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Lag0028584 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028584
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein CROWDED NUCLEI 1-like isoform X1
Genome locationchr8:25855698..25857027
RNA-Seq ExpressionLag0028584
SyntenyLag0028584
Gene Ontology termsGO:0006997 - nucleus organization (biological process)
GO:0005652 - nuclear lamina (cellular component)
InterPro domainsIPR040418 - Protein crowded nuclei


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022930031.1 protein CROWDED NUCLEI 1-like isoform X1 [Cucurbita moschata]4.3e-4979.71Show/hide
Query:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMEKLVAVNDLCDEVNGS
        G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVRTIYRSEDRVVQFESLR PEDNASMEKLV ++DLCDEVN +
Subjt:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMEKLVAVNDLCDEVNGS

Query:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT
        SEYEDEDG++IDD EDEYDEEQPDA+SIGKKIWTFFTT
Subjt:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT

XP_022993965.1 protein CROWDED NUCLEI 1-like isoform X1 [Cucurbita maxima]8.6e-5080.43Show/hide
Query:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMEKLVAVNDLCDEVNGS
        G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVRTIYRSEDRVVQFESLR PEDNASMEKLVA++DLCDEVN +
Subjt:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMEKLVAVNDLCDEVNGS

Query:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT
        SEYEDEDG++IDD EDEYDEEQPDA+SIGKKIWTFFTT
Subjt:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT

XP_022993992.1 protein CROWDED NUCLEI 1-like isoform X2 [Cucurbita maxima]8.6e-5080.43Show/hide
Query:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMEKLVAVNDLCDEVNGS
        G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVRTIYRSEDRVVQFESLR PEDNASMEKLVA++DLCDEVN +
Subjt:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMEKLVAVNDLCDEVNGS

Query:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT
        SEYEDEDG++IDD EDEYDEEQPDA+SIGKKIWTFFTT
Subjt:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT

XP_023530139.1 protein CROWDED NUCLEI 1-like isoform X1 [Cucurbita pepo subsp. pepo]2.5e-4979.71Show/hide
Query:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMEKLVAVNDLCDEVNGS
        G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVRTIYRSEDRVV+FESLR PEDNASMEKLVA++DLCDEVN +
Subjt:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMEKLVAVNDLCDEVNGS

Query:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT
        SEYEDEDG++IDD EDEYDEEQPDA+SIGKKIWTFFTT
Subjt:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT

XP_023530151.1 protein CROWDED NUCLEI 1-like isoform X2 [Cucurbita pepo subsp. pepo]2.5e-4979.71Show/hide
Query:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMEKLVAVNDLCDEVNGS
        G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVRTIYRSEDRVV+FESLR PEDNASMEKLVA++DLCDEVN +
Subjt:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMEKLVAVNDLCDEVNGS

Query:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT
        SEYEDEDG++IDD EDEYDEEQPDA+SIGKKIWTFFTT
Subjt:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT

TrEMBL top hitse value%identityAlignment
A0A5D3BPV3 Protein CROWDED NUCLEI 38.7e-4070.92Show/hide
Query:  SAGKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMEKLV--AVNDLCDE
        +AGKASATQVS NLTTVMEKENE               TP   +V GENG+K DSV++TTVRTIY SEDRVV+FES RT EDNA MEKLV   VNDLC E
Subjt:  SAGKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMEKLV--AVNDLCDE

Query:  VNGSSEYEDEDGSVIDDEDEYDEEQPDARSIGKKIWTFFTT
         NGSSEYEDED S++DDEDEYDEEQPD  SIGKKIWTFFTT
Subjt:  VNGSSEYEDEDGSVIDDEDEYDEEQPDARSIGKKIWTFFTT

A0A6J1EPS4 protein CROWDED NUCLEI 1-like isoform X12.1e-4979.71Show/hide
Query:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMEKLVAVNDLCDEVNGS
        G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVRTIYRSEDRVVQFESLR PEDNASMEKLV ++DLCDEVN +
Subjt:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMEKLVAVNDLCDEVNGS

Query:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT
        SEYEDEDG++IDD EDEYDEEQPDA+SIGKKIWTFFTT
Subjt:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT

A0A6J1ETW4 protein CROWDED NUCLEI 1-like isoform X22.1e-4979.71Show/hide
Query:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMEKLVAVNDLCDEVNGS
        G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVRTIYRSEDRVVQFESLR PEDNASMEKLV ++DLCDEVN +
Subjt:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMEKLVAVNDLCDEVNGS

Query:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT
        SEYEDEDG++IDD EDEYDEEQPDA+SIGKKIWTFFTT
Subjt:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT

A0A6J1JUG6 protein CROWDED NUCLEI 1-like isoform X24.2e-5080.43Show/hide
Query:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMEKLVAVNDLCDEVNGS
        G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVRTIYRSEDRVVQFESLR PEDNASMEKLVA++DLCDEVN +
Subjt:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMEKLVAVNDLCDEVNGS

Query:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT
        SEYEDEDG++IDD EDEYDEEQPDA+SIGKKIWTFFTT
Subjt:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT

A0A6J1K004 protein CROWDED NUCLEI 1-like isoform X14.2e-5080.43Show/hide
Query:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMEKLVAVNDLCDEVNGS
        G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVRTIYRSEDRVVQFESLR PEDNASMEKLVA++DLCDEVN +
Subjt:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMEKLVAVNDLCDEVNGS

Query:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT
        SEYEDEDG++IDD EDEYDEEQPDA+SIGKKIWTFFTT
Subjt:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTACTGCCCGATGAGAAGCATGCATTCATGTGTATCATGCACTGGAATTCCTCAAACCTGTTTGTGTTTACAATGGGTTTTGATTCAATGGAAGTTCTGTGCAGTGC
AGGCAAAGCTAGTGCAACTCAGGTTTCAGCGAACCTGACAACTGTGATGGAGAAAGAAAACGAAGGAATCTCAACAGAGAAAGTGGAACCGAGTAGGGAGGTTCTTATAA
CCCCTTCATTGAGAAGTGTTGATGGGGAGAATGGAAAAAAAACAGACTCTGTGCAGCTTACAACGGTCAGAACTATCTATCGTTCCGAGGATAGAGTAGTTCAGTTTGAA
TCGCTGAGAACTCCCGAAGATAATGCTTCCATGGAGAAGTTGGTCGCAGTCAATGATTTGTGCGATGAAGTGAATGGTTCTTCTGAATATGAAGATGAAGATGGAAGTGT
AATTGATGATGAAGATGAGTACGATGAAGAGCAGCCTGATGCGAGATCGATCGGAAAGAAGATCTGGACCTTTTTCACAACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTACTGCCCGATGAGAAGCATGCATTCATGTGTATCATGCACTGGAATTCCTCAAACCTGTTTGTGTTTACAATGGGTTTTGATTCAATGGAAGTTCTGTGCAGTGC
AGGCAAAGCTAGTGCAACTCAGGTTTCAGCGAACCTGACAACTGTGATGGAGAAAGAAAACGAAGGAATCTCAACAGAGAAAGTGGAACCGAGTAGGGAGGTTCTTATAA
CCCCTTCATTGAGAAGTGTTGATGGGGAGAATGGAAAAAAAACAGACTCTGTGCAGCTTACAACGGTCAGAACTATCTATCGTTCCGAGGATAGAGTAGTTCAGTTTGAA
TCGCTGAGAACTCCCGAAGATAATGCTTCCATGGAGAAGTTGGTCGCAGTCAATGATTTGTGCGATGAAGTGAATGGTTCTTCTGAATATGAAGATGAAGATGGAAGTGT
AATTGATGATGAAGATGAGTACGATGAAGAGCAGCCTGATGCGAGATCGATCGGAAAGAAGATCTGGACCTTTTTCACAACTTAG
Protein sequenceShow/hide protein sequence
MLLPDEKHAFMCIMHWNSSNLFVFTMGFDSMEVLCSAGKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFE
SLRTPEDNASMEKLVAVNDLCDEVNGSSEYEDEDGSVIDDEDEYDEEQPDARSIGKKIWTFFTT