CuGenDBv2

Gene ID	Lag0028541
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Unknown protein
Genome location	chr8:24696581..24698107
RNA-Seq Expression	Lag0028541
Synteny	Lag0028541
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004140887.1 uncharacterized protein LOC101204847 isoform X2 [Cucumis sativus]

3.0e-56

94.44

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Query:  LRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYVIFGTLVLLNSGCFMFLLH
        LRHGLVG TMGSLWRLGANWSTSIFLCTIVRA GAVGYVL+SSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIY IFGTLV LN GCFMFLLH
Subjt:  LRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYVIFGTLVLLNSGCFMFLLH

Query:  LLYSVFLTRLGLKTSLTLPRWLEKAM
        LLYS+FLTRLGLKTSLTLPRWLEKAM
Subjt:  LLYSVFLTRLGLKTSLTLPRWLEKAM

XP_011656560.1 uncharacterized protein LOC101204847 isoform X1 [Cucumis sativus]

3.0e-56

94.44

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Query:  LRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYVIFGTLVLLNSGCFMFLLH
        LRHGLVG TMGSLWRLGANWSTSIFLCTIVRA GAVGYVL+SSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIY IFGTLV LN GCFMFLLH
Subjt:  LRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYVIFGTLVLLNSGCFMFLLH

Query:  LLYSVFLTRLGLKTSLTLPRWLEKAM
        LLYS+FLTRLGLKTSLTLPRWLEKAM
Subjt:  LLYSVFLTRLGLKTSLTLPRWLEKAM

XP_016900136.1 PREDICTED: uncharacterized protein LOC103488678 isoform X5 [Cucumis melo]

5.1e-56

94.44

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Query:  LRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYVIFGTLVLLNSGCFMFLLH
        LRHGLVG TMGSLWRLGANWSTSIFLCTIVRA GAVGYVL+SSFLIRENIL+LITINIHASLTLIFTAWGVNLIPSMNAIY IFGTLV LN GCFMFLLH
Subjt:  LRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYVIFGTLVLLNSGCFMFLLH

Query:  LLYSVFLTRLGLKTSLTLPRWLEKAM
        LLYSVFLTRLGLKTSLTLPRWLEKAM
Subjt:  LLYSVFLTRLGLKTSLTLPRWLEKAM

XP_016900140.1 PREDICTED: uncharacterized protein LOC103488678 isoform X6 [Cucumis melo]

5.1e-56

94.44

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Query:  LRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYVIFGTLVLLNSGCFMFLLH
        LRHGLVG TMGSLWRLGANWSTSIFLCTIVRA GAVGYVL+SSFLIRENIL+LITINIHASLTLIFTAWGVNLIPSMNAIY IFGTLV LN GCFMFLLH
Subjt:  LRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYVIFGTLVLLNSGCFMFLLH

Query:  LLYSVFLTRLGLKTSLTLPRWLEKAM
        LLYSVFLTRLGLKTSLTLPRWLEKAM
Subjt:  LLYSVFLTRLGLKTSLTLPRWLEKAM

XP_038885169.1 uncharacterized protein LOC120075651 [Benincasa hispida]

3.9e-56

95.24

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Query:  LRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYVIFGTLVLLNSGCFMFLLH
        LRHGLVG TMGSLWRLGANWSTSIFLCTIVRALGAVGYVL+SSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIY IFG LV LN GCFMFLLH
Subjt:  LRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYVIFGTLVLLNSGCFMFLLH

Query:  LLYSVFLTRLGLKTSLTLPRWLEKAM
        LLYSVFLTRLGLKTSLTLPRWLEKAM
Subjt:  LLYSVFLTRLGLKTSLTLPRWLEKAM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K8H0 Uncharacterized protein

1.5e-56

94.44

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Query:  LRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYVIFGTLVLLNSGCFMFLLH
        LRHGLVG TMGSLWRLGANWSTSIFLCTIVRA GAVGYVL+SSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIY IFGTLV LN GCFMFLLH
Subjt:  LRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYVIFGTLVLLNSGCFMFLLH

Query:  LLYSVFLTRLGLKTSLTLPRWLEKAM
        LLYS+FLTRLGLKTSLTLPRWLEKAM
Subjt:  LLYSVFLTRLGLKTSLTLPRWLEKAM

A0A1S4DVX7 uncharacterized protein LOC103488678 isoform X5

2.5e-56

94.44

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Query:  LRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYVIFGTLVLLNSGCFMFLLH
        LRHGLVG TMGSLWRLGANWSTSIFLCTIVRA GAVGYVL+SSFLIRENIL+LITINIHASLTLIFTAWGVNLIPSMNAIY IFGTLV LN GCFMFLLH
Subjt:  LRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYVIFGTLVLLNSGCFMFLLH

Query:  LLYSVFLTRLGLKTSLTLPRWLEKAM
        LLYSVFLTRLGLKTSLTLPRWLEKAM
Subjt:  LLYSVFLTRLGLKTSLTLPRWLEKAM

A0A1S4DWP5 uncharacterized protein LOC103488678 isoform X6

2.5e-56

94.44

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Query:  LRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYVIFGTLVLLNSGCFMFLLH
        LRHGLVG TMGSLWRLGANWSTSIFLCTIVRA GAVGYVL+SSFLIRENIL+LITINIHASLTLIFTAWGVNLIPSMNAIY IFGTLV LN GCFMFLLH
Subjt:  LRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYVIFGTLVLLNSGCFMFLLH

Query:  LLYSVFLTRLGLKTSLTLPRWLEKAM
        LLYSVFLTRLGLKTSLTLPRWLEKAM
Subjt:  LLYSVFLTRLGLKTSLTLPRWLEKAM

A0A6J1ETG3 uncharacterized protein LOC111435817

3.3e-56

96.03

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Query:  LRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYVIFGTLVLLNSGCFMFLLH
        LRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTA GVNLIPSMNAIY IFGTLV+LN GCFMFLLH
Subjt:  LRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYVIFGTLVLLNSGCFMFLLH

Query:  LLYSVFLTRLGLKTSLTLPRWLEKAM
        LLYS+FLTRLGLKTSLTLPRWLEKAM
Subjt:  LLYSVFLTRLGLKTSLTLPRWLEKAM

A0A6J1I3S1 uncharacterized protein LOC111468904

1.2e-55

95.24

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Query:  LRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYVIFGTLVLLNSGCFMFLLH
        LRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTA GVNLIPSM+AIY IFGTLV+LN GCFMFLLH
Subjt:  LRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYVIFGTLVLLNSGCFMFLLH

Query:  LLYSVFLTRLGLKTSLTLPRWLEKAM
        LLYS+FLTRLGLKTSLTLPRWLEKAM
Subjt:  LLYSVFLTRLGLKTSLTLPRWLEKAM

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G26180.1 unknown protein

2.0e-45

72.22

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Query:  LRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYVIFGTLVLLNSGCFMFLLH
        L HGLVGL +GSLW +GA+W  SIFLCT+VRALG +GYVL SSFLIRENILA+ITINIHASL+ +FTA G+N++PSM+ IY+IFGT++LLNSG F+ LLH
Subjt:  LRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYVIFGTLVLLNSGCFMFLLH

Query:  LLYSVFLTRLGLKTSLTLPRWLEKAM
        LLYS+FLTRLG+K+SL LP WL+KA+
Subjt:  LLYSVFLTRLGLKTSLTLPRWLEKAM

Sequences

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CDS sequence

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ATGAGTTTAAAATCAAATGTATTCCTTCTCAACCGTACAGACCTGTTTTACATTGCTCTTAGGCATGGTTTAGTGGGGCTGACAATGGGCTCCTTGTGGAGGCTTGGAGC
AAATTGGAGTACTTCAATCTTCCTGTGCACAATCGTTCGGGCGCTCGGGGCAGTGGGGTATGTCTTAATATCTTCATTCTTGATTAGAGAGAACATACTAGCTCTGATCA
CTATAAATATTCATGCTTCCCTCACCCTTATCTTCACTGCTTGGGGTGTAAACTTGATTCCATCAATGAATGCAATATATGTTATCTTTGGGACACTGGTATTGCTGAAC
TCTGGATGCTTCATGTTTTTGCTTCACCTTTTGTACTCCGTATTCCTTACAAGACTTGGTCTGAAGACTTCATTGACATTGCCAAGGTGGCTGGAGAAGGCGATGTAA

mRNA sequence

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Protein sequence

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MSLKSNVFLLNRTDLFYIALRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYVIFGTLVLLN
SGCFMFLLHLLYSVFLTRLGLKTSLTLPRWLEKAM

Lag0028541 (gene) of Sponge gourd (AG-4) v1 genome