; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028566 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028566
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr8:25104121..25104585
RNA-Seq ExpressionLag0028566
SyntenyLag0028566
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049700.1 T4.5 [Cucumis melo var. makuwa]4.7e-1860.44Show/hide
Query:  SILKAHKLFGFIDGSTNCLPKTVPSSTTFSSTLTETATKAPPAPVSSQINPLYEEWVAKDQALMTLINATLSPTALAYVVGCTSSKQAWEV
        +ILKAHKL+GFIDG+  C P+T  SS+T         +  PP     Q NP YE+W+AKDQALMT+INATLSP ALAYVVG TSSKQ W+V
Subjt:  SILKAHKLFGFIDGSTNCLPKTVPSSTTFSSTLTETATKAPPAPVSSQINPLYEEWVAKDQALMTLINATLSPTALAYVVGCTSSKQAWEV

KAE8645659.1 hypothetical protein Csa_020439 [Cucumis sativus]1.2e-1861.54Show/hide
Query:  SILKAHKLFGFIDGSTNCLPKTVPSSTTFSSTLTETATKAPPAPVSSQINPLYEEWVAKDQALMTLINATLSPTALAYVVGCTSSKQAWEV
        +ILKAHKLFGF+DG+  C P+T PS+T          +  PP     Q NPLYE+W+AKDQALMT+INATLSP ALAYVVG TSSKQ W+V
Subjt:  SILKAHKLFGFIDGSTNCLPKTVPSSTTFSSTLTETATKAPPAPVSSQINPLYEEWVAKDQALMTLINATLSPTALAYVVGCTSSKQAWEV

XP_008448007.1 PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo]4.7e-1860.44Show/hide
Query:  SILKAHKLFGFIDGSTNCLPKTVPSSTTFSSTLTETATKAPPAPVSSQINPLYEEWVAKDQALMTLINATLSPTALAYVVGCTSSKQAWEV
        +ILKAHKL+GFIDG+  C P+T  SS+T         +  PP     Q NP YE+W+AKDQALMT+INATLSP ALAYVVG TSSKQ W+V
Subjt:  SILKAHKLFGFIDGSTNCLPKTVPSSTTFSSTLTETATKAPPAPVSSQINPLYEEWVAKDQALMTLINATLSPTALAYVVGCTSSKQAWEV

XP_008448008.1 PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo]4.7e-1860.44Show/hide
Query:  SILKAHKLFGFIDGSTNCLPKTVPSSTTFSSTLTETATKAPPAPVSSQINPLYEEWVAKDQALMTLINATLSPTALAYVVGCTSSKQAWEV
        +ILKAHKL+GFIDG+  C P+T  SS+T         +  PP     Q NP YE+W+AKDQALMT+INATLSP ALAYVVG TSSKQ W+V
Subjt:  SILKAHKLFGFIDGSTNCLPKTVPSSTTFSSTLTETATKAPPAPVSSQINPLYEEWVAKDQALMTLINATLSPTALAYVVGCTSSKQAWEV

XP_011658579.1 uncharacterized protein LOC105436058 [Cucumis sativus]1.2e-1861.54Show/hide
Query:  SILKAHKLFGFIDGSTNCLPKTVPSSTTFSSTLTETATKAPPAPVSSQINPLYEEWVAKDQALMTLINATLSPTALAYVVGCTSSKQAWEV
        +ILKAHKLFGF+DG+  C P+T PS+T          +  PP     Q NPLYE+W+AKDQALMT+INATLSP ALAYVVG TSSKQ W+V
Subjt:  SILKAHKLFGFIDGSTNCLPKTVPSSTTFSSTLTETATKAPPAPVSSQINPLYEEWVAKDQALMTLINATLSPTALAYVVGCTSSKQAWEV

TrEMBL top hitse value%identityAlignment
A0A1S3BI58 uncharacterized protein LOC103490319 isoform X22.3e-1860.44Show/hide
Query:  SILKAHKLFGFIDGSTNCLPKTVPSSTTFSSTLTETATKAPPAPVSSQINPLYEEWVAKDQALMTLINATLSPTALAYVVGCTSSKQAWEV
        +ILKAHKL+GFIDG+  C P+T  SS+T         +  PP     Q NP YE+W+AKDQALMT+INATLSP ALAYVVG TSSKQ W+V
Subjt:  SILKAHKLFGFIDGSTNCLPKTVPSSTTFSSTLTETATKAPPAPVSSQINPLYEEWVAKDQALMTLINATLSPTALAYVVGCTSSKQAWEV

A0A1S3BIR3 uncharacterized protein LOC103490319 isoform X32.3e-1860.44Show/hide
Query:  SILKAHKLFGFIDGSTNCLPKTVPSSTTFSSTLTETATKAPPAPVSSQINPLYEEWVAKDQALMTLINATLSPTALAYVVGCTSSKQAWEV
        +ILKAHKL+GFIDG+  C P+T  SS+T         +  PP     Q NP YE+W+AKDQALMT+INATLSP ALAYVVG TSSKQ W+V
Subjt:  SILKAHKLFGFIDGSTNCLPKTVPSSTTFSSTLTETATKAPPAPVSSQINPLYEEWVAKDQALMTLINATLSPTALAYVVGCTSSKQAWEV

A0A1S4DWT9 uncharacterized protein LOC103490319 isoform X12.3e-1860.44Show/hide
Query:  SILKAHKLFGFIDGSTNCLPKTVPSSTTFSSTLTETATKAPPAPVSSQINPLYEEWVAKDQALMTLINATLSPTALAYVVGCTSSKQAWEV
        +ILKAHKL+GFIDG+  C P+T  SS+T         +  PP     Q NP YE+W+AKDQALMT+INATLSP ALAYVVG TSSKQ W+V
Subjt:  SILKAHKLFGFIDGSTNCLPKTVPSSTTFSSTLTETATKAPPAPVSSQINPLYEEWVAKDQALMTLINATLSPTALAYVVGCTSSKQAWEV

A0A5D3CLI6 T4.52.3e-1860.44Show/hide
Query:  SILKAHKLFGFIDGSTNCLPKTVPSSTTFSSTLTETATKAPPAPVSSQINPLYEEWVAKDQALMTLINATLSPTALAYVVGCTSSKQAWEV
        +ILKAHKL+GFIDG+  C P+T  SS+T         +  PP     Q NP YE+W+AKDQALMT+INATLSP ALAYVVG TSSKQ W+V
Subjt:  SILKAHKLFGFIDGSTNCLPKTVPSSTTFSSTLTETATKAPPAPVSSQINPLYEEWVAKDQALMTLINATLSPTALAYVVGCTSSKQAWEV

A0A5D3D3T6 Retrotran_gag_3 domain-containing protein4.0e-1556.18Show/hide
Query:  ILKAHKLFGFIDGSTNCLPKTVPSSTTFSSTLTETATKAPPAPVSSQINPLYEEWVAKDQALMTLINATLSPTALAYVVGCTSSKQAWE
        +LKAHKL+GFID S    PKT+ + TT SS+ T   T +    +S   NP YE+W AKDQA M LINATLS  AL YVVGC SS Q W+
Subjt:  ILKAHKLFGFIDGSTNCLPKTVPSSTTFSSTLTETATKAPPAPVSSQINPLYEEWVAKDQALMTLINATLSPTALAYVVGCTSSKQAWE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATTTTAAAGGCTCACAAGTTGTTTGGATTTATCGATGGCTCCACTAATTGCCTTCCAAAGACGGTTCCATCATCCACCACATTTTCCTCTACATTGACGGAGAC
TGCAACTAAAGCACCTCCTGCTCCAGTATCTTCTCAGATTAATCCACTTTATGAGGAGTGGGTTGCCAAAGATCAAGCTCTAATGACACTGATCAATGCCACTTTGTCGC
CGACAGCCTTAGCCTATGTTGTTGGTTGCACATCATCCAAACAAGCTTGGGAGGTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGATTTTAAAGGCTCACAAGTTGTTTGGATTTATCGATGGCTCCACTAATTGCCTTCCAAAGACGGTTCCATCATCCACCACATTTTCCTCTACATTGACGGAGAC
TGCAACTAAAGCACCTCCTGCTCCAGTATCTTCTCAGATTAATCCACTTTATGAGGAGTGGGTTGCCAAAGATCAAGCTCTAATGACACTGATCAATGCCACTTTGTCGC
CGACAGCCTTAGCCTATGTTGTTGGTTGCACATCATCCAAACAAGCTTGGGAGGTTCCTTGA
Protein sequenceShow/hide protein sequence
MSILKAHKLFGFIDGSTNCLPKTVPSSTTFSSTLTETATKAPPAPVSSQINPLYEEWVAKDQALMTLINATLSPTALAYVVGCTSSKQAWEVP