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Lag0028559 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028559
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr8:24921632..24922152
RNA-Seq ExpressionLag0028559
SyntenyLag0028559
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3467449.1 reverse transcriptase [Gossypium australe]5.6e-1540.83Show/hide
Query:  MQEYRDALDECGLKDMSFCGSSYTWTRIKDRQVFIQERLDRGLCNEEFTIMFPFATVYHLEYHLSDHCPIMLDLRNMLHRGRRKQPYVFRFEE--MLWGC
        M E+R ALDEC L D+ F G  YTW R K     I+ERLDRG+   ++  +FP   + HL +  SDHCPI+LD  +    G   Q   FRFE    L   
Subjt:  MQEYRDALDECGLKDMSFCGSSYTWTRIKDRQVFIQERLDRGLCNEEFTIMFPFATVYHLEYHLSDHCPIMLDLRNMLHRGRRKQPYVFRFEE--MLWGC

Query:  LAELAK-WGRGRCGATRIRL
        L  L K W    CG   +++
Subjt:  LAELAK-WGRGRCGATRIRL

RYR04437.1 hypothetical protein Ahy_B06g084164 [Arachis hypogaea]2.1e-1436.29Show/hide
Query:  MQEYRDALDECGLKDMSFCGSSYTWTRIKDRQVFIQERLDRGLCNEEFTIMFPFATVYHLEYHLSDHCPIMLDLRNMLHRGRRKQPYVFRFEEM------
        M+ +++AL    L D+ F G S+TWT  +  ++ IQERLDR +   ++   FP   V HL+ + SDHCP+++D+    ++ RR +P +FRFEEM      
Subjt:  MQEYRDALDECGLKDMSFCGSSYTWTRIKDRQVFIQERLDRGLCNEEFTIMFPFATVYHLEYHLSDHCPIMLDLRNMLHRGRRKQPYVFRFEEM------

Query:  -------LWGCLAELAKWGRGRCG
                W   AE  KW    CG
Subjt:  -------LWGCLAELAKWGRGRCG

RYR06732.1 hypothetical protein Ahy_B05g074030 [Arachis hypogaea]3.6e-1435.48Show/hide
Query:  MQEYRDALDECGLKDMSFCGSSYTWTRIKDRQVFIQERLDRGLCNEEFTIMFPFATVYHLEYHLSDHCPIMLDLRNMLHRGRRKQPYVFRFEEM------
        M+ +++ L    L D+ F G S+TWT  +  ++ IQERLDR +   ++   FP   V HL+ + SDHCP+++D+    ++ RR +P +FRFEEM      
Subjt:  MQEYRDALDECGLKDMSFCGSSYTWTRIKDRQVFIQERLDRGLCNEEFTIMFPFATVYHLEYHLSDHCPIMLDLRNMLHRGRRKQPYVFRFEEM------

Query:  -------LWGCLAELAKWGRGRCG
                W   AE  KW    CG
Subjt:  -------LWGCLAELAKWGRGRCG

XP_023878182.1 uncharacterized protein LOC111990628 [Quercus suber]2.1e-1446.81Show/hide
Query:  MQEYRDALDECGLKDMSFCGSSYTWTRIKDRQVFIQERLDRGLCNEEFTIMFPFATVYHLEYHLSDHCPIMLDLRNMLHRGRRKQPYVFRFEEM
        MQ +RD LDECG  D+ F GS +TW++       I ERLDRG+ N  + + FP  TVYHL  + SDH P+ ++L  ++   R+K   VFRFEEM
Subjt:  MQEYRDALDECGLKDMSFCGSSYTWTRIKDRQVFIQERLDRGLCNEEFTIMFPFATVYHLEYHLSDHCPIMLDLRNMLHRGRRKQPYVFRFEEM

XP_030936104.1 uncharacterized protein LOC115961231 [Quercus lobata]7.2e-1546.81Show/hide
Query:  MQEYRDALDECGLKDMSFCGSSYTWTRIKDRQVFIQERLDRGLCNEEFTIMFPFATVYHLEYHLSDHCPIMLDLRNMLHRGRRKQPYVFRFEEM
        MQ +RD +DECGL DM F G SYTW++  D    I ERLDRGL    + + FP   ++HL  + SDH P+ ++L  +    +RK   VFRFEEM
Subjt:  MQEYRDALDECGLKDMSFCGSSYTWTRIKDRQVFIQERLDRGLCNEEFTIMFPFATVYHLEYHLSDHCPIMLDLRNMLHRGRRKQPYVFRFEEM

TrEMBL top hitse value%identityAlignment
A0A2N9IMU2 Reverse transcriptase domain-containing protein5.1e-1443.75Show/hide
Query:  MQEYRDALDECGLKDMSFCGSSYTWTRIKDRQVFIQERLDRGLCNEEFTIMFPFATVYHLEYHLSDHCPIMLDL--RNMLHRGRRKQPYVFRFEEM
        MQ++RDA+D CG  D+ F G  +TW   +     I ERLDRGL   E+  MFP A+++H++   SDHCP+ L+L   N  H  +R+    FRFEE+
Subjt:  MQEYRDALDECGLKDMSFCGSSYTWTRIKDRQVFIQERLDRGLCNEEFTIMFPFATVYHLEYHLSDHCPIMLDL--RNMLHRGRRKQPYVFRFEEM

A0A444YR87 Reverse transcriptase domain-containing protein1.0e-1436.29Show/hide
Query:  MQEYRDALDECGLKDMSFCGSSYTWTRIKDRQVFIQERLDRGLCNEEFTIMFPFATVYHLEYHLSDHCPIMLDLRNMLHRGRRKQPYVFRFEEM------
        M+ +++AL    L D+ F G S+TWT  +  ++ IQERLDR +   ++   FP   V HL+ + SDHCP+++D+    ++ RR +P +FRFEEM      
Subjt:  MQEYRDALDECGLKDMSFCGSSYTWTRIKDRQVFIQERLDRGLCNEEFTIMFPFATVYHLEYHLSDHCPIMLDLRNMLHRGRRKQPYVFRFEEM------

Query:  -------LWGCLAELAKWGRGRCG
                W   AE  KW    CG
Subjt:  -------LWGCLAELAKWGRGRCG

A0A444YXR6 Uncharacterized protein1.7e-1435.48Show/hide
Query:  MQEYRDALDECGLKDMSFCGSSYTWTRIKDRQVFIQERLDRGLCNEEFTIMFPFATVYHLEYHLSDHCPIMLDLRNMLHRGRRKQPYVFRFEEM------
        M+ +++ L    L D+ F G S+TWT  +  ++ IQERLDR +   ++   FP   V HL+ + SDHCP+++D+    ++ RR +P +FRFEEM      
Subjt:  MQEYRDALDECGLKDMSFCGSSYTWTRIKDRQVFIQERLDRGLCNEEFTIMFPFATVYHLEYHLSDHCPIMLDLRNMLHRGRRKQPYVFRFEEM------

Query:  -------LWGCLAELAKWGRGRCG
                W   AE  KW    CG
Subjt:  -------LWGCLAELAKWGRGRCG

A0A5B6VE87 Reverse transcriptase2.7e-1540.83Show/hide
Query:  MQEYRDALDECGLKDMSFCGSSYTWTRIKDRQVFIQERLDRGLCNEEFTIMFPFATVYHLEYHLSDHCPIMLDLRNMLHRGRRKQPYVFRFEE--MLWGC
        M E+R ALDEC L D+ F G  YTW R K     I+ERLDRG+   ++  +FP   + HL +  SDHCPI+LD  +    G   Q   FRFE    L   
Subjt:  MQEYRDALDECGLKDMSFCGSSYTWTRIKDRQVFIQERLDRGLCNEEFTIMFPFATVYHLEYHLSDHCPIMLDLRNMLHRGRRKQPYVFRFEE--MLWGC

Query:  LAELAK-WGRGRCGATRIRL
        L  L K W    CG   +++
Subjt:  LAELAK-WGRGRCGATRIRL

A0A803LPN5 Uncharacterized protein5.1e-1445.65Show/hide
Query:  MQEYRDALDECGLKDMSFCGSSYTWTRIKDRQVFIQERLDRGLCNEEFTIMFPFATVYHLEYHLSDHCPIMLDLRNMLHRGRRKQPYVFRFE
        MQ +RDA+++C L+DM F G +YTW R +  +  I+ERLDR L +E +  MFP A V H+    SDH PIM+    +  RG++ +P  FRFE
Subjt:  MQEYRDALDECGLKDMSFCGSSYTWTRIKDRQVFIQERLDRGLCNEEFTIMFPFATVYHLEYHLSDHCPIMLDLRNMLHRGRRKQPYVFRFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein1.9e-0528.92Show/hide
Query:  MQEYRDALDECGLKDMSFCGSSYTWTRIKDRQVFIQERLDRGLCNEEFTIMFPFATVYHLEYHLSDHCPIMLDLRNMLHRGRR
        ++E+++ L +  L D+   G  YTW+  +D    I+ +LDR + N ++   FP A        +SDH P ++ L N+  R ++
Subjt:  MQEYRDALDECGLKDMSFCGSSYTWTRIKDRQVFIQERLDRGLCNEEFTIMFPFATVYHLEYHLSDHCPIMLDLRNMLHRGRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGAGTACAGGGATGCTCTAGATGAGTGTGGCCTGAAAGATATGAGTTTTTGCGGTTCCTCTTACACTTGGACAAGGATTAAAGACAGACAGGTGTTCATCCAAGA
GAGACTGGATAGGGGGTTGTGCAATGAGGAGTTTACTATTATGTTCCCTTTTGCTACAGTGTACCACTTGGAGTACCATTTGTCTGACCATTGCCCTATTATGCTGGATT
TGAGGAATATGCTCCATAGAGGAAGGAGAAAGCAGCCATATGTTTTCAGATTTGAAGAGATGCTCTGGGGGTGCTTGGCTGAGCTTGCCAAGTGGGGGAGAGGAAGGTGT
GGGGCTACTCGCATAAGATTGCTAAGGTTCGACACTTTCAGAATGAGTCGATATTGGAGAGAGGGGATGTGCATGGGGCGAGGTCTCAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGAGTACAGGGATGCTCTAGATGAGTGTGGCCTGAAAGATATGAGTTTTTGCGGTTCCTCTTACACTTGGACAAGGATTAAAGACAGACAGGTGTTCATCCAAGA
GAGACTGGATAGGGGGTTGTGCAATGAGGAGTTTACTATTATGTTCCCTTTTGCTACAGTGTACCACTTGGAGTACCATTTGTCTGACCATTGCCCTATTATGCTGGATT
TGAGGAATATGCTCCATAGAGGAAGGAGAAAGCAGCCATATGTTTTCAGATTTGAAGAGATGCTCTGGGGGTGCTTGGCTGAGCTTGCCAAGTGGGGGAGAGGAAGGTGT
GGGGCTACTCGCATAAGATTGCTAAGGTTCGACACTTTCAGAATGAGTCGATATTGGAGAGAGGGGATGTGCATGGGGCGAGGTCTCAACTAG
Protein sequenceShow/hide protein sequence
MQEYRDALDECGLKDMSFCGSSYTWTRIKDRQVFIQERLDRGLCNEEFTIMFPFATVYHLEYHLSDHCPIMLDLRNMLHRGRRKQPYVFRFEEMLWGCLAELAKWGRGRC
GATRIRLLRFDTFRMSRYWREGMCMGRGLN