWNAIRSTKIEGLGDNIFVVRFHSVSEKRRDMNSGPWNFD
        +D++ E W    L++E+   + +    PL+    VQ Y VGK+ TS+ ++ +A R VM S+W    ST IE  G N++V+ F S++EK R + SGPW+F+
Subjt:  VDDMVERWSTLGLSEEESTAVPVPENVPLLDDSTVQVYGVGKVITSRFVNPDALRRVMLSVWNAIRSTKIEGLGDNIFVVRFHSVSEKRRDMNSGPWNFD

Query:  KALFVLVSLAGSDSPALLDFSWCAFWVHINNVLLNFLTPAMARALG
         +L VL S   +D P  ++F++ A W+ I+ +    +   MA+ LG
Subjt:  KALFVLVSLAGSDSPALLDFSWCAFWVHINNVLLNFLTPAMARALG

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]2.6e-2136.3Show/hide
Query:  VDDMVERWSTLGLSEEESTAVPVPENVPLLDDSTVQVYGVGKVITSRFVNPDALRRVMLSVWNAIRSTKIEGLGDNIFVVRFHSVSEKRRDMNSGPWNFD
        +DD+ + W    L +EE   + +    P+L    +Q+  VGK+  S+ +  +A   VM  VW    ST+IE  G NI+V+ F +++EK R  + GPW FD
Subjt:  VDDMVERWSTLGLSEEESTAVPVPENVPLLDDSTVQVYGVGKVITSRFVNPDALRRVMLSVWNAIRSTKIEGLGDNIFVVRFHSVSEKRRDMNSGPWNFD

Query:  KALFVLVSLAGSDSPALLDFSWCAFWVHINNVLLNFLTPAMARALG
        K+L +LV    ++ P  +D S CAFWV I+ +    +T  MA+ LG
Subjt:  KALFVLVSLAGSDSPALLDFSWCAFWVHINNVLLNFLTPAMARALG

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]4.1e-2743.15Show/hide
Query:  VDDMVERWSTLGLSEEESTAVPVPENVPLLDDSTVQVYGVGKVITSRFVNPDALRRVMLSVWNAIRSTKIEGLGDNIFVVRFHSVSEKRRDMNSGPWNFD
        +D++ E W    L+ EE     V    P+L    +Q+ GVGK+ TS+ ++  AL  VM  VW    ST+IE  G NI+V+ F ++ EK+R ++SGPW FD
Subjt:  VDDMVERWSTLGLSEEESTAVPVPENVPLLDDSTVQVYGVGKVITSRFVNPDALRRVMLSVWNAIRSTKIEGLGDNIFVVRFHSVSEKRRDMNSGPWNFD

Query:  KALFVLVSLAGSDSPALLDFSWCAFWVHINNVLLNFLTPAMARALG
        K+LFVLVS   +D P  +DF +CAFWV I+ +   +LT  MA+ LG
Subjt:  KALFVLVSLAGSDSPALLDFSWCAFWVHINNVLLNFLTPAMARALG

XP_024043038.1 uncharacterized protein LOC112099799 [Citrus clementina]9.2e-1933.56Show/hide
Query:  DDMVERWSTLGLSEEESTAVPVPENVPLLDDSTVQVYGVGKVITSRFVNPDALRRVMLSVWNAIRSTKIEGLGDNIFVVRFHSVSEKRRDMNSGPWNFDK
        D+++ +   + + EE+   V +  ++    +  +    +GKV+ SR VN + L+  +  VW   +  KIE LG+NIF+ RF   ++K+R ++ GPW+FD+
Subjt:  DDMVERWSTLGLSEEESTAVPVPENVPLLDDSTVQVYGVGKVITSRFVNPDALRRVMLSVWNAIRSTKIEGLGDNIFVVRFHSVSEKRRDMNSGPWNFDK

Query:  ALFVLVSLAGSDSPALLDFSWCAFWVHINNVLLNFLTPAMARALGG
        AL VL    G        FSW +FWV I NV +  +     +ALGG
Subjt:  ALFVLVSLAGSDSPALLDFSWCAFWVHINNVLLNFLTPAMARALGG

TrEMBL top hitse value%identityAlignment
A0A2N9IPS8 Reverse transcriptase domain-containing protein3.2e-1733.33Show/hide
Query:  DDMVERWSTLGLSEEESTAVPVPENVPLLDDSTV---QVYG----VGKVITSRFVNPDALRRVMLSVWNAIRSTKIEGLGDNIFVVRFHSVSEKRRDMNS
        ++++E W    L+E+ES           LDD  +   +V G    +GK+IT R+ N +AL+  ML +W   R   ++ +GDN+FV +F +  E+ R M+ 
Subjt:  DDMVERWSTLGLSEEESTAVPVPENVPLLDDSTV---QVYG----VGKVITSRFVNPDALRRVMLSVWNAIRSTKIEGLGDNIFVVRFHSVSEKRRDMNS

Query:  GPWNFDKALFVLVSLAGSDSPALLDFSWCAFWVHINNVLLNFLTPAMARALGG
         PW FD  L  L    GS   + + F  C FWVH + V L ++T      +GG
Subjt:  GPWNFDKALFVLVSLAGSDSPALLDFSWCAFWVHINNVLLNFLTPAMARALGG

A0A6J1D765 uncharacterized protein LOC1110179022.3e-2336.99Show/hide
Query:  VDDMVERWSTLGLSEEESTAVPVPENVPLLDDSTVQVYGVGKVITSRFVNPDALRRVMLSVWNAIRSTKIEGLGDNIFVVRFHSVSEKRRDMNSGPWNFD
        +D++ + W     + +E+  V +    P+L    V++  V K+ TS+ ++ +A+R VM SVW    ST+ E LG NI+V+ F S+SEK R ++SGPW F+
Subjt:  VDDMVERWSTLGLSEEESTAVPVPENVPLLDDSTVQVYGVGKVITSRFVNPDALRRVMLSVWNAIRSTKIEGLGDNIFVVRFHSVSEKRRDMNSGPWNFD

Query:  KALFVLVSLAGSDSPALLDFSWCAFWVHINNVLLNFLTPAMARALG
        K+L VL S   ++ P  ++F++CAFW+ I+N+    ++  MA  LG
Subjt:  KALFVLVSLAGSDSPALLDFSWCAFWVHINNVLLNFLTPAMARALG

A0A6J1DP89 uncharacterized protein LOC1110229322.1e-2135.62Show/hide
Query:  VDDMVERWSTLGLSEEESTAVPVPENVPLLDDSTVQVYGVGKVITSRFVNPDALRRVMLSVWNAIRSTKIEGLGDNIFVVRFHSVSEKRRDMNSGPWNFD
        +D++ E W    L++E+   + +    PL+    VQ Y VGK+ TS+ ++ +A R VM S+W    ST IE  G N++V+ F S++EK R + SGPW+F+
Subjt:  VDDMVERWSTLGLSEEESTAVPVPENVPLLDDSTVQVYGVGKVITSRFVNPDALRRVMLSVWNAIRSTKIEGLGDNIFVVRFHSVSEKRRDMNSGPWNFD

Query:  KALFVLVSLAGSDSPALLDFSWCAFWVHINNVLLNFLTPAMARALG
         +L VL S   +D P  ++F++ A W+ I+ +    +   MA+ LG
Subjt:  KALFVLVSLAGSDSPALLDFSWCAFWVHINNVLLNFLTPAMARALG

A0A6J1DVS4 uncharacterized protein LOC1110235551.3e-2136.3Show/hide
Query:  VDDMVERWSTLGLSEEESTAVPVPENVPLLDDSTVQVYGVGKVITSRFVNPDALRRVMLSVWNAIRSTKIEGLGDNIFVVRFHSVSEKRRDMNSGPWNFD
        +DD+ + W    L +EE   + +    P+L    +Q+  VGK+  S+ +  +A   VM  VW    ST+IE  G NI+V+ F +++EK R  + GPW FD
Subjt:  VDDMVERWSTLGLSEEESTAVPVPENVPLLDDSTVQVYGVGKVITSRFVNPDALRRVMLSVWNAIRSTKIEGLGDNIFVVRFHSVSEKRRDMNSGPWNFD

Query:  KALFVLVSLAGSDSPALLDFSWCAFWVHINNVLLNFLTPAMARALG
        K+L +LV    ++ P  +D S CAFWV I+ +    +T  MA+ LG
Subjt:  KALFVLVSLAGSDSPALLDFSWCAFWVHINNVLLNFLTPAMARALG

A0A6J1DYG3 uncharacterized protein LOC1110246762.0e-2743.15Show/hide
Query:  VDDMVERWSTLGLSEEESTAVPVPENVPLLDDSTVQVYGVGKVITSRFVNPDALRRVMLSVWNAIRSTKIEGLGDNIFVVRFHSVSEKRRDMNSGPWNFD
        +D++ E W    L+ EE     V    P+L    +Q+ GVGK+ TS+ ++  AL  VM  VW    ST+IE  G NI+V+ F ++ EK+R ++SGPW FD
Subjt:  VDDMVERWSTLGLSEEESTAVPVPENVPLLDDSTVQVYGVGKVITSRFVNPDALRRVMLSVWNAIRSTKIEGLGDNIFVVRFHSVSEKRRDMNSGPWNFD

Query:  KALFVLVSLAGSDSPALLDFSWCAFWVHINNVLLNFLTPAMARALG
        K+LFVLVS   +D P  +DF +CAFWV I+ +   +LT  MA+ LG
Subjt:  KALFVLVSLAGSDSPALLDFSWCAFWVHINNVLLNFLTPAMARALG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCTGTGGGTTTAAGCGGTGTGGATGATATGGTGGAGCGATGGAGCACGTTGGGTTTATCGGAGGAGGAGTCGACTGCGGTTCCAGTGCCGGAGAACGTTCCTTT
GCTTGATGACTCGACGGTACAGGTCTACGGGGTGGGTAAGGTGATCACTAGCCGCTTCGTGAATCCCGACGCTTTGCGGAGGGTGATGTTATCAGTGTGGAATGCTATTA
GGTCCACGAAGATTGAAGGGCTGGGCGACAACATCTTTGTGGTTCGTTTTCATTCGGTGAGCGAAAAACGGCGGGATATGAATTCGGGGCCTTGGAATTTTGATAAAGCA
TTGTTTGTACTAGTCTCCCTTGCTGGTTCGGATAGCCCTGCCTTACTTGATTTCTCCTGGTGCGCTTTCTGGGTTCACATTAATAATGTGCTGTTGAATTTTCTTACTCC
AGCAATGGCGCGGGCTTTGGGGGGGGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCTGTGGGTTTAAGCGGTGTGGATGATATGGTGGAGCGATGGAGCACGTTGGGTTTATCGGAGGAGGAGTCGACTGCGGTTCCAGTGCCGGAGAACGTTCCTTT
GCTTGATGACTCGACGGTACAGGTCTACGGGGTGGGTAAGGTGATCACTAGCCGCTTCGTGAATCCCGACGCTTTGCGGAGGGTGATGTTATCAGTGTGGAATGCTATTA
GGTCCACGAAGATTGAAGGGCTGGGCGACAACATCTTTGTGGTTCGTTTTCATTCGGTGAGCGAAAAACGGCGGGATATGAATTCGGGGCCTTGGAATTTTGATAAAGCA
TTGTTTGTACTAGTCTCCCTTGCTGGTTCGGATAGCCCTGCCTTACTTGATTTCTCCTGGTGCGCTTTCTGGGTTCACATTAATAATGTGCTGTTGAATTTTCTTACTCC
AGCAATGGCGCGGGCTTTGGGGGGGGTGTGA
Protein sequenceShow/hide protein sequence
MVSVGLSGVDDMVERWSTLGLSEEESTAVPVPENVPLLDDSTVQVYGVGKVITSRFVNPDALRRVMLSVWNAIRSTKIEGLGDNIFVVRFHSVSEKRRDMNSGPWNFDKA
LFVLVSLAGSDSPALLDFSWCAFWVHINNVLLNFLTPAMARALGGV