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Lag0028576 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028576
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:25611973..25612426
RNA-Seq ExpressionLag0028576
SyntenyLag0028576
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAM01179.2 Putative retroelement [Oryza sativa Japonica Group]8.5e-1144.19Show/hide
Query:  IEGGNRWITRKVKEHFSPKDADEILTIPLGDPGTNDEIVWCLDKKGCFTVKSAYQLALKLSHQQEASASDPSKLLSAWNSLWKINS
        I+    W T K+ +HF P DA+ IL I L     +D I W  DK G F+V+SAY LA+ L+H  E S+S  +    AWN+LWK N+
Subjt:  IEGGNRWITRKVKEHFSPKDADEILTIPLGDPGTNDEIVWCLDKKGCFTVKSAYQLALKLSHQQEASASDPSKLLSAWNSLWKINS

ABB46931.2 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]8.5e-1144.19Show/hide
Query:  IEGGNRWITRKVKEHFSPKDADEILTIPLGDPGTNDEIVWCLDKKGCFTVKSAYQLALKLSHQQEASASDPSKLLSAWNSLWKINS
        I+    W T K+ +HF P DA+ IL I L     +D I W  DK G F+V+SAY LA+ L+H  E S+S  +    AWN+LWK N+
Subjt:  IEGGNRWITRKVKEHFSPKDADEILTIPLGDPGTNDEIVWCLDKKGCFTVKSAYQLALKLSHQQEASASDPSKLLSAWNSLWKINS

EEC72938.1 hypothetical protein OsI_06800 [Oryza sativa Indica Group]1.5e-1041.3Show/hide
Query:  IEGGNRWITRKVKEHFSPKDADEILTIPLGDPGTNDEIVWCLDKKGCFTVKSAYQLALKLSHQQEASASDPSKLLSAWNSLWKINSIPRAKI
        I+    W T K+ +HF P DA+ IL I L     +D I W  D+ G F+V+SAY LA+ L+   E S+S  +    AWN+LWK N+  + KI
Subjt:  IEGGNRWITRKVKEHFSPKDADEILTIPLGDPGTNDEIVWCLDKKGCFTVKSAYQLALKLSHQQEASASDPSKLLSAWNSLWKINSIPRAKI

XP_015384077.1 uncharacterized protein LOC107176301 [Citrus sinensis]4.2e-1040.22Show/hide
Query:  IEGGNRWITRKVKEHFSPKDADEILTIPLGDPGTNDEIVWCLDKKGCFTVKSAYQLALKLSHQQEASASDPSKLLSAWNSLWKINSIPRAKI
        I   + W   K+K HF  +D + +L I L      D ++W  DKKG +TVKS YQ+ALKL    +AS+S  S     WN+LW +N + + KI
Subjt:  IEGGNRWITRKVKEHFSPKDADEILTIPLGDPGTNDEIVWCLDKKGCFTVKSAYQLALKLSHQQEASASDPSKLLSAWNSLWKINSIPRAKI

XP_030478322.1 uncharacterized protein LOC115695396 [Cannabis sativa]5.5e-1039.56Show/hide
Query:  IEGGNRWITRKVKEHFSPKDADEILTIPLGDPGTNDEIVWCLDKKGCFTVKSAYQLALKLSHQQEASASDPSKLLSAWNSLWKINSIPRAK
        I   + W TRK+K +F P   D ILT P+ DP ++D ++W     G  TVKSAY LA  L   Q  S+S+P+     W +LW +   P+ K
Subjt:  IEGGNRWITRKVKEHFSPKDADEILTIPLGDPGTNDEIVWCLDKKGCFTVKSAYQLALKLSHQQEASASDPSKLLSAWNSLWKINSIPRAK

TrEMBL top hitse value%identityAlignment
A0A2N9H3I8 Uncharacterized protein9.2e-1133.33Show/hide
Query:  HLVGERAFLKRIPIEGGNRWITRKVKEHFSPKDADEILTIPLGDPGTNDEIVWCLDKKGCFTVKSAYQLALKLSHQQEASASDPSKLLSAWNSLWKINSI
        +++ E A + ++  +    W  + + E F P+D D I+ IPL      D ++W + K+G F+VKSAY L L L + QEA+ S  + + S W+S+W +   
Subjt:  HLVGERAFLKRIPIEGGNRWITRKVKEHFSPKDADEILTIPLGDPGTNDEIVWCLDKKGCFTVKSAYQLALKLSHQQEASASDPSKLLSAWNSLWKINSI

Query:  PRAKI
        P+ K+
Subjt:  PRAKI

A0A7N2M749 Uncharacterized protein4.1e-1144.71Show/hide
Query:  EGGNRWITRKVKEHFSPKDADEILTIPLGDPGTNDEIVWCLDKKGCFTVKSAYQLALKLSHQQ-EASASDPSKLLSAWNSLWKIN
        EG   W T  VK  F P+D + IL+ PL      D +VW  DKKG F+VKS Y+LA +   ++ +AS SDP+KL  AW  +W++N
Subjt:  EGGNRWITRKVKEHFSPKDADEILTIPLGDPGTNDEIVWCLDKKGCFTVKSAYQLALKLSHQQ-EASASDPSKLLSAWNSLWKIN

B8AFP4 Reverse transcriptase domain-containing protein7.0e-1141.3Show/hide
Query:  IEGGNRWITRKVKEHFSPKDADEILTIPLGDPGTNDEIVWCLDKKGCFTVKSAYQLALKLSHQQEASASDPSKLLSAWNSLWKINSIPRAKI
        I+    W T K+ +HF P DA+ IL I L     +D I W  D+ G F+V+SAY LA+ L+   E S+S  +    AWN+LWK N+  + KI
Subjt:  IEGGNRWITRKVKEHFSPKDADEILTIPLGDPGTNDEIVWCLDKKGCFTVKSAYQLALKLSHQQEASASDPSKLLSAWNSLWKINSIPRAKI

Q33AJ4 Retrotransposon protein, putative, unclassified4.1e-1144.19Show/hide
Query:  IEGGNRWITRKVKEHFSPKDADEILTIPLGDPGTNDEIVWCLDKKGCFTVKSAYQLALKLSHQQEASASDPSKLLSAWNSLWKINS
        I+    W T K+ +HF P DA+ IL I L     +D I W  DK G F+V+SAY LA+ L+H  E S+S  +    AWN+LWK N+
Subjt:  IEGGNRWITRKVKEHFSPKDADEILTIPLGDPGTNDEIVWCLDKKGCFTVKSAYQLALKLSHQQEASASDPSKLLSAWNSLWKINS

Q8S5K1 Putative retroelement4.1e-1144.19Show/hide
Query:  IEGGNRWITRKVKEHFSPKDADEILTIPLGDPGTNDEIVWCLDKKGCFTVKSAYQLALKLSHQQEASASDPSKLLSAWNSLWKINS
        I+    W T K+ +HF P DA+ IL I L     +D I W  DK G F+V+SAY LA+ L+H  E S+S  +    AWN+LWK N+
Subjt:  IEGGNRWITRKVKEHFSPKDADEILTIPLGDPGTNDEIVWCLDKKGCFTVKSAYQLALKLSHQQEASASDPSKLLSAWNSLWKINS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGAGCATCTTGTGGGGGAGAGAGCTTTTCTCAAAAGGATACCGATAGAGGGTGGGAATAGGTGGATTACTAGAAAAGTAAAAGAGCATTTTTCCCCTAAAGATGC
TGACGAGATCCTCACTATCCCTCTCGGTGACCCTGGGACTAATGATGAGATTGTGTGGTGTTTGGACAAAAAAGGGTGTTTCACTGTGAAAAGTGCATATCAGCTGGCTT
TAAAACTTTCCCACCAACAAGAAGCTTCAGCCTCGGATCCGTCAAAGCTATTATCTGCCTGGAATAGCTTGTGGAAAATTAACTCTATTCCTAGAGCAAAGATTTGCACT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGAGCATCTTGTGGGGGAGAGAGCTTTTCTCAAAAGGATACCGATAGAGGGTGGGAATAGGTGGATTACTAGAAAAGTAAAAGAGCATTTTTCCCCTAAAGATGC
TGACGAGATCCTCACTATCCCTCTCGGTGACCCTGGGACTAATGATGAGATTGTGTGGTGTTTGGACAAAAAAGGGTGTTTCACTGTGAAAAGTGCATATCAGCTGGCTT
TAAAACTTTCCCACCAACAAGAAGCTTCAGCCTCGGATCCGTCAAAGCTATTATCTGCCTGGAATAGCTTGTGGAAAATTAACTCTATTCCTAGAGCAAAGATTTGCACT
TGA
Protein sequenceShow/hide protein sequence
MGEHLVGERAFLKRIPIEGGNRWITRKVKEHFSPKDADEILTIPLGDPGTNDEIVWCLDKKGCFTVKSAYQLALKLSHQQEASASDPSKLLSAWNSLWKINSIPRAKICT