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Lag0028451 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028451
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCyclin-dependent kinases regulatory subunit 1
Genome locationchr8:22046523..22047678
RNA-Seq ExpressionLag0028451
SyntenyLag0028451
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
GO:0016538 - cyclin-dependent protein serine/threonine kinase regulator activity (molecular function)
GO:0016853 - isomerase activity (molecular function)
InterPro domainsIPR000789 - Cyclin-dependent kinase, regulatory subunit
IPR029045 - ClpP/crotonase-like domain superfamily
IPR036858 - Cyclin-dependent kinase, regulatory subunit superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575117.1 putative enoyl-CoA hydratase 1, peroxisomal, partial [Cucurbita argyrosperma subsp. sororia]7.3e-1975.71Show/hide
Query:  MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAIA
        MM DLA+AF  LD DES RVIVLSG GRA CS V+L A EDVFKGD KDVE+ PVVQMERCRKPII A+A
Subjt:  MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAIA

XP_023006283.1 probable enoyl-CoA hydratase 1, peroxisomal isoform X1 [Cucurbita maxima]3.3e-1975.71Show/hide
Query:  MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAIA
        MM DLA+AF  LD DES RVIVLSG GRA CS V+L A EDVFKGD KDVE+ PVVQMERCRKPII A+A
Subjt:  MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAIA

XP_023006284.1 probable enoyl-CoA hydratase 1, peroxisomal isoform X2 [Cucurbita maxima]3.3e-1975.71Show/hide
Query:  MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAIA
        MM DLA+AF  LD DES RVIVLSG GRA CS V+L A EDVFKGD KDVE+ PVVQMERCRKPII A+A
Subjt:  MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAIA

XP_023548460.1 probable enoyl-CoA hydratase 1, peroxisomal [Cucurbita pepo subsp. pepo]4.3e-1975.71Show/hide
Query:  MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAIA
        MM DLA+AF  LD DES RVIVLSG GRA CS V+L A EDVFKGD KDVE+ PVVQMERCRKPII A+A
Subjt:  MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAIA

XP_038876166.1 probable enoyl-CoA hydratase 1, peroxisomal [Benincasa hispida]3.3e-1977.14Show/hide
Query:  MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAIA
        MM DLA+AF  LD D+S RVIVLSG GRA CS V+L A EDVFKGD KDVES PVVQMERCRKPII AIA
Subjt:  MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAIA

TrEMBL top hitse value%identityAlignment
A0A5D3BTZ4 Putative enoyl-CoA hydratase 1, peroxisomal7.9e-1974.29Show/hide
Query:  MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAIA
        MM+DLARAF  LD D+S RVI+LSG GRA CS V+L A EDVFKGD KDVES PV QME CRKPII AIA
Subjt:  MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAIA

A0A6J1H7Z0 probable enoyl-CoA hydratase 1, peroxisomal3.5e-1975.71Show/hide
Query:  MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAIA
        MM DLA+AF  LD DES RVIVLSG GRA CS V+L A EDVFKGD KDVE+ PVVQMERCRKPII A+A
Subjt:  MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAIA

A0A6J1L1R6 probable enoyl-CoA hydratase 1, peroxisomal isoform X21.6e-1975.71Show/hide
Query:  MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAIA
        MM DLA+AF  LD DES RVIVLSG GRA CS V+L A EDVFKGD KDVE+ PVVQMERCRKPII A+A
Subjt:  MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAIA

A0A6J1L4H0 probable enoyl-CoA hydratase 1, peroxisomal isoform X11.6e-1975.71Show/hide
Query:  MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAIA
        MM DLA+AF  LD DES RVIVLSG GRA CS V+L A EDVFKGD KDVE+ PVVQMERCRKPII A+A
Subjt:  MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAIA

A0A7J0GL57 Enoyl-CoA hydratase/isomerase A7.9e-1972.86Show/hide
Query:  MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAIA
        MM DLARAF  LD D+S RV+VLSG GR+ CS V+L A EDVFKGD KD ES PVVQMERCRKPII AI+
Subjt:  MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAIA

SwissProt top hitse value%identityAlignment
A2XCH8 Cyclin-dependent kinases regulatory subunit 11.9e-0996.67Show/hide
Query:  KHVVLPPEVAKLLPKNRLLSENEWRAIGVQ
        +HVVLPPEVAKLLPKNRLLSENEWRAIGVQ
Subjt:  KHVVLPPEVAKLLPKNRLLSENEWRAIGVQ

O23249 Cyclin-dependent kinases regulatory subunit 11.9e-0996.67Show/hide
Query:  KHVVLPPEVAKLLPKNRLLSENEWRAIGVQ
        +HVVLPPEVAKLLPKNRLLSENEWRAIGVQ
Subjt:  KHVVLPPEVAKLLPKNRLLSENEWRAIGVQ

Q6NL24 Probable enoyl-CoA hydratase 1, peroxisomal1.9e-1762.32Show/hide
Query:  MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAI
        MM+DLA+AF  +D DES +V++ +G GR+ CS V+L A E VFKGD KD E+ PVVQMER RKPII AI
Subjt:  MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAI

Q6PS57 Cyclin-dependent kinases regulatory subunit 11.9e-0996.67Show/hide
Query:  KHVVLPPEVAKLLPKNRLLSENEWRAIGVQ
        +HVVLPPEVAKLLPKNRLLSENEWRAIGVQ
Subjt:  KHVVLPPEVAKLLPKNRLLSENEWRAIGVQ

Q9SJJ5 Cyclin-dependent kinases regulatory subunit 21.2e-0890Show/hide
Query:  KHVVLPPEVAKLLPKNRLLSENEWRAIGVQ
        +HVVLPPEVAKLLPKNR+LSE+EWRAIGVQ
Subjt:  KHVVLPPEVAKLLPKNRLLSENEWRAIGVQ

Arabidopsis top hitse value%identityAlignment
AT2G27960.1 cyclin-dependent kinase-subunit 11.3e-1096.67Show/hide
Query:  KHVVLPPEVAKLLPKNRLLSENEWRAIGVQ
        +HVVLPPEVAKLLPKNRLLSENEWRAIGVQ
Subjt:  KHVVLPPEVAKLLPKNRLLSENEWRAIGVQ

AT2G27970.1 CDK-subunit 28.7e-1090Show/hide
Query:  KHVVLPPEVAKLLPKNRLLSENEWRAIGVQ
        +HVVLPPEVAKLLPKNR+LSE+EWRAIGVQ
Subjt:  KHVVLPPEVAKLLPKNRLLSENEWRAIGVQ

AT4G16210.1 enoyl-CoA hydratase/isomerase A1.3e-1862.32Show/hide
Query:  MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAI
        MM+DLA+AF  +D DES +V++ +G GR+ CS V+L A E VFKGD KD E+ PVVQMER RKPII AI
Subjt:  MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAI

AT5G43280.1 delta(3,5),delta(2,4)-dienoyl-CoA isomerase 19.3e-0426.51Show/hide
Query:  MDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDV----------------FKGDAKDVESHPVVQMERCRKPIIRAI
        ++  +A + LD +    VI+LSG G+  CS ++LN++  +                 +   K +++  +  +E+CRKP+I AI
Subjt:  MDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDV----------------FKGDAKDVESHPVVQMERCRKPIIRAI

AT5G43280.2 delta(3,5),delta(2,4)-dienoyl-CoA isomerase 19.3e-0426.51Show/hide
Query:  MDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDV----------------FKGDAKDVESHPVVQMERCRKPIIRAI
        ++  +A + LD +    VI+LSG G+  CS ++LN++  +                 +   K +++  +  +E+CRKP+I AI
Subjt:  MDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDV----------------FKGDAKDVESHPVVQMERCRKPIIRAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGGATTTGGCTCGGGCATTCAACGGATTGGACTGCGACGAGTCAGGGCGAGTCATCGTGCTCTCTGGTTTAGGTCGAGCATTATGTTCCTATGTAAACCTTAA
TGCAATGGAGGACGTCTTCAAGGGAGATGCGAAGGATGTTGAATCCCATCCGGTTGTGCAAATGGAACGCTGCCGGAAGCCGATCATCAGAGCGATTGCAGATTTAGGAT
ATTTCCTTCATGGGTATTATCTCAGAAACTCCCAAGGATCATCAGAATTAATAAAGCTCCTGAAGCATGTGGTGCTTCCTCCTGAAGTAGCGAAACTTCTTCCTAAGAAT
CGCCTTCTTTCTGAAAATGAATGGCGAGCGATTGGGGTTCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGATGATGGATTTGGCTCGGGCATTCAACGGATTGGACTGCGACGAGTCAGGGCGAGTCATCGTGCTCTCTGGTTTAGGTCGAGCATTATGTTCCTATGTAAACCTTAA
TGCAATGGAGGACGTCTTCAAGGGAGATGCGAAGGATGTTGAATCCCATCCGGTTGTGCAAATGGAACGCTGCCGGAAGCCGATCATCAGAGCGATTGCAGATTTAGGAT
ATTTCCTTCATGGGTATTATCTCAGAAACTCCCAAGGATCATCAGAATTAATAAAGCTCCTGAAGCATGTGGTGCTTCCTCCTGAAGTAGCGAAACTTCTTCCTAAGAAT
CGCCTTCTTTCTGAAAATGAATGGCGAGCGATTGGGGTTCAATAG
Protein sequenceShow/hide protein sequence
MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAIADLGYFLHGYYLRNSQGSSELIKLLKHVVLPPEVAKLLPKN
RLLSENEWRAIGVQ