; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028558 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028558
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:24918584..24920035
RNA-Seq ExpressionLag0028558
SyntenyLag0028558
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006485824.1 uncharacterized protein LOC102613298 [Citrus sinensis]4.6e-3738.12Show/hide
Query:  CAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAGSNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQVVDLAFTKASFWIQIHNVPFNCL
        C V K+L  +    +   + ++  W+  + T+ ES G NIF  KF S+SEK+R++  GPW FD++++V++ P     V    FT A FW+QIHN+P  C+
Subjt:  CAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAGSNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQVVDLAFTKASFWIQIHNVPFNCL

Query:  SVGMARIWGGEVGEMVEVDWD--GQSAWSVMRVRVIVDIESPLQRGVTMRNKEGKVIWCPIQYEKLPDFCFNYGVIGHSFRACKQEVLKEDGQLQYGDWL
           + +  GG +G++ EV+ D  G+   S +RVR++V++  PL + + ++ ++G  I   I YEKLPDFCF  G+IGH FR C     +    L YG W+
Subjt:  SVGMARIWGGEVGEMVEVDWD--GQSAWSVMRVRVIVDIESPLQRGVTMRNKEGKVIWCPIQYEKLPDFCFNYGVIGHSFRACKQEVLKEDGQLQYGDWL

Query:  RA
        RA
Subjt:  RA

XP_015380691.1 uncharacterized protein LOC107174364 [Citrus sinensis]2.7e-3735.61Show/hide
Query:  CAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAGSNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQVVDLAFTKASFWIQIHNVPFNCL
        C V KVL  +  N + F S ++ VW+  +  + ES G+N F  KF  +++K+RV+  GPW FD+A++V+  P    ++   +FT  +FWIQI NVP  C+
Subjt:  CAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAGSNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQVVDLAFTKASFWIQIHNVPFNCL

Query:  SVGMARIWGGEVG--EMVEVDWDGQSAWSVMRVRVIVDIESPLQRGVTMRNKEGKVIWCPIQYEKLPDFCFNYGVIGHSFRACKQEVLKEDGQLQYGDWL
           + +  GG +G  E +E D +G+      R+RV+++I  PL++ + ++ +    I  P+ YE+LPDFC+  G+IGH ++ C +   ++  QL YG W+
Subjt:  SVGMARIWGGEVG--EMVEVDWDGQSAWSVMRVRVIVDIESPLQRGVTMRNKEGKVIWCPIQYEKLPDFCFNYGVIGHSFRACKQEVLKEDGQLQYGDWL

Query:  RAVLI
        +A++I
Subjt:  RAVLI

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]4.6e-6146.49Show/hide
Query:  NEKEGKVIAASDPIILLAAENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAGSNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSEND
        +E E   I    PI  L A+N++LC VAK+   K  + +A  SV+KSVW+VH  TR E  G NI+ I FKS SEK RV+ SGPW F+K+++V+ SP+  +
Subjt:  NEKEGKVIAASDPIILLAAENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAGSNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSEND

Query:  QVVDLAFTKASFWIQIHNVPFNCLSVGMARIWGGEVGEMVEVDWDGQSAWS--VMRVRVIVDIESPLQRGVTMRNKEGKVIWCPIQYEKLPDFCFNYGVI
        Q +D+ F   +FWIQIHN+PF C+S  MA I G ++G++ E++ DG   W+   +RVRV +D+  PL+RG+ ++N +GK IWCP++YEKLPDFC+  G I
Subjt:  QVVDLAFTKASFWIQIHNVPFNCLSVGMARIWGGEVGEMVEVDWDGQSAWS--VMRVRVIVDIESPLQRGVTMRNKEGKVIWCPIQYEKLPDFCFNYGVI

Query:  GHSFRACKQ--EVLKEDGQLQYGDWLRAVLIRKWSFKGAEEREVRRDEERLGGGMKREKVHSAEGGGKGKG
        GHS R C+Q  +V+  +   QYGDWLRA L++K S    EE EV     R G G      H   GG  G+G
Subjt:  GHSFRACKQ--EVLKEDGQLQYGDWLRAVLIRKWSFKGAEEREVRRDEERLGGGMKREKVHSAEGGGKGKG

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]1.1e-3843.85Show/hide
Query:  EKEGKVIAASDPIILLAAENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAGSNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQ
        EKE  +I  S+   L+  EN+Q  AV K+   K  +V+AF SV+KS+WKVH+ T  E+AG N++ I FKS +EK RV+ SGPW F+ +++V+ SP+  DQ
Subjt:  EKEGKVIAASDPIILLAAENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAGSNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQ

Query:  VVDLAFTKASFWIQIHNVPFNCLSVGMARIWGGEVGEMVEVDWDGQSAWS--VMRVRVIVDIESPLQRGVTMRNKEGKVIWCPIQYE
          D+ F   + WIQIH +PF C+   MA+  G  +GE+ E+D +G   W+   +RVRV +DI  P +RG+ +R  + K  WCP++YE
Subjt:  VVDLAFTKASFWIQIHNVPFNCLSVGMARIWGGEVGEMVEVDWDGQSAWS--VMRVRVIVDIESPLQRGVTMRNKEGKVIWCPIQYE

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]2.7e-4544.17Show/hide
Query:  EKEGKVIAASDPIILLAAENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAGSNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQ
        E++  VI    PI  L  +NIQLCAV K+   K   V+AFASV+K VWK+H  TR E+AG NI+ I FK+ +EK RV   GPW FDK+++++V  +  ++
Subjt:  EKEGKVIAASDPIILLAAENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAGSNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQ

Query:  VVDLAFTKASFWIQIHNVPFNCLSVGMARIWGGEVGEMVEVDWDGQSAWSVMR----VRVIVDIESPLQRGVTMRNKEGKVIWCPIQYEKLPDFCFNYGV
         +D+  +  +FW+QIH + F C++  MA+  G  +GE+ EV  DG S++  +R    VRV +++  PL+RG+ ++  +GK IWCP++YE+LPDFC+  G 
Subjt:  VVDLAFTKASFWIQIHNVPFNCLSVGMARIWGGEVGEMVEVDWDGQSAWSVMR----VRVIVDIESPLQRGVTMRNKEGKVIWCPIQYEKLPDFCFNYGV

Query:  IGHSFR
        +GHS R
Subjt:  IGHSFR

TrEMBL top hitse value%identityAlignment
A0A2P5F130 Zinc knuckle CX2CX4HX4C3.2e-3637.33Show/hide
Query:  ENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAG-SNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQVVDLAFTKASFWIQIHN
        E ++LC V +V  +K  N ++ + V + VW   +  R ES G +NIF   F  +++++RVI  GPW F   +I ++ P E   V  + FTK SFWIQ HN
Subjt:  ENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAG-SNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQVVDLAFTKASFWIQIHN

Query:  VPFNCLSVGMARIWGGEVGEMVEVDWDGQSAWSVMRVRVIVDIESPLQRGV-TMRNKEGKVIWCPIQYEKLPDFCFNYGVIGHSFRAC-KQEVLKEDGQ-
        VP  C S   AR+WG  +G +++ D +G +     R RVI+D+  P  RG+    + +   +  PIQYE LP+FCF   +IGH  R C ++E L   G+ 
Subjt:  VPFNCLSVGMARIWGGEVGEMVEVDWDGQSAWSVMRVRVIVDIESPLQRGV-TMRNKEGKVIWCPIQYEKLPDFCFNYGVIGHSFRAC-KQEVLKEDGQ-

Query:  --LQYGDWLRAVLIRKWSFKGAEER
           +YGDWL+A  +++W  +  E +
Subjt:  --LQYGDWLRAVLIRKWSFKGAEER

A0A5C7IP22 Uncharacterized protein1.9e-3632.23Show/hide
Query:  DGGFLSGVTAGFFANEKEGKVIAASDPIILLAAENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAGSNIFYIKFKSQSEKERVIGSGPWIF
        D   +S + A      K+ K+ +    +     + ++LC V K+L  K+ N +AF +VI  +W+ +     E    N+F   F++Q ++ RV+  GPW F
Subjt:  DGGFLSGVTAGFFANEKEGKVIAASDPIILLAAENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAGSNIFYIKFKSQSEKERVIGSGPWIF

Query:  DKAMIVMVSPSENDQVVDLAFTKASFWIQIHNVPFNCLSVGMARIWGGEVGEMVEVD--WDGQSAWSVMRVRVIVDIESPLQRGVTMRNKEGKVIWCPIQ
        D  ++V+  PS    +  LAFT+ +FWIQI N P  C++  M +  G  +GE+V++D    G+     MR+RVI+D+  PL+R + +  ++G+     ++
Subjt:  DKAMIVMVSPSENDQVVDLAFTKASFWIQIHNVPFNCLSVGMARIWGGEVGEMVEVD--WDGQSAWSVMRVRVIVDIESPLQRGVTMRNKEGKVIWCPIQ

Query:  YEKLPDFCFNYGVIGHSFRACKQEVLKEDGQ------LQYGDWLRAV-LIRKWSFKGAEEREVRRDEERLGGG
        YEKLP+FCF+YG IGHS+  C   ++  DG+        +G WLRA   +  W+ +     E    +  LG G
Subjt:  YEKLPDFCFNYGVIGHSFRACKQEVLKEDGQ------LQYGDWLRAV-LIRKWSFKGAEEREVRRDEERLGGG

A0A6J1D765 uncharacterized protein LOC1110179022.2e-6146.49Show/hide
Query:  NEKEGKVIAASDPIILLAAENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAGSNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSEND
        +E E   I    PI  L A+N++LC VAK+   K  + +A  SV+KSVW+VH  TR E  G NI+ I FKS SEK RV+ SGPW F+K+++V+ SP+  +
Subjt:  NEKEGKVIAASDPIILLAAENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAGSNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSEND

Query:  QVVDLAFTKASFWIQIHNVPFNCLSVGMARIWGGEVGEMVEVDWDGQSAWS--VMRVRVIVDIESPLQRGVTMRNKEGKVIWCPIQYEKLPDFCFNYGVI
        Q +D+ F   +FWIQIHN+PF C+S  MA I G ++G++ E++ DG   W+   +RVRV +D+  PL+RG+ ++N +GK IWCP++YEKLPDFC+  G I
Subjt:  QVVDLAFTKASFWIQIHNVPFNCLSVGMARIWGGEVGEMVEVDWDGQSAWS--VMRVRVIVDIESPLQRGVTMRNKEGKVIWCPIQYEKLPDFCFNYGVI

Query:  GHSFRACKQ--EVLKEDGQLQYGDWLRAVLIRKWSFKGAEEREVRRDEERLGGGMKREKVHSAEGGGKGKG
        GHS R C+Q  +V+  +   QYGDWLRA L++K S    EE EV     R G G      H   GG  G+G
Subjt:  GHSFRACKQ--EVLKEDGQLQYGDWLRAVLIRKWSFKGAEEREVRRDEERLGGGMKREKVHSAEGGGKGKG

A0A6J1DP89 uncharacterized protein LOC1110229325.3e-3943.85Show/hide
Query:  EKEGKVIAASDPIILLAAENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAGSNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQ
        EKE  +I  S+   L+  EN+Q  AV K+   K  +V+AF SV+KS+WKVH+ T  E+AG N++ I FKS +EK RV+ SGPW F+ +++V+ SP+  DQ
Subjt:  EKEGKVIAASDPIILLAAENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAGSNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQ

Query:  VVDLAFTKASFWIQIHNVPFNCLSVGMARIWGGEVGEMVEVDWDGQSAWS--VMRVRVIVDIESPLQRGVTMRNKEGKVIWCPIQYE
          D+ F   + WIQIH +PF C+   MA+  G  +GE+ E+D +G   W+   +RVRV +DI  P +RG+ +R  + K  WCP++YE
Subjt:  VVDLAFTKASFWIQIHNVPFNCLSVGMARIWGGEVGEMVEVDWDGQSAWS--VMRVRVIVDIESPLQRGVTMRNKEGKVIWCPIQYE

A0A6J1DVS4 uncharacterized protein LOC1110235551.3e-4544.17Show/hide
Query:  EKEGKVIAASDPIILLAAENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAGSNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQ
        E++  VI    PI  L  +NIQLCAV K+   K   V+AFASV+K VWK+H  TR E+AG NI+ I FK+ +EK RV   GPW FDK+++++V  +  ++
Subjt:  EKEGKVIAASDPIILLAAENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAGSNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQ

Query:  VVDLAFTKASFWIQIHNVPFNCLSVGMARIWGGEVGEMVEVDWDGQSAWSVMR----VRVIVDIESPLQRGVTMRNKEGKVIWCPIQYEKLPDFCFNYGV
         +D+  +  +FW+QIH + F C++  MA+  G  +GE+ EV  DG S++  +R    VRV +++  PL+RG+ ++  +GK IWCP++YE+LPDFC+  G 
Subjt:  VVDLAFTKASFWIQIHNVPFNCLSVGMARIWGGEVGEMVEVDWDGQSAWSVMR----VRVIVDIESPLQRGVTMRNKEGKVIWCPIQYEKLPDFCFNYGV

Query:  IGHSFR
        +GHS R
Subjt:  IGHSFR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G31430.1 unknown protein7.9e-1127.22Show/hide
Query:  FYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQVVDLAFTKASFWIQIHNVPFNCLSVGMARIWGGEVGEMVEVDWDGQSAWSVMRVRVIV--DIE
        F+  F  +   E V+  GPW F+  MI++      +  + L F    FW+QI  +PF  L+ G+    G  +G++++ D++ +    +   RV++  DI 
Subjt:  FYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQVVDLAFTKASFWIQIHNVPFNCLSVGMARIWGGEVGEMVEVDWDGQSAWSVMRVRVIV--DIE

Query:  SPLQRGVTMRNKEGKVIWCPIQYEKLPDFCFNYGVIGHSFRACKQEVLKEDGQLQYGD
         PL+     +   G       +YE+L  FC   G++ H F AC   +++  G+ Q  D
Subjt:  SPLQRGVTMRNKEGKVIWCPIQYEKLPDFCFNYGVIGHSFRACKQEVLKEDGQLQYGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCTTCGTGGAGTTCGGCTCCCATGGTTTTCTCTCTACTTGAGAGACGGTGGGTTTTTGAGTGGTGTGACGGCGGGATTTTTCGCTAACGAAAAAGAAGGAAAGGT
CATTGCGGCCAGCGATCCAATAATTTTACTGGCGGCTGAAAATATCCAATTGTGTGCTGTGGCAAAAGTGTTGAATGATAAATATACCAATGTGGATGCCTTTGCTTCTG
TGATAAAGTCGGTTTGGAAGGTTCATCAGGGTACAAGGACTGAGTCAGCTGGTAGCAATATTTTCTATATAAAATTCAAATCTCAAAGCGAGAAGGAGAGAGTGATAGGC
TCGGGTCCATGGATTTTCGATAAGGCTATGATTGTTATGGTTTCTCCCAGTGAGAATGATCAAGTTGTGGATTTGGCTTTCACTAAGGCAAGCTTTTGGATTCAGATACA
TAATGTTCCTTTCAATTGCTTGTCTGTAGGGATGGCTAGAATCTGGGGGGGTGAGGTGGGAGAAATGGTAGAAGTTGACTGGGATGGTCAAAGTGCGTGGTCGGTTATGA
GAGTGAGAGTGATTGTGGATATCGAGAGTCCATTGCAAAGAGGGGTGACAATGAGGAATAAGGAGGGGAAAGTGATTTGGTGCCCAATCCAATATGAGAAACTGCCTGAT
TTCTGTTTTAATTATGGAGTAATTGGCCATTCTTTTCGGGCATGTAAACAAGAGGTTTTGAAGGAGGATGGGCAGCTCCAGTATGGAGATTGGTTGAGAGCGGTGCTAAT
AAGGAAGTGGAGTTTTAAGGGGGCTGAGGAGCGGGAGGTTAGGAGGGATGAAGAGAGGTTAGGGGGAGGGATGAAAAGGGAGAAGGTACATTCAGCGGAGGGAGGTGGGA
AAGGGAAAGGGGTTCTAAAGGAGGAGAAATTGGAGGAGATGGAGGTGGAGGTCGAAAGGGAAGGGGTTGGGGTGGGTTCAGCGGGGATAAAAATAGAGGAAGGGGGGAAA
GGGAGTGAAGAGGTCATGGAAGAGAATGACCCGGCAGAGGATGGAGGTTGGAGGGGATATGGCATGGGATGGGAAAGGGAAGAAGAGATCTTTAGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCTTCGTGGAGTTCGGCTCCCATGGTTTTCTCTCTACTTGAGAGACGGTGGGTTTTTGAGTGGTGTGACGGCGGGATTTTTCGCTAACGAAAAAGAAGGAAAGGT
CATTGCGGCCAGCGATCCAATAATTTTACTGGCGGCTGAAAATATCCAATTGTGTGCTGTGGCAAAAGTGTTGAATGATAAATATACCAATGTGGATGCCTTTGCTTCTG
TGATAAAGTCGGTTTGGAAGGTTCATCAGGGTACAAGGACTGAGTCAGCTGGTAGCAATATTTTCTATATAAAATTCAAATCTCAAAGCGAGAAGGAGAGAGTGATAGGC
TCGGGTCCATGGATTTTCGATAAGGCTATGATTGTTATGGTTTCTCCCAGTGAGAATGATCAAGTTGTGGATTTGGCTTTCACTAAGGCAAGCTTTTGGATTCAGATACA
TAATGTTCCTTTCAATTGCTTGTCTGTAGGGATGGCTAGAATCTGGGGGGGTGAGGTGGGAGAAATGGTAGAAGTTGACTGGGATGGTCAAAGTGCGTGGTCGGTTATGA
GAGTGAGAGTGATTGTGGATATCGAGAGTCCATTGCAAAGAGGGGTGACAATGAGGAATAAGGAGGGGAAAGTGATTTGGTGCCCAATCCAATATGAGAAACTGCCTGAT
TTCTGTTTTAATTATGGAGTAATTGGCCATTCTTTTCGGGCATGTAAACAAGAGGTTTTGAAGGAGGATGGGCAGCTCCAGTATGGAGATTGGTTGAGAGCGGTGCTAAT
AAGGAAGTGGAGTTTTAAGGGGGCTGAGGAGCGGGAGGTTAGGAGGGATGAAGAGAGGTTAGGGGGAGGGATGAAAAGGGAGAAGGTACATTCAGCGGAGGGAGGTGGGA
AAGGGAAAGGGGTTCTAAAGGAGGAGAAATTGGAGGAGATGGAGGTGGAGGTCGAAAGGGAAGGGGTTGGGGTGGGTTCAGCGGGGATAAAAATAGAGGAAGGGGGGAAA
GGGAGTGAAGAGGTCATGGAAGAGAATGACCCGGCAGAGGATGGAGGTTGGAGGGGATATGGCATGGGATGGGAAAGGGAAGAAGAGATCTTTAGAGGATGA
Protein sequenceShow/hide protein sequence
MFLRGVRLPWFSLYLRDGGFLSGVTAGFFANEKEGKVIAASDPIILLAAENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAGSNIFYIKFKSQSEKERVIG
SGPWIFDKAMIVMVSPSENDQVVDLAFTKASFWIQIHNVPFNCLSVGMARIWGGEVGEMVEVDWDGQSAWSVMRVRVIVDIESPLQRGVTMRNKEGKVIWCPIQYEKLPD
FCFNYGVIGHSFRACKQEVLKEDGQLQYGDWLRAVLIRKWSFKGAEEREVRRDEERLGGGMKREKVHSAEGGGKGKGVLKEEKLEEMEVEVEREGVGVGSAGIKIEEGGK
GSEEVMEENDPAEDGGWRGYGMGWEREEEIFRG