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Lag0028457 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028457
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Genome locationchr8:22180303..22180737
RNA-Seq ExpressionLag0028457
SyntenyLag0028457
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145141.1 uncharacterized protein LOC111014656 [Momordica charantia]1.4e-3754.93Show/hide
Query:  MVKPIARYEFEVEDGHLGGRVNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEWKMSPQFVDVEVLPPRR
        +V  I ++ FEV DG+L   V+L  +TCT R+F+Y+++PCSHAIA  + + I+ +TLC   Y V+S + AYA+PI  +G  S WK SP FV+++V PP++
Subjt:  MVKPIARYEFEVEDGHLGGRVNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEWKMSPQFVDVEVLPPRR

Query:  VSRVGRRQTLRIPSTGEVQHVRKCSRCGNKGHKRKTCRQLLN
        V RVGRRQT+RIPSTGEV+  RKCSRCG  GH RKTCR+ LN
Subjt:  VSRVGRRQTLRIPSTGEVQHVRKCSRCGNKGHKRKTCRQLLN
XP_022154803.1 uncharacterized protein LOC111021969 [Momordica charantia]6.3e-3854.55Show/hide
Query:  VKPIARYEFEVEDGHLGGRVNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEWKMSPQFVDVEVLPPRRV
        V+PI R+EFEV DG    RVN++ +TCTC+ F YYE+PCSHAIA    ++I  HTLCS  Y +D+LI AY +P+  LG E +W +   +V   + PPR V
Subjt:  VKPIARYEFEVEDGHLGGRVNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEWKMSPQFVDVEVLPPRRV

Query:  SRVGRRQTLRIPSTGEVQHVRKCSRCGNKGHKRKTCRQLLNNS
         RVGR QT RIPS GEV+ V KC RCGN GH  KTCRQ L  +
Subjt:  SRVGRRQTLRIPSTGEVQHVRKCSRCGNKGHKRKTCRQLLNNS
XP_022156122.1 uncharacterized protein LOC111023087 [Momordica charantia]1.4e-3754.93Show/hide
Query:  MVKPIARYEFEVEDGHLGGRVNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEWKMSPQFVDVEVLPPRR
        +V  I ++ FEV DG+L G V+L  +TCTCR+F+Y+++ CS AIAA + + I+ +TLC  VY V+S + AYA+PI  +G  S WK SP FV+++V PP++
Subjt:  MVKPIARYEFEVEDGHLGGRVNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEWKMSPQFVDVEVLPPRR

Query:  VSRVGRRQTLRIPSTGEVQHVRKCSRCGNKGHKRKTCRQLLN
        V RVGRRQT++IPSTGEV+  R CSRCG  GH RKTCR+ LN
Subjt:  VSRVGRRQTLRIPSTGEVQHVRKCSRCGNKGHKRKTCRQLLN
XP_022158655.1 uncharacterized protein LOC111025117 [Momordica charantia]4.8e-3854.93Show/hide
Query:  MVKPIARYEFEVEDGHLGGRVNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEWKMSPQFVDVEVLPPRR
        +V  I ++ FEV DG+L G V+L  +TCTCR+F+Y+++ CSHAIAA   + I+ +TLC   Y V+S + A+A+PI  +G  + WK SP FV+++V PP++
Subjt:  MVKPIARYEFEVEDGHLGGRVNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEWKMSPQFVDVEVLPPRR

Query:  VSRVGRRQTLRIPSTGEVQHVRKCSRCGNKGHKRKTCRQLLN
        V RVGRRQT+RIPSTGEV+  RKCSRCG  GH RKTCR+ LN
Subjt:  VSRVGRRQTLRIPSTGEVQHVRKCSRCGNKGHKRKTCRQLLN
XP_038895917.1 uncharacterized protein LOC120084090 [Benincasa hispida]2.1e-4155.94Show/hide
Query:  VKPIARYEFEVEDGHLGGRVNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEWKMSPQFVDVEVLPPRRV
        V+PI ++EFE+ DG L GR N+H R CTC  F+YYE+PCSH IAAC  Q+ID  +LCS VY ++S++ AYA+PI+L GH S WK S  F++VE LPP+RV
Subjt:  VKPIARYEFEVEDGHLGGRVNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEWKMSPQFVDVEVLPPRRV

Query:  SRVGRRQTLRIPSTGEVQHVRKCSRCGNKGHKRKTCRQLLNNS
         R+GR +T R PS  E + V +CSRCG KGH +KTC Q  N +
Subjt:  SRVGRRQTLRIPSTGEVQHVRKCSRCGNKGHKRKTCRQLLNNS
TrEMBL top hitse value%identityAlignment
A0A6J1CVG8 uncharacterized protein LOC1110146566.8e-3854.93Show/hide
Query:  MVKPIARYEFEVEDGHLGGRVNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEWKMSPQFVDVEVLPPRR
        +V  I ++ FEV DG+L   V+L  +TCT R+F+Y+++PCSHAIA  + + I+ +TLC   Y V+S + AYA+PI  +G  S WK SP FV+++V PP++
Subjt:  MVKPIARYEFEVEDGHLGGRVNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEWKMSPQFVDVEVLPPRR

Query:  VSRVGRRQTLRIPSTGEVQHVRKCSRCGNKGHKRKTCRQLLN
        V RVGRRQT+RIPSTGEV+  RKCSRCG  GH RKTCR+ LN
Subjt:  VSRVGRRQTLRIPSTGEVQHVRKCSRCGNKGHKRKTCRQLLN
A0A6J1DLB0 uncharacterized protein LOC1110219693.0e-3854.55Show/hide
Query:  VKPIARYEFEVEDGHLGGRVNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEWKMSPQFVDVEVLPPRRV
        V+PI R+EFEV DG    RVN++ +TCTC+ F YYE+PCSHAIA    ++I  HTLCS  Y +D+LI AY +P+  LG E +W +   +V   + PPR V
Subjt:  VKPIARYEFEVEDGHLGGRVNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEWKMSPQFVDVEVLPPRRV

Query:  SRVGRRQTLRIPSTGEVQHVRKCSRCGNKGHKRKTCRQLLNNS
         RVGR QT RIPS GEV+ V KC RCGN GH  KTCRQ L  +
Subjt:  SRVGRRQTLRIPSTGEVQHVRKCSRCGNKGHKRKTCRQLLNNS
A0A6J1DR67 uncharacterized protein LOC1110230876.8e-3854.93Show/hide
Query:  MVKPIARYEFEVEDGHLGGRVNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEWKMSPQFVDVEVLPPRR
        +V  I ++ FEV DG+L G V+L  +TCTCR+F+Y+++ CS AIAA + + I+ +TLC  VY V+S + AYA+PI  +G  S WK SP FV+++V PP++
Subjt:  MVKPIARYEFEVEDGHLGGRVNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEWKMSPQFVDVEVLPPRR

Query:  VSRVGRRQTLRIPSTGEVQHVRKCSRCGNKGHKRKTCRQLLN
        V RVGRRQT++IPSTGEV+  R CSRCG  GH RKTCR+ LN
Subjt:  VSRVGRRQTLRIPSTGEVQHVRKCSRCGNKGHKRKTCRQLLN
A0A6J1DRF6 uncharacterized protein LOC1110236642.6e-3753.57Show/hide
Query:  VKPIARYEFEVEDGHLGGRVNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEWKMSPQFVDVEVLPPRRV
        + PI  ++ EV DG    RVNL+ RTC C++F+Y++ PCSHAIAA TY +++ +TLCS  Y + +LI+ Y +P+  LG + +W +   FVD  V PPR V
Subjt:  VKPIARYEFEVEDGHLGGRVNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEWKMSPQFVDVEVLPPRRV

Query:  SRVGRRQTLRIPSTGEVQHVRKCSRCGNKGHKRKTCRQLL
        SRVGRRQT+RIPS GE + V KC  CGN GH RKTCRQ L
Subjt:  SRVGRRQTLRIPSTGEVQHVRKCSRCGNKGHKRKTCRQLL
A0A6J1DWF8 uncharacterized protein LOC1110251172.3e-3854.93Show/hide
Query:  MVKPIARYEFEVEDGHLGGRVNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEWKMSPQFVDVEVLPPRR
        +V  I ++ FEV DG+L G V+L  +TCTCR+F+Y+++ CSHAIAA   + I+ +TLC   Y V+S + A+A+PI  +G  + WK SP FV+++V PP++
Subjt:  MVKPIARYEFEVEDGHLGGRVNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEWKMSPQFVDVEVLPPRR

Query:  VSRVGRRQTLRIPSTGEVQHVRKCSRCGNKGHKRKTCRQLLN
        V RVGRRQT+RIPSTGEV+  RKCSRCG  GH RKTCR+ LN
Subjt:  VSRVGRRQTLRIPSTGEVQHVRKCSRCGNKGHKRKTCRQLLN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64255.1 MuDR family transposase3.7e-0429.7Show/hide
Query:  MVKPIARYEFEVEDGHLGGR--VNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEWKMSPQFVDV-EVLP
        +V P+    F+V      G   V L   +CTC DF+ Y+ PC HA+A C     +        Y ++ L   YA    +  H  E    P+   V  +LP
Subjt:  MVKPIARYEFEVEDGHLGGR--VNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEWKMSPQFVDV-EVLP

Query:  P
        P
Subjt:  P
AT1G64260.1 MuDR family transposase3.7e-0432.81Show/hide
Query:  VNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEW
        V L+V TCTCR F+ Y+ PC HA+A      I+        Y V+     YA     +   + W
Subjt:  VNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAAACCTATTGCTCGATATGAGTTTGAGGTTGAGGATGGACATTTGGGTGGACGTGTCAACCTTCACGTTAGAACTTGCACCTGTCGTGATTTTGAGTATTACGA
GCTTCCATGCTCCCATGCGATCGCTGCATGCACTTATCAACATATCGACTATCATACTCTTTGTTCCAGAGTCTACCATGTGGACTCTTTGATAGATGCATATGCACAGC
CCATACAACTCCTTGGGCATGAGTCGGAGTGGAAGATGTCACCTCAATTCGTCGATGTGGAAGTCTTGCCTCCTCGAAGAGTGTCTAGGGTTGGTCGTCGTCAGACGTTG
AGAATACCGTCTACGGGAGAAGTGCAGCATGTTCGCAAATGCAGTCGGTGCGGGAATAAGGGTCATAAGAGAAAAACATGCAGACAACTACTTAATAATTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAAACCTATTGCTCGATATGAGTTTGAGGTTGAGGATGGACATTTGGGTGGACGTGTCAACCTTCACGTTAGAACTTGCACCTGTCGTGATTTTGAGTATTACGA
GCTTCCATGCTCCCATGCGATCGCTGCATGCACTTATCAACATATCGACTATCATACTCTTTGTTCCAGAGTCTACCATGTGGACTCTTTGATAGATGCATATGCACAGC
CCATACAACTCCTTGGGCATGAGTCGGAGTGGAAGATGTCACCTCAATTCGTCGATGTGGAAGTCTTGCCTCCTCGAAGAGTGTCTAGGGTTGGTCGTCGTCAGACGTTG
AGAATACCGTCTACGGGAGAAGTGCAGCATGTTCGCAAATGCAGTCGGTGCGGGAATAAGGGTCATAAGAGAAAAACATGCAGACAACTACTTAATAATTCTTGA
Protein sequenceShow/hide protein sequence
MVKPIARYEFEVEDGHLGGRVNLHVRTCTCRDFEYYELPCSHAIAACTYQHIDYHTLCSRVYHVDSLIDAYAQPIQLLGHESEWKMSPQFVDVEVLPPRRVSRVGRRQTL
RIPSTGEVQHVRKCSRCGNKGHKRKTCRQLLNNS