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Lag0028577 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028577
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:25614881..25615246
RNA-Seq ExpressionLag0028577
SyntenyLag0028577
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_018821989.1 uncharacterized protein LOC108992010 [Juglans regia]1.9e-1946.02Show/hide
Query:  SKNVDKDKVAKCGGILGVSASKELGTYLGMSSLNRRNKNRMFSKVKDSIWKGLQSWKDKLFSAGGKEVLIKTVAQAISVYIMSYFRIPSSICKDINHMCA
        S NV +          GV  S+E   YLG+ S   R+K R FS++K  +W+ LQ WK+K+ SAGGKEVLIK VAQAI  Y MS F++PSS+C ++  M A
Subjt:  SKNVDKDKVAKCGGILGVSASKELGTYLGMSSLNRRNKNRMFSKVKDSIWKGLQSWKDKLFSAGGKEVLIKTVAQAISVYIMSYFRIPSSICKDINHMCA

Query:  NFLWGSVEGKRKM
         F WG    ++K+
Subjt:  NFLWGSVEGKRKM

XP_022145148.1 uncharacterized protein LOC111014662 [Momordica charantia]6.5e-2046.09Show/hide
Query:  MASKNVDKDKVAKCGGILGVSASKELGTYLGMSSLNRRNKNRMFSKVKDSIWKGLQSWKDKLFSAGGKEVLIKTVAQAISVYIMSYFRIPSSICKDINHM
        M S+N  +   A     L V+ +  +G YLG+ S   RNK ++F+ + + +W+ LQ WK+KLFS+GGKEVLIK VAQAI  Y MS FR P ++CK+IN +
Subjt:  MASKNVDKDKVAKCGGILGVSASKELGTYLGMSSLNRRNKNRMFSKVKDSIWKGLQSWKDKLFSAGGKEVLIKTVAQAISVYIMSYFRIPSSICKDINHM

Query:  CANFLWGSVEGKRKM
         A F WGS + ++K+
Subjt:  CANFLWGSVEGKRKM

XP_024155779.1 uncharacterized protein LOC112163738 [Rosa chinensis]8.4e-2044.25Show/hide
Query:  SKNVDKDKVAKCGGILGVSASKELGTYLGMSSLNRRNKNRMFSKVKDSIWKGLQSWKDKLFSAGGKEVLIKTVAQAISVYIMSYFRIPSSICKDINHMCA
        S NV +  + +   ILGV+  KE G YLG+     RNK  +FS +K+ + K L SW+ K+ SAGGKE+L+K VAQ +  Y+M+ + +P S+C D+  +C+
Subjt:  SKNVDKDKVAKCGGILGVSASKELGTYLGMSSLNRRNKNRMFSKVKDSIWKGLQSWKDKLFSAGGKEVLIKTVAQAISVYIMSYFRIPSSICKDINHMCA

Query:  NFLWGSVEGKRKM
         F WGS +GKRK+
Subjt:  NFLWGSVEGKRKM

XP_028082512.1 uncharacterized protein LOC114283840 [Camellia sinensis]8.4e-2047.79Show/hide
Query:  SKNVDKDKVAKCGGILGVSASKELGTYLGMSSLNRRNKNRMFSKVKDSIWKGLQSWKDKLFSAGGKEVLIKTVAQAISVYIMSYFRIPSSICKDINHMCA
        SKNV  D        +GV    E G YLGM  +  R+K  MF+ VKD +WK L  WK+K  SA G+EVLIK+VAQ+I  YIMS F++P  +C +I+ M +
Subjt:  SKNVDKDKVAKCGGILGVSASKELGTYLGMSSLNRRNKNRMFSKVKDSIWKGLQSWKDKLFSAGGKEVLIKTVAQAISVYIMSYFRIPSSICKDINHMCA

Query:  NFLWGSVEGKRKM
        N+ WG  E KRK+
Subjt:  NFLWGSVEGKRKM

XP_030924923.1 uncharacterized protein LOC115951949 [Quercus lobata]2.5e-1941.59Show/hide
Query:  SKNVDKDKVAKCGGILGVSASKELGTYLGMSSLNRRNKNRMFSKVKDSIWKGLQSWKDKLFSAGGKEVLIKTVAQAISVYIMSYFRIPSSICKDINHMCA
        S NV++++  +   +LGV   +   +YLG+ +L  + K + FS +KD +WK +Q WK KL S  GKE+LIK VAQ+I  Y M  F++P  +C+++N MCA
Subjt:  SKNVDKDKVAKCGGILGVSASKELGTYLGMSSLNRRNKNRMFSKVKDSIWKGLQSWKDKLFSAGGKEVLIKTVAQAISVYIMSYFRIPSSICKDINHMCA

Query:  NFLWGSVEGKRKM
         F WG ++ +RK+
Subjt:  NFLWGSVEGKRKM

TrEMBL top hitse value%identityAlignment
A0A2I4ERH4 uncharacterized protein LOC1089920109.1e-2046.02Show/hide
Query:  SKNVDKDKVAKCGGILGVSASKELGTYLGMSSLNRRNKNRMFSKVKDSIWKGLQSWKDKLFSAGGKEVLIKTVAQAISVYIMSYFRIPSSICKDINHMCA
        S NV +          GV  S+E   YLG+ S   R+K R FS++K  +W+ LQ WK+K+ SAGGKEVLIK VAQAI  Y MS F++PSS+C ++  M A
Subjt:  SKNVDKDKVAKCGGILGVSASKELGTYLGMSSLNRRNKNRMFSKVKDSIWKGLQSWKDKLFSAGGKEVLIKTVAQAISVYIMSYFRIPSSICKDINHMCA

Query:  NFLWGSVEGKRKM
         F WG    ++K+
Subjt:  NFLWGSVEGKRKM

A0A5B7AER2 Reverse transcriptase domain-containing protein4.1e-2047.79Show/hide
Query:  SKNVDKDKVAKCGGILGVSASKELGTYLGMSSLNRRNKNRMFSKVKDSIWKGLQSWKDKLFSAGGKEVLIKTVAQAISVYIMSYFRIPSSICKDINHMCA
        S NV +DK      ILGVS       YLG+ S   R+K + F+ +KD +W+ LQ WK+KL S  G+EVLIK VAQA+  Y+MSYF+IP +IC++IN M +
Subjt:  SKNVDKDKVAKCGGILGVSASKELGTYLGMSSLNRRNKNRMFSKVKDSIWKGLQSWKDKLFSAGGKEVLIKTVAQAISVYIMSYFRIPSSICKDINHMCA

Query:  NFLWGSVEGKRKM
         F WG    +RK+
Subjt:  NFLWGSVEGKRKM

A0A5B7BN08 Reverse transcriptase domain-containing protein2.0e-1946.02Show/hide
Query:  SKNVDKDKVAKCGGILGVSASKELGTYLGMSSLNRRNKNRMFSKVKDSIWKGLQSWKDKLFSAGGKEVLIKTVAQAISVYIMSYFRIPSSICKDINHMCA
        S NV  D+  +   ILGVS       YLG+ S   R+K + F+ ++D +W+ L+ WK+KL S  G+EVLIK+VAQAI  Y+MS F+IP +IC++IN M +
Subjt:  SKNVDKDKVAKCGGILGVSASKELGTYLGMSSLNRRNKNRMFSKVKDSIWKGLQSWKDKLFSAGGKEVLIKTVAQAISVYIMSYFRIPSSICKDINHMCA

Query:  NFLWGSVEGKRKM
        NF WG    +RK+
Subjt:  NFLWGSVEGKRKM

A0A6J1CV63 uncharacterized protein LOC1110146623.1e-2046.09Show/hide
Query:  MASKNVDKDKVAKCGGILGVSASKELGTYLGMSSLNRRNKNRMFSKVKDSIWKGLQSWKDKLFSAGGKEVLIKTVAQAISVYIMSYFRIPSSICKDINHM
        M S+N  +   A     L V+ +  +G YLG+ S   RNK ++F+ + + +W+ LQ WK+KLFS+GGKEVLIK VAQAI  Y MS FR P ++CK+IN +
Subjt:  MASKNVDKDKVAKCGGILGVSASKELGTYLGMSSLNRRNKNRMFSKVKDSIWKGLQSWKDKLFSAGGKEVLIKTVAQAISVYIMSYFRIPSSICKDINHM

Query:  CANFLWGSVEGKRKM
         A F WGS + ++K+
Subjt:  CANFLWGSVEGKRKM

A0A6P6W173 uncharacterized protein LOC1137289357.7e-1944.25Show/hide
Query:  SKNVDKDKVAKCGGILGVSASKELGTYLGMSSLNRRNKNRMFSKVKDSIWKGLQSWKDKLFSAGGKEVLIKTVAQAISVYIMSYFRIPSSICKDINHMCA
        S NVD  +  +    LG       G YLG+  +  R+K ++F  +KDSI + + SWK+KL S GGKEVL+K V+ A+ VY MS F++P+ +CK+++ M A
Subjt:  SKNVDKDKVAKCGGILGVSASKELGTYLGMSSLNRRNKNRMFSKVKDSIWKGLQSWKDKLFSAGGKEVLIKTVAQAISVYIMSYFRIPSSICKDINHMCA

Query:  NFLWGSVEGKRKM
        N+ WG  EGK KM
Subjt:  NFLWGSVEGKRKM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.5e-0629.27Show/hide
Query:  YLGMSSLNRRNKNRMFSKVKDSIWKGLQSWKDKLFSAGGKEVLIKTVAQAISVYIMSYFRIPSSICKDINHMCANFLWGSVE
        YLG+  L ++     +  + + I   +  W  +  S  G+  LI +V  +++ + MS FR+PS+  K+I+ +C++FLW   E
Subjt:  YLGMSSLNRRNKNRMFSKVKDSIWKGLQSWKDKLFSAGGKEVLIKTVAQAISVYIMSYFRIPSSICKDINHMCANFLWGSVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGCAAAAATGTAGACAAGGACAAGGTGGCCAAGTGTGGGGGTATCCTTGGTGTCTCAGCTTCAAAGGAGTTAGGGACCTACTTAGGCATGTCTTCGCTTAACAG
AAGGAACAAAAACCGCATGTTCTCCAAAGTAAAAGACAGTATATGGAAAGGGCTCCAAAGCTGGAAGGATAAATTATTCTCGGCAGGTGGTAAAGAGGTCCTTATTAAAA
CAGTGGCTCAAGCCATCTCGGTGTACATCATGAGCTATTTCAGAATCCCTTCTAGCATATGCAAGGACATAAATCATATGTGTGCCAATTTTTTGTGGGGATCAGTTGAG
GGGAAGAGGAAAATGAAAGGATTTGGAATTCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGCAAAAATGTAGACAAGGACAAGGTGGCCAAGTGTGGGGGTATCCTTGGTGTCTCAGCTTCAAAGGAGTTAGGGACCTACTTAGGCATGTCTTCGCTTAACAG
AAGGAACAAAAACCGCATGTTCTCCAAAGTAAAAGACAGTATATGGAAAGGGCTCCAAAGCTGGAAGGATAAATTATTCTCGGCAGGTGGTAAAGAGGTCCTTATTAAAA
CAGTGGCTCAAGCCATCTCGGTGTACATCATGAGCTATTTCAGAATCCCTTCTAGCATATGCAAGGACATAAATCATATGTGTGCCAATTTTTTGTGGGGATCAGTTGAG
GGGAAGAGGAAAATGAAAGGATTTGGAATTCCCTAA
Protein sequenceShow/hide protein sequence
MASKNVDKDKVAKCGGILGVSASKELGTYLGMSSLNRRNKNRMFSKVKDSIWKGLQSWKDKLFSAGGKEVLIKTVAQAISVYIMSYFRIPSSICKDINHMCANFLWGSVE
GKRKMKGFGIP