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Lag0028454 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028454
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Genome locationchr8:22171219..22171957
RNA-Seq ExpressionLag0028454
SyntenyLag0028454
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145141.1 uncharacterized protein LOC111014656 [Momordica charantia]8.0e-4056.16Show/hide
Query:  AKRHVVKPIVRYEFEVEDGHLGGRVNLHARTCTCRELEYYELPCSHAIAACTYRHINYHTLCSRVYHVDPLIDAYAQPIQPLGHESEWKRSPQFVDVKVL
        A+RH+V  I ++ FEV DG+L   V+L  +TCT RE +Y+++PCSHAIA  + R IN +TLC   Y V+  + AYA+PI P+G  S WK SP FV++ V 
Subjt:  AKRHVVKPIVRYEFEVEDGHLGGRVNLHARTCTCRELEYYELPCSHAIAACTYRHINYHTLCSRVYHVDPLIDAYAQPIQPLGHESEWKRSPQFVDVKVL

Query:  PPQRVSRVGCRQMLRIPSTGEVQHVRKCSRCGNRGHKRKTCRQPLN
        PP++V RVG RQ +RIPSTGEV+  RKCSRCG  GH RKTCR+PLN
Subjt:  PPQRVSRVGCRQMLRIPSTGEVQHVRKCSRCGNRGHKRKTCRQPLN

XP_022154922.1 uncharacterized protein LOC111022067 [Momordica charantia]4.0e-3955.48Show/hide
Query:  AKRHVVKPIVRYEFEVEDGHLGGRVNLHARTCTCRELEYYELPCSHAIAACTYRHINYHTLCSRVYHVDPLIDAYAQPIQPLGHESEWKRSPQFVDVKVL
        A+RH+V  I ++ FEV DG+L G V+  ++TCTCRE +Y+++ CSHAIAA + R IN +TLC   Y V+  + AYA+PI P+G  S WK SP FV++ V 
Subjt:  AKRHVVKPIVRYEFEVEDGHLGGRVNLHARTCTCRELEYYELPCSHAIAACTYRHINYHTLCSRVYHVDPLIDAYAQPIQPLGHESEWKRSPQFVDVKVL

Query:  PPQRVSRVGCRQMLRIPSTGEVQHVRKCSRCGNRGHKRKTCRQPLN
        PP++V RVG RQ +RI STGEV+   KCSRCG  GH RKTCR+PLN
Subjt:  PPQRVSRVGCRQMLRIPSTGEVQHVRKCSRCGNRGHKRKTCRQPLN

XP_022156122.1 uncharacterized protein LOC111023087 [Momordica charantia]3.6e-4056.16Show/hide
Query:  AKRHVVKPIVRYEFEVEDGHLGGRVNLHARTCTCRELEYYELPCSHAIAACTYRHINYHTLCSRVYHVDPLIDAYAQPIQPLGHESEWKRSPQFVDVKVL
        A+RH+V  I ++ FEV DG+L G V+L ++TCTCRE +Y+++ CS AIAA + R IN +TLC  VY V+  + AYA+PI P+G  S WK SP FV++ V 
Subjt:  AKRHVVKPIVRYEFEVEDGHLGGRVNLHARTCTCRELEYYELPCSHAIAACTYRHINYHTLCSRVYHVDPLIDAYAQPIQPLGHESEWKRSPQFVDVKVL

Query:  PPQRVSRVGCRQMLRIPSTGEVQHVRKCSRCGNRGHKRKTCRQPLN
        PP++V RVG RQ ++IPSTGEV+  R CSRCG  GH RKTCR+PLN
Subjt:  PPQRVSRVGCRQMLRIPSTGEVQHVRKCSRCGNRGHKRKTCRQPLN

XP_022158655.1 uncharacterized protein LOC111025117 [Momordica charantia]1.8e-3954.36Show/hide
Query:  AKKAKRHVVKPIVRYEFEVEDGHLGGRVNLHARTCTCRELEYYELPCSHAIAACTYRHINYHTLCSRVYHVDPLIDAYAQPIQPLGHESEWKRSPQFVDV
        A  ++RH+V  I ++ FEV DG+L G V+L ++TCTCRE +Y+++ CSHAIAA   R IN +TLC   Y V+  + A+A+PI  +G  + WK SP FV++
Subjt:  AKKAKRHVVKPIVRYEFEVEDGHLGGRVNLHARTCTCRELEYYELPCSHAIAACTYRHINYHTLCSRVYHVDPLIDAYAQPIQPLGHESEWKRSPQFVDV

Query:  KVLPPQRVSRVGCRQMLRIPSTGEVQHVRKCSRCGNRGHKRKTCRQPLN
         V PP++V RVG RQ +RIPSTGEV+  RKCSRCG  GH RKTCR+PLN
Subjt:  KVLPPQRVSRVGCRQMLRIPSTGEVQHVRKCSRCGNRGHKRKTCRQPLN

XP_022159268.1 uncharacterized protein LOC111025678 [Momordica charantia]1.4e-3955.17Show/hide
Query:  AKRHVVKPIVRYEFEVEDGHLGGRVNLHARTCTCRELEYYELPCSHAIAACTYRHINYHTLCSRVYHVDPLIDAYAQPIQPLGHESEWKRSPQFVDVKVL
        A+RHVV  I ++ F+V DG+L G V+L+A  C+CRE +Y+++PCSHAIAA T R+IN ++LC   Y  +  I AYA+PI P+GH S W  SP+FV++ V 
Subjt:  AKRHVVKPIVRYEFEVEDGHLGGRVNLHARTCTCRELEYYELPCSHAIAACTYRHINYHTLCSRVYHVDPLIDAYAQPIQPLGHESEWKRSPQFVDVKVL

Query:  PPQRVSRVGCRQMLRIPSTGEVQHVRKCSRCGNRGHKRKTCRQPL
        PP+ V RVG R+ +RIPSTGEV+  RKC RCG  GH RKTC +PL
Subjt:  PPQRVSRVGCRQMLRIPSTGEVQHVRKCSRCGNRGHKRKTCRQPL

TrEMBL top hitse value%identityAlignment
A0A6J1CVG8 uncharacterized protein LOC1110146563.9e-4056.16Show/hide
Query:  AKRHVVKPIVRYEFEVEDGHLGGRVNLHARTCTCRELEYYELPCSHAIAACTYRHINYHTLCSRVYHVDPLIDAYAQPIQPLGHESEWKRSPQFVDVKVL
        A+RH+V  I ++ FEV DG+L   V+L  +TCT RE +Y+++PCSHAIA  + R IN +TLC   Y V+  + AYA+PI P+G  S WK SP FV++ V 
Subjt:  AKRHVVKPIVRYEFEVEDGHLGGRVNLHARTCTCRELEYYELPCSHAIAACTYRHINYHTLCSRVYHVDPLIDAYAQPIQPLGHESEWKRSPQFVDVKVL

Query:  PPQRVSRVGCRQMLRIPSTGEVQHVRKCSRCGNRGHKRKTCRQPLN
        PP++V RVG RQ +RIPSTGEV+  RKCSRCG  GH RKTCR+PLN
Subjt:  PPQRVSRVGCRQMLRIPSTGEVQHVRKCSRCGNRGHKRKTCRQPLN

A0A6J1DLB0 uncharacterized protein LOC1110219691.9e-3952.98Show/hide
Query:  AKKAKRHVVKPIVRYEFEVEDGHLGGRVNLHARTCTCRELEYYELPCSHAIAACTYRHINYHTLCSRVYHVDPLIDAYAQPIQPLGHESEWKRSPQFVDV
        A++A+ H V+PI R+EFEV DG    RVN++++TCTC++  YYE+PCSHAIA    R+I+ HTLCS  Y +D LI AY +P+ PLG E +W     +V  
Subjt:  AKKAKRHVVKPIVRYEFEVEDGHLGGRVNLHARTCTCRELEYYELPCSHAIAACTYRHINYHTLCSRVYHVDPLIDAYAQPIQPLGHESEWKRSPQFVDV

Query:  KVLPPQRVSRVGCRQMLRIPSTGEVQHVRKCSRCGNRGHKRKTCRQPLNNS
         + PP+ V RVG  Q  RIPS GEV+ V KC RCGN GH  KTCRQPL  +
Subjt:  KVLPPQRVSRVGCRQMLRIPSTGEVQHVRKCSRCGNRGHKRKTCRQPLNNS

A0A6J1DR67 uncharacterized protein LOC1110230871.7e-4056.16Show/hide
Query:  AKRHVVKPIVRYEFEVEDGHLGGRVNLHARTCTCRELEYYELPCSHAIAACTYRHINYHTLCSRVYHVDPLIDAYAQPIQPLGHESEWKRSPQFVDVKVL
        A+RH+V  I ++ FEV DG+L G V+L ++TCTCRE +Y+++ CS AIAA + R IN +TLC  VY V+  + AYA+PI P+G  S WK SP FV++ V 
Subjt:  AKRHVVKPIVRYEFEVEDGHLGGRVNLHARTCTCRELEYYELPCSHAIAACTYRHINYHTLCSRVYHVDPLIDAYAQPIQPLGHESEWKRSPQFVDVKVL

Query:  PPQRVSRVGCRQMLRIPSTGEVQHVRKCSRCGNRGHKRKTCRQPLN
        PP++V RVG RQ ++IPSTGEV+  R CSRCG  GH RKTCR+PLN
Subjt:  PPQRVSRVGCRQMLRIPSTGEVQHVRKCSRCGNRGHKRKTCRQPLN

A0A6J1DWF8 uncharacterized protein LOC1110251178.6e-4054.36Show/hide
Query:  AKKAKRHVVKPIVRYEFEVEDGHLGGRVNLHARTCTCRELEYYELPCSHAIAACTYRHINYHTLCSRVYHVDPLIDAYAQPIQPLGHESEWKRSPQFVDV
        A  ++RH+V  I ++ FEV DG+L G V+L ++TCTCRE +Y+++ CSHAIAA   R IN +TLC   Y V+  + A+A+PI  +G  + WK SP FV++
Subjt:  AKKAKRHVVKPIVRYEFEVEDGHLGGRVNLHARTCTCRELEYYELPCSHAIAACTYRHINYHTLCSRVYHVDPLIDAYAQPIQPLGHESEWKRSPQFVDV

Query:  KVLPPQRVSRVGCRQMLRIPSTGEVQHVRKCSRCGNRGHKRKTCRQPLN
         V PP++V RVG RQ +RIPSTGEV+  RKCSRCG  GH RKTCR+PLN
Subjt:  KVLPPQRVSRVGCRQMLRIPSTGEVQHVRKCSRCGNRGHKRKTCRQPLN

A0A6J1DYC4 uncharacterized protein LOC1110256786.6e-4055.17Show/hide
Query:  AKRHVVKPIVRYEFEVEDGHLGGRVNLHARTCTCRELEYYELPCSHAIAACTYRHINYHTLCSRVYHVDPLIDAYAQPIQPLGHESEWKRSPQFVDVKVL
        A+RHVV  I ++ F+V DG+L G V+L+A  C+CRE +Y+++PCSHAIAA T R+IN ++LC   Y  +  I AYA+PI P+GH S W  SP+FV++ V 
Subjt:  AKRHVVKPIVRYEFEVEDGHLGGRVNLHARTCTCRELEYYELPCSHAIAACTYRHINYHTLCSRVYHVDPLIDAYAQPIQPLGHESEWKRSPQFVDVKVL

Query:  PPQRVSRVGCRQMLRIPSTGEVQHVRKCSRCGNRGHKRKTCRQPL
        PP+ V RVG R+ +RIPSTGEV+  RKC RCG  GH RKTC +PL
Subjt:  PPQRVSRVGCRQMLRIPSTGEVQHVRKCSRCGNRGHKRKTCRQPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49920.1 MuDR family transposase8.9e-0531.91Show/hide
Query:  GRVNLHARTCTCRELEYYELPCSHAIAACTYRHINYHTLCSRVYHVDPLIDAYAQPIQPLGHESEWKRSPQFVDVKVL-------PPQRVSRVG
        G V L+  TCTC E +  + PC HA+A C    IN        Y V+     Y+    P+   S W   P+   V  L       PP +VS  G
Subjt:  GRVNLHARTCTCRELEYYELPCSHAIAACTYRHINYHTLCSRVYHVDPLIDAYAQPIQPLGHESEWKRSPQFVDVKVL-------PPQRVSRVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTACTGACAGCAACTCCCAGAAAATGTTAAGACATACCTACAAGGGGTCGGAATTGAGAGCAAAGAAGGCAAAGAGGCACGTGGTCAAACCTATTGTTCGATATGA
GTTTGAGGTCGAGGATGGACATTTGGGTGGACGTGTCAACCTTCACGCTAGAACATGCACCTGTCGTGAACTTGAGTATTACGAGCTTCCATGCTCCCATGCAATCGCTG
CATGCACTTATCGACATATCAACTATCATACTCTTTGTTCTAGAGTCTACCATGTGGACCCTTTGATAGATGCATATGCACAACCCATACAACCCCTTGGGCATGAGTCG
GAGTGGAAGAGATCACCTCAATTCGTCGATGTGAAAGTCTTGCCTCCTCAAAGAGTGTCTAGGGTTGGTTGTCGTCAGATGTTGAGAATACCTTCTACGGGAGAAGTGCA
GCATGTCCGCAAATGCAGCCGATGCGGGAATAGAGGTCATAAGAGAAAAACATGTAGACAACCACTGAATAATTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTACTGACAGCAACTCCCAGAAAATGTTAAGACATACCTACAAGGGGTCGGAATTGAGAGCAAAGAAGGCAAAGAGGCACGTGGTCAAACCTATTGTTCGATATGA
GTTTGAGGTCGAGGATGGACATTTGGGTGGACGTGTCAACCTTCACGCTAGAACATGCACCTGTCGTGAACTTGAGTATTACGAGCTTCCATGCTCCCATGCAATCGCTG
CATGCACTTATCGACATATCAACTATCATACTCTTTGTTCTAGAGTCTACCATGTGGACCCTTTGATAGATGCATATGCACAACCCATACAACCCCTTGGGCATGAGTCG
GAGTGGAAGAGATCACCTCAATTCGTCGATGTGAAAGTCTTGCCTCCTCAAAGAGTGTCTAGGGTTGGTTGTCGTCAGATGTTGAGAATACCTTCTACGGGAGAAGTGCA
GCATGTCCGCAAATGCAGCCGATGCGGGAATAGAGGTCATAAGAGAAAAACATGTAGACAACCACTGAATAATTCTTGA
Protein sequenceShow/hide protein sequence
MSTDSNSQKMLRHTYKGSELRAKKAKRHVVKPIVRYEFEVEDGHLGGRVNLHARTCTCRELEYYELPCSHAIAACTYRHINYHTLCSRVYHVDPLIDAYAQPIQPLGHES
EWKRSPQFVDVKVLPPQRVSRVGCRQMLRIPSTGEVQHVRKCSRCGNRGHKRKTCRQPLNNS