CuGenDBv2

Gene ID	Lag0028571
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Dynamin related protein 5A
Genome location	chr8:25376118..25383432
RNA-Seq Expression	Lag0028571
Synteny	Lag0028571
Gene Ontology terms	GO:0005737 - cytoplasm (cellular component) GO:0005874 - microtubule (cellular component) GO:0016020 - membrane (cellular component) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function) GO:0008017 - microtubule binding (molecular function)
InterPro domains	IPR022812 - Dynamin IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0064325.1 dynamin-related protein 5A [Cucumis melo var. makuwa]

1.7e-19

88.52

Show/hide

Query:  IYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISM
        I KSRTEALLKKTKS VSSKPIVMRAEYAHCPNLTIIDT GFVLKARKGE EN P+EI+SM
Subjt:  IYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISM

TYK20261.1 dynamin-related protein 5A [Cucumis melo var. makuwa]

1.7e-19

88.52

Show/hide

Query:  IYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISM
        I KSRTEALLKKTKS VSSKPIVMRAEYAHCPNLTIIDT GFVLKARKGE EN P+EI+SM
Subjt:  IYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISM

XP_004141359.1 dynamin-related protein 5A isoform X2 [Cucumis sativus]

1.7e-19

88.52

Show/hide

Query:  IYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISM
        I KSRTEALLKKTKS VSSKPIVMRAEYAHCPNLTIIDT GFVLKARKGE EN P+EI+SM
Subjt:  IYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISM

XP_022139769.1 dynamin-related protein 5A [Momordica charantia]

7.8e-20

90.16

Show/hide

Query:  IYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISM
        I KSRTEALLKKTKS VSSKPIVMRAEYAHCPNLTIIDT GFVLKARKGE EN PEEI+SM
Subjt:  IYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISM

XP_038897139.1 dynamin-related protein 5A [Benincasa hispida]

1.0e-19

88.52

Show/hide

Query:  IYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISM
        + KSRTEALLKKTKS VSSKPIVMRAEYAHCPNLTIIDT GFVLKARKGE EN PEEI+SM
Subjt:  IYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L058 Dynamin-type G domain-containing protein

8.4e-20

88.52

Show/hide

Query:  IYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISM
        I KSRTEALLKKTKS VSSKPIVMRAEYAHCPNLTIIDT GFVLKARKGE EN P+EI+SM
Subjt:  IYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISM

A0A1S3BUZ7 dynamin-related protein 5A

8.4e-20

88.52

Show/hide

Query:  IYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISM
        I KSRTEALLKKTKS VSSKPIVMRAEYAHCPNLTIIDT GFVLKARKGE EN P+EI+SM
Subjt:  IYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISM

A0A5A7VEK4 Dynamin-related protein 5A

8.4e-20

88.52

Show/hide

Query:  IYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISM
        I KSRTEALLKKTKS VSSKPIVMRAEYAHCPNLTIIDT GFVLKARKGE EN P+EI+SM
Subjt:  IYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISM

A0A5D3D9M6 Dynamin-related protein 5A

8.4e-20

88.52

Show/hide

Query:  IYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISM
        I KSRTEALLKKTKS VSSKPIVMRAEYAHCPNLTIIDT GFVLKARKGE EN P+EI+SM
Subjt:  IYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISM

A0A6J1CDY0 dynamin-related protein 5A

3.8e-20

90.16

Show/hide

Query:  IYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISM
        I KSRTEALLKKTKS VSSKPIVMRAEYAHCPNLTIIDT GFVLKARKGE EN PEEI+SM
Subjt:  IYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISM

SwissProt top hits

e value

%identity

Alignment

F4HPR5 Dynamin-related protein 5A

6.2e-20

78.69

Show/hide

Query:  IYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISM
        + +SRTEALLKKTK+ VS KPIVMRAEYAHCPNLTIIDT GFVLKA+KGE E  P+EI+SM
Subjt:  IYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISM

Arabidopsis top hits

e value

%identity

Alignment

AT1G53140.1 Dynamin related protein 5A

4.4e-21

78.69

Show/hide

Query:  IYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISM
        + +SRTEALLKKTK+ VS KPIVMRAEYAHCPNLTIIDT GFVLKA+KGE E  P+EI+SM
Subjt:  IYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISM

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTGTGTACTAATTTTTCGAAGGTTGCGGTAGGTAATAACTTTGTAAATAAGTCTGCCAGTTATCGCGCCATTCTCAGCCGTCGTGGGTTTTTCTTCACCGTTCGTGA
CCATCGTGGGTTTTGCTCCATTTACAAGTCTAGAACTGAGGCACTGTTGAAGAAGACCAAAAGTGTTGTTTCTTCCAAGCCTATTGTGATGAGAGCAGAGTATGCACATT
GCCCCAACCTTACCATTATTGATACCCGCGGCTTTGTTCTTAAGGCAAGGAAGGGAGAGCTAGAGAACATACCAGAAGAAATTATTTCAATGGATGTATTCAAAAGGCAC
AGGGTGGTTCTTACAGCAGTGACTTCTATCACATCAGTTGCAACTGCCTGGACTGGATTAGGTCTTGGTGAGTTGCTTAGTGCAGTTCATGCCTTTAATACGTGTGAGAG
ATGTCTGGTTGATCATGGACAGGAATTCTTGACTGTCAAATGGAGTTTGGTATATGGTCTGGATGAGCAATTTTTATATTCCTCCAAGTGCTCTGTTCTGCCCTGTTTAC
GGCTCCCAAAGCTCCCAAATCGAACTCTCCAAAACCTAGCCGAAAATAAGCCTTTATTCTGTTTTTTTCGTCTTAGCGTCGAGACGCTGCCTTCAAAACGCGCGTTTCAT
GAAAGGAAATTATACGTCGTCGAGACGCTAAGGTCGCAACGTCTCGACGCTGTGACCTTTACGCGCCTATCTGATATGGAATGCTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MLCTNFSKVAVGNNFVNKSASYRAILSRRGFFFTVRDHRGFCSIYKSRTEALLKKTKSVVSSKPIVMRAEYAHCPNLTIIDTRGFVLKARKGELENIPEEIISMDVFKRH
RVVLTAVTSITSVATAWTGLGLGELLSAVHAFNTCERCLVDHGQEFLTVKWSLVYGLDEQFLYSSKCSVLPCLRLPKLPNRTLQNLAENKPLFCFFRLSVETLPSKRAFH
ERKLYVVETLRSQRLDAVTFTRLSDMEC

Lag0028571 (gene) of Sponge gourd (AG-4) v1 genome