; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028511 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028511
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionmethyl-CpG-binding domain-containing protein 9-like
Genome locationchr8:24015184..24017583
RNA-Seq ExpressionLag0028511
SyntenyLag0028511
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0016570 - histone modification (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001965 - Zinc finger, PHD-type
IPR011011 - Zinc finger, FYVE/PHD-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR019786 - Zinc finger, PHD-type, conserved site
IPR019787 - Zinc finger, PHD-finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588968.1 Methyl-CpG-binding domain-containing protein 9, partial [Cucurbita argyrosperma subsp. sororia]6.9e-7885.8Show/hide
Query:  MELADSSDEHPQLLNDLPNPTDSTTTCSGIGIDLNEIPSPSSFSETLSDTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGHVVVCDGCER
        MELADSSDEH   L D PNP DSTTT SGIGIDLNEIPSPS+FSE LS+TFDVVRSFHDNPP PDG P DVPRGLRGS+C LCGQPEVHGHVVVCDGCER
Subjt:  MELADSSDEHPQLLNDLPNPTDSTTTCSGIGIDLNEIPSPSSFSETLSDTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGHVVVCDGCER

Query:  GFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFR
        GFHLAC  MRGVQALN +DWVC DCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDA  ED EEL GFR
Subjt:  GFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFR

KAG7022736.1 Methyl-CpG-binding domain-containing protein 9 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-7785.8Show/hide
Query:  MELADSSDEHPQLLNDLPNPTDSTTTCSGIGIDLNEIPSPSSFSETLSDTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGHVVVCDGCER
        MELADSSDEH   L D PNP DSTTT SGIGIDLNEIPSPSSFSE LS+TFDVVRSFHDNPP PDG P DVPRGLRGS+C LCGQPEVHGHVVVCDGCER
Subjt:  MELADSSDEHPQLLNDLPNPTDSTTTCSGIGIDLNEIPSPSSFSETLSDTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGHVVVCDGCER

Query:  GFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFR
        GFHLAC  MRGVQALN +DWVC DCFGSGVKSKRWPLGVKSKQLLDINASPP DGDA  ED EEL GFR
Subjt:  GFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFR

XP_022928164.1 methyl-CpG-binding domain-containing protein 9-like [Cucurbita moschata]3.1e-7886.39Show/hide
Query:  MELADSSDEHPQLLNDLPNPTDSTTTCSGIGIDLNEIPSPSSFSETLSDTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGHVVVCDGCER
        MELADSSDEH   L D PNP DSTTT SGIGIDLNEIPSPSSFSE LS+TFDVVRSFHDNPP PDG P DVPRGLRGS+C LCGQPEVHGHVVVCDGCER
Subjt:  MELADSSDEHPQLLNDLPNPTDSTTTCSGIGIDLNEIPSPSSFSETLSDTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGHVVVCDGCER

Query:  GFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFR
        GFHLAC  MRGVQALN +DWVC DCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDA  ED EEL GFR
Subjt:  GFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFR

XP_023531672.1 methyl-CpG-binding domain-containing protein 9-like [Cucurbita pepo subsp. pepo]2.0e-7785.8Show/hide
Query:  MELADSSDEHPQLLNDLPNPTDSTTTCSGIGIDLNEIPSPSSFSETLSDTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGHVVVCDGCER
        MELADSSDEH   L D PNP DSTT  SGIGIDLNEIPSPSSFSE LS+TFDVVRSFHDNPP PDG P DVPRGLRGS+C LCGQPEVHGHVVVCDGCER
Subjt:  MELADSSDEHPQLLNDLPNPTDSTTTCSGIGIDLNEIPSPSSFSETLSDTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGHVVVCDGCER

Query:  GFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFR
        GFHLAC  MRGVQALN +DWVC DCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDA  ED EEL GFR
Subjt:  GFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFR

XP_038904732.1 methyl-CpG-binding domain-containing protein 9 isoform X1 [Benincasa hispida]2.6e-7784.88Show/hide
Query:  MELADSSDEHPQLLNDLPNPTDSTT---TCSGIGIDLNEIPSPSSFSETLSDTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGHVVVCDG
        MELADSSDEHPQ LNDLPNPTDSTT   + +GIGIDLNEIPSPSSFSETLSDTFDVVRSFHDNPP  DGDP  VPRG+RGS+C LCGQPEV GHVVVCDG
Subjt:  MELADSSDEHPQLLNDLPNPTDSTT---TCSGIGIDLNEIPSPSSFSETLSDTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGHVVVCDG

Query:  CERGFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFR
        CERGFHLACTGMR   ALN +DWVC DCF SGVKSKRWPLGVKSKQLLDINASPPSDGDAY ED EEL G R
Subjt:  CERGFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFR

TrEMBL top hitse value%identityAlignment
A0A0A0LHX5 Uncharacterized protein2.4e-7683.14Show/hide
Query:  MELADSSDEHPQLLNDLPNPTDSTT---TCSGIGIDLNEIPSPSSFSETLSDTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGHVVVCDG
        MELADSSDEHPQ LN LPNPTDSTT   T +GIGIDLNEIPSPSSFSETLSD+FDVVR+FHDNPP  DGDP  VPRG+RGS+C LCGQPEV GHVVVCDG
Subjt:  MELADSSDEHPQLLNDLPNPTDSTT---TCSGIGIDLNEIPSPSSFSETLSDTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGHVVVCDG

Query:  CERGFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFR
        CERGFHLACTGMRG  ALN +DWVC +CF +GVKSKRWPLGVKSKQLLDINASPPSDGDAY ED EEL G R
Subjt:  CERGFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFR

A0A1S3B7P9 methyl-CpG-binding domain-containing protein 95.3e-7674.62Show/hide
Query:  MELADSSDEHPQLLNDLPNPTDSTTTC---SGIGIDLNEIPSPSSFSETLSDTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGHVVVCDG
        MELADSSDEHPQ LN LPNPTDSTT     +GIGIDLNEIPSPSSFSETLSD+FDVVR+FHDNPP  DGDP  VPRG+RGS+C LCGQPEV GHVVVCDG
Subjt:  MELADSSDEHPQLLNDLPNPTDSTTTC---SGIGIDLNEIPSPSSFSETLSDTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGHVVVCDG

Query:  CERGFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFRAFIPSHQESRENLLPHPKVKFTKLL
        CERGFHLACTGMRG  ALN +DWVC +CF +GVKSKRWPLGVKSKQLLDINASPPSDGDAY ED EEL G R         R    P    K+  LL
Subjt:  CERGFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFRAFIPSHQESRENLLPHPKVKFTKLL

A0A5A7UEN4 Methyl-CpG-binding domain-containing protein 95.3e-7674.62Show/hide
Query:  MELADSSDEHPQLLNDLPNPTDSTTTC---SGIGIDLNEIPSPSSFSETLSDTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGHVVVCDG
        MELADSSDEHPQ LN LPNPTDSTT     +GIGIDLNEIPSPSSFSETLSD+FDVVR+FHDNPP  DGDP  VPRG+RGS+C LCGQPEV GHVVVCDG
Subjt:  MELADSSDEHPQLLNDLPNPTDSTTTC---SGIGIDLNEIPSPSSFSETLSDTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGHVVVCDG

Query:  CERGFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFRAFIPSHQESRENLLPHPKVKFTKLL
        CERGFHLACTGMRG  ALN +DWVC +CF +GVKSKRWPLGVKSKQLLDINASPPSDGDAY ED EEL G R         R    P    K+  LL
Subjt:  CERGFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFRAFIPSHQESRENLLPHPKVKFTKLL

A0A6J1EK30 methyl-CpG-binding domain-containing protein 9-like1.5e-7886.39Show/hide
Query:  MELADSSDEHPQLLNDLPNPTDSTTTCSGIGIDLNEIPSPSSFSETLSDTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGHVVVCDGCER
        MELADSSDEH   L D PNP DSTTT SGIGIDLNEIPSPSSFSE LS+TFDVVRSFHDNPP PDG P DVPRGLRGS+C LCGQPEVHGHVVVCDGCER
Subjt:  MELADSSDEHPQLLNDLPNPTDSTTTCSGIGIDLNEIPSPSSFSETLSDTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGHVVVCDGCER

Query:  GFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFR
        GFHLAC  MRGVQALN +DWVC DCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDA  ED EEL GFR
Subjt:  GFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFR

A0A6J1JG50 methyl-CpG-binding domain-containing protein 9-like1.7e-7785.21Show/hide
Query:  MELADSSDEHPQLLNDLPNPTDSTTTCSGIGIDLNEIPSPSSFSETLSDTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGHVVVCDGCER
        MELADSS+EH     D PNP DSTTT SGIGIDLNEIPSPSSFSE LS+TFDVVRSFHDNPP PDG P DVPRGLRGS+C LCGQPEVHGHVVVCDGCER
Subjt:  MELADSSDEHPQLLNDLPNPTDSTTTCSGIGIDLNEIPSPSSFSETLSDTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGHVVVCDGCER

Query:  GFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFR
        GFHLAC  MRGVQALN +DWVC DCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDA  ED EEL GFR
Subjt:  GFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFR

SwissProt top hitse value%identityAlignment
Q2T9V9 PHD finger protein 102.3e-0439.13Show/hide
Query:  CALCGQPEVHGHVVVCDGCERGFHLACTGMRGVQALNSDDWVCRDC
        C +CGQP     ++ CD C+RG+H  C G+    A+ S  W+C  C
Subjt:  CALCGQPEVHGHVVVCDGCERGFHLACTGMRGVQALNSDDWVCRDC

Q63ZP1 PHD finger protein 101.1e-0441.3Show/hide
Query:  CALCGQPEVHGHVVVCDGCERGFHLACTGMRGVQALNSDDWVCRDC
        C +CGQP     ++ CD C+RG+H  C G+    AL S  W+C  C
Subjt:  CALCGQPEVHGHVVVCDGCERGFHLACTGMRGVQALNSDDWVCRDC

Q8WUB8 PHD finger protein 102.3e-0439.13Show/hide
Query:  CALCGQPEVHGHVVVCDGCERGFHLACTGMRGVQALNSDDWVCRDC
        C +CGQP     ++ CD C+RG+H  C G+    A+ S  W+C  C
Subjt:  CALCGQPEVHGHVVVCDGCERGFHLACTGMRGVQALNSDDWVCRDC

Q9D8M7 PHD finger protein 102.3e-0439.13Show/hide
Query:  CALCGQPEVHGHVVVCDGCERGFHLACTGMRGVQALNSDDWVCRDC
        C +CGQP     ++ CD C+RG+H  C G+    A+ S  W+C  C
Subjt:  CALCGQPEVHGHVVVCDGCERGFHLACTGMRGVQALNSDDWVCRDC

Q9SGH2 Methyl-CpG-binding domain-containing protein 91.6e-3244.94Show/hide
Query:  MELADSSDEHPQLLNDLPNPTDSTTTCSGIGIDLNEIPSPSSFSETLS---------DTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGH
        ME  DS++E    L D         + S +GIDLNEIP+ ++     +         +  +VVRS HDNP    G P +VP   R + C  CG+PE    
Subjt:  MELADSSDEHPQLLNDLPNPTDSTTTCSGIGIDLNEIPSPSSFSETLS---------DTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGH

Query:  VVVCDGCERGFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFR
        VVVCD CERGFH++C    GV+A  S DW+C DC   G +SK WPLGVKSK +LD+NASPPSD + Y    EE S  R
Subjt:  VVVCDGCERGFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFR

Arabidopsis top hitse value%identityAlignment
AT3G01460.1 methyl-CPG-binding domain 91.1e-3344.94Show/hide
Query:  MELADSSDEHPQLLNDLPNPTDSTTTCSGIGIDLNEIPSPSSFSETLS---------DTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGH
        ME  DS++E    L D         + S +GIDLNEIP+ ++     +         +  +VVRS HDNP    G P +VP   R + C  CG+PE    
Subjt:  MELADSSDEHPQLLNDLPNPTDSTTTCSGIGIDLNEIPSPSSFSETLS---------DTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGH

Query:  VVVCDGCERGFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFR
        VVVCD CERGFH++C    GV+A  S DW+C DC   G +SK WPLGVKSK +LD+NASPPSD + Y    EE S  R
Subjt:  VVVCDGCERGFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTCGCCGATTCCAGCGACGAACACCCACAACTCCTCAACGACCTTCCCAACCCCACTGACTCCACCACCACCTGCTCCGGCATCGGCATCGATCTCAACGAGAT
CCCTTCCCCTTCCTCCTTCTCTGAAACCCTATCCGATACATTCGACGTCGTCCGCTCCTTCCACGACAACCCTCCGTCGCCCGATGGCGACCCCACCGATGTCCCGCGCG
GCCTACGTGGCTCGCTCTGTGCCTTGTGCGGCCAGCCGGAGGTGCACGGCCACGTCGTCGTCTGCGATGGATGCGAGCGGGGCTTTCATTTGGCTTGCACCGGAATGCGG
GGGGTTCAGGCGTTGAATTCCGACGATTGGGTCTGTAGGGACTGTTTCGGCAGCGGGGTCAAGAGTAAGCGCTGGCCGCTTGGGGTTAAGTCGAAGCAGCTCCTCGATAT
CAACGCTTCTCCGCCGAGTGATGGTGATGCGTATGCCGAGGATGTGGAGGAATTGTCGGGTTTCAGGGCTTTTATCCCTTCACATCAGGAGTCAAGAGAAAACCTTCTCC
CTCATCCTAAAGTTAAGTTTACAAAGCTCCTCTTCAGGAACCATTGGAGAAAATTCCTCGACTTCCAATTTGTGGCTCTTGTAGCAAGCGGCACGTCGGGCAATGTTGGT
CAAGGAAAAAGGTTTGCTTCAAGTGTGGCAATGAGGGCCACTTTGCAAGGGTGTGCACTCAGGAAGAACCAATCACCGAAAGGCCTTGCCAACACCAGCACAAGGAGGTT
AATATTTTTCTCTTACTTTTCTCTTCTCGCCGGCGTAAAGGACCCACGAACGAGTCGTCTCTCTCCATCATCCCTCTTTTGCGTGCCCCGCCAGCCTCCCTGTGGTTTCT
CGTTCGCCAACCTCTATCTCGTCATCCTCGCATGTTTTGCCTTCGTCTCCCTCTCATTTTCTTCATCCGTGTGCGCAGCAGGTGTCCGTGGTTGTAGCATGCTTATCATA
GATCGCATCATAACAACTCAACATACATCAACATTATTAGGGGCAGATCTACATTGGGGCAAGGGGCACGTGCCGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACTCGCCGATTCCAGCGACGAACACCCACAACTCCTCAACGACCTTCCCAACCCCACTGACTCCACCACCACCTGCTCCGGCATCGGCATCGATCTCAACGAGAT
CCCTTCCCCTTCCTCCTTCTCTGAAACCCTATCCGATACATTCGACGTCGTCCGCTCCTTCCACGACAACCCTCCGTCGCCCGATGGCGACCCCACCGATGTCCCGCGCG
GCCTACGTGGCTCGCTCTGTGCCTTGTGCGGCCAGCCGGAGGTGCACGGCCACGTCGTCGTCTGCGATGGATGCGAGCGGGGCTTTCATTTGGCTTGCACCGGAATGCGG
GGGGTTCAGGCGTTGAATTCCGACGATTGGGTCTGTAGGGACTGTTTCGGCAGCGGGGTCAAGAGTAAGCGCTGGCCGCTTGGGGTTAAGTCGAAGCAGCTCCTCGATAT
CAACGCTTCTCCGCCGAGTGATGGTGATGCGTATGCCGAGGATGTGGAGGAATTGTCGGGTTTCAGGGCTTTTATCCCTTCACATCAGGAGTCAAGAGAAAACCTTCTCC
CTCATCCTAAAGTTAAGTTTACAAAGCTCCTCTTCAGGAACCATTGGAGAAAATTCCTCGACTTCCAATTTGTGGCTCTTGTAGCAAGCGGCACGTCGGGCAATGTTGGT
CAAGGAAAAAGGTTTGCTTCAAGTGTGGCAATGAGGGCCACTTTGCAAGGGTGTGCACTCAGGAAGAACCAATCACCGAAAGGCCTTGCCAACACCAGCACAAGGAGGTT
AATATTTTTCTCTTACTTTTCTCTTCTCGCCGGCGTAAAGGACCCACGAACGAGTCGTCTCTCTCCATCATCCCTCTTTTGCGTGCCCCGCCAGCCTCCCTGTGGTTTCT
CGTTCGCCAACCTCTATCTCGTCATCCTCGCATGTTTTGCCTTCGTCTCCCTCTCATTTTCTTCATCCGTGTGCGCAGCAGGTGTCCGTGGTTGTAGCATGCTTATCATA
GATCGCATCATAACAACTCAACATACATCAACATTATTAGGGGCAGATCTACATTGGGGCAAGGGGCACGTGCCGCCATGA
Protein sequenceShow/hide protein sequence
MELADSSDEHPQLLNDLPNPTDSTTTCSGIGIDLNEIPSPSSFSETLSDTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGHVVVCDGCERGFHLACTGMR
GVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFRAFIPSHQESRENLLPHPKVKFTKLLFRNHWRKFLDFQFVALVASGTSGNVG
QGKRFASSVAMRATLQGCALRKNQSPKGLANTSTRRLIFFSYFSLLAGVKDPRTSRLSPSSLFCVPRQPPCGFSFANLYLVILACFAFVSLSFSSSVCAAGVRGCSMLII
DRIITTQHTSTLLGADLHWGKGHVPP