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Lag0028565 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028565
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr8:25062795..25063932
RNA-Seq ExpressionLag0028565
SyntenyLag0028565
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158489.1 uncharacterized protein LOC111024968 [Momordica charantia]4.8e-0435.42Show/hide
Query:  GCIRDASGAGIHAAMVNRFSILYSPFIAKAIAVREGLQLVQRLNLGHVLLESDYSNLVSSIHGSLVLQSEDGTQVEDIRGLILQFRQVQFQHIGRE
        G +     A I  AMV+ F ++ +P +AK +A+REGL L  RL +  V++E+D    ++ I      + E  + VEDIR     F+++ FQH+ RE
Subjt:  GCIRDASGAGIHAAMVNRFSILYSPFIAKAIAVREGLQLVQRLNLGHVLLESDYSNLVSSIHGSLVLQSEDGTQVEDIRGLILQFRQVQFQHIGRE
TrEMBL top hitse value%identityAlignment
A0A6J1DZK3 uncharacterized protein LOC1110249682.3e-0435.42Show/hide
Query:  GCIRDASGAGIHAAMVNRFSILYSPFIAKAIAVREGLQLVQRLNLGHVLLESDYSNLVSSIHGSLVLQSEDGTQVEDIRGLILQFRQVQFQHIGRE
        G +     A I  AMV+ F ++ +P +AK +A+REGL L  RL +  V++E+D    ++ I      + E  + VEDIR     F+++ FQH+ RE
Subjt:  GCIRDASGAGIHAAMVNRFSILYSPFIAKAIAVREGLQLVQRLNLGHVLLESDYSNLVSSIHGSLVLQSEDGTQVEDIRGLILQFRQVQFQHIGRE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGGCCAATGCCACCTCTATCCACATCTATATCTCTGGTTAGTGAATTTATTTGTCCATCTAGTACTTGGGATGTTGAGAAGCTAGCAGTTTTATTAGCTCCAGA
GGATATGTGGATAGTGCTTGGTATACCTCTCGATCGATCAGGGACCCGAGGATGGATGGCTTTGGCATTATTGGAAGCCGGGTTCGAAAACGACGGATCATGCCTTAGTT
ACTTTGCAAACGCTCAAGGACCTATTGGAAGGGAATTTGGGTCGGTCTCTGCCACTGTGTTGGGCAGTCAAGCAGTTTGCAACAAGTGTGGGTGTATTCGTGATGCCTCG
GGGGCCGGCATTCATGCAGCAATGGTGAATCGGTTCTCAATTTTGTATTCTCCTTTCATTGCTAAGGCCATTGCTGTGCGTGAGGGATTACAGTTAGTGCAACGGTTGAA
TCTAGGACATGTCCTTTTGGAATCAGATTATTCTAATTTGGTTTCTTCGATTCACGGCTCTCTGGTTTTGCAGAGTGAAGATGGTACACAGGTGGAGGATATCCGAGGTT
TGATCTTGCAGTTCCGCCAAGTCCAGTTTCAGCATATTGGGCGAGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGGGCCAATGCCACCTCTATCCACATCTATATCTCTGGTTAGTGAATTTATTTGTCCATCTAGTACTTGGGATGTTGAGAAGCTAGCAGTTTTATTAGCTCCAGA
GGATATGTGGATAGTGCTTGGTATACCTCTCGATCGATCAGGGACCCGAGGATGGATGGCTTTGGCATTATTGGAAGCCGGGTTCGAAAACGACGGATCATGCCTTAGTT
ACTTTGCAAACGCTCAAGGACCTATTGGAAGGGAATTTGGGTCGGTCTCTGCCACTGTGTTGGGCAGTCAAGCAGTTTGCAACAAGTGTGGGTGTATTCGTGATGCCTCG
GGGGCCGGCATTCATGCAGCAATGGTGAATCGGTTCTCAATTTTGTATTCTCCTTTCATTGCTAAGGCCATTGCTGTGCGTGAGGGATTACAGTTAGTGCAACGGTTGAA
TCTAGGACATGTCCTTTTGGAATCAGATTATTCTAATTTGGTTTCTTCGATTCACGGCTCTCTGGTTTTGCAGAGTGAAGATGGTACACAGGTGGAGGATATCCGAGGTT
TGATCTTGCAGTTCCGCCAAGTCCAGTTTCAGCATATTGGGCGAGAGTAG
Protein sequenceShow/hide protein sequence
MLGPMPPLSTSISLVSEFICPSSTWDVEKLAVLLAPEDMWIVLGIPLDRSGTRGWMALALLEAGFENDGSCLSYFANAQGPIGREFGSVSATVLGSQAVCNKCGCIRDAS
GAGIHAAMVNRFSILYSPFIAKAIAVREGLQLVQRLNLGHVLLESDYSNLVSSIHGSLVLQSEDGTQVEDIRGLILQFRQVQFQHIGRE