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Lag0028590 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028590
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr8:25937576..25943623
RNA-Seq ExpressionLag0028590
SyntenyLag0028590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052364.1 putative Zinc finger, BED-type [Cucumis melo var. makuwa]3.5e-0682.05Show/hide
Query:  GILNLECVVRPPDIIPPATPDVAVAKAIIPFDLIVVKAA
        G+LNLEC VRPPD I  ATPDVAVAKAIIPFDLIV K+A
Subjt:  GILNLECVVRPPDIIPPATPDVAVAKAIIPFDLIVVKAA
KAG0543458.1 hypothetical protein BDA96_02G192400 [Sorghum bicolor]3.3e-0460Show/hide
Query:  GILNLECVVRPPDIIPPATPDVAVAKAIIPFDLIVVKAARYKKVLLVPPG
        GILNLEC VRPP  I  A PDVAVA AI P +  + + A Y+ VL VPPG
Subjt:  GILNLECVVRPPDIIPPATPDVAVAKAIIPFDLIVVKAARYKKVLLVPPG
KAG5532560.1 hypothetical protein RHGRI_027004 [Rhododendron griersonianum]1.9e-0459.26Show/hide
Query:  NLCGGILNLECVVRPPDIIPPATPDVAVAKAIIPFDLIVVKAARYKKVLLVPPG
        +L  GIL  EC VRP   I  ATP+VAVA AI+  DL+V   ARY+KVL VPPG
Subjt:  NLCGGILNLECVVRPPDIIPPATPDVAVAKAIIPFDLIVVKAARYKKVLLVPPG
KAG5532561.1 hypothetical protein RHGRI_027004 [Rhododendron griersonianum]4.3e-0453.12Show/hide
Query:  NLCGGILNLECVVRPPDIIPPATPDVAVAKAIIPFDLIVVKAARYKKVLLVPPGARGVKNKQRN
        +L  GIL  EC VRP   I  ATP+VAVA AI+  DL+V   ARY+KVL VPPG    K  +R+
Subjt:  NLCGGILNLECVVRPPDIIPPATPDVAVAKAIIPFDLIVVKAARYKKVLLVPPGARGVKNKQRN
KAG5532562.1 hypothetical protein RHGRI_027004 [Rhododendron griersonianum]1.1e-0454.69Show/hide
Query:  NLCGGILNLECVVRPPDIIPPATPDVAVAKAIIPFDLIVVKAARYKKVLLVPPGARGVKNKQRN
        +L  GIL  EC VRP   I  ATP+VAVA AI+  DL+V   ARY+KVL VPPG    K  Q N
Subjt:  NLCGGILNLECVVRPPDIIPPATPDVAVAKAIIPFDLIVVKAARYKKVLLVPPGARGVKNKQRN
TrEMBL top hitse value%identityAlignment
A0A2G2Y635 Uncharacterized protein2.1e-0454.55Show/hide
Query:  VNLCGGILNLECVVRPPDIIPPATPDVAVAKAIIPFDLIVVKAARYKKVLLVPPG
        +++  GILN EC VRPP  I   TP++AVAKA   FDLI    A YK V  VPPG
Subjt:  VNLCGGILNLECVVRPPDIIPPATPDVAVAKAIIPFDLIVVKAARYKKVLLVPPG
A0A5A7UAG9 Putative Zinc finger, BED-type1.7e-0682.05Show/hide
Query:  GILNLECVVRPPDIIPPATPDVAVAKAIIPFDLIVVKAA
        G+LNLEC VRPPD I  ATPDVAVAKAIIPFDLIV K+A
Subjt:  GILNLECVVRPPDIIPPATPDVAVAKAIIPFDLIVVKAA
A0A6N2C1B8 Uncharacterized protein (Fragment)4.6e-0456.6Show/hide
Query:  LCGGILNLECVVRPPDIIPPATPDVAVAKAIIPFDLIVVKAA--RYKKVLLVP
        +C GI NLECV+RPPD I  + P V VAK+IIP DL ++  A  RY+ V LVP
Subjt:  LCGGILNLECVVRPPDIIPPATPDVAVAKAIIPFDLIVVKAA--RYKKVLLVP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGACATGATCTCCAAACGCCCGAAAACTATTCTTGTTCCATTGCACAAACCATTAGATGGGTCTAAATTTTGTAGCAATGTAATTGGACAATTCACCTTCAACGT
TAATTTATGTGGAGGTATTTTGAATCTTGAATGTGTCGTTCGACCGCCAGACATAATTCCACCAGCTACACCTGATGTTGCGGTTGCTAAAGCTATCATACCTTTTGACC
TTATAGTTGTTAAAGCTGCACGATATAAAAAGGTTTTACTTGTTCCACCAGGTGCTCGGGGCGTGAAAAATAAGCAAAGGAATGAAAAGAGTAAAAAAGGAAAAAAGTCA
AATCTCGGTCAACAGCAGGCTAGCGTCGAGACGCTAGCCCTTGAGCGTCTCGACGCTCACATTCCATATCAGATTAGGCGCGTAAAGCTTACAGCGTCGAGACGCTATGA
TAGGAAGCGTCCCGACGCTACCGTTTTTCCTTATTCAGAACGCGCGTTAAAGAGGCAGCGTCGCGACGCTGTCTTGACAGCGTCTCGACGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATGACATGATCTCCAAACGCCCGAAAACTATTCTTGTTCCATTGCACAAACCATTAGATGGGTCTAAATTTTGTAGCAATGTAATTGGACAATTCACCTTCAACGT
TAATTTATGTGGAGGTATTTTGAATCTTGAATGTGTCGTTCGACCGCCAGACATAATTCCACCAGCTACACCTGATGTTGCGGTTGCTAAAGCTATCATACCTTTTGACC
TTATAGTTGTTAAAGCTGCACGATATAAAAAGGTTTTACTTGTTCCACCAGGTGCTCGGGGCGTGAAAAATAAGCAAAGGAATGAAAAGAGTAAAAAAGGAAAAAAGTCA
AATCTCGGTCAACAGCAGGCTAGCGTCGAGACGCTAGCCCTTGAGCGTCTCGACGCTCACATTCCATATCAGATTAGGCGCGTAAAGCTTACAGCGTCGAGACGCTATGA
TAGGAAGCGTCCCGACGCTACCGTTTTTCCTTATTCAGAACGCGCGTTAAAGAGGCAGCGTCGCGACGCTGTCTTGACAGCGTCTCGACGCTAA
Protein sequenceShow/hide protein sequence
MYDMISKRPKTILVPLHKPLDGSKFCSNVIGQFTFNVNLCGGILNLECVVRPPDIIPPATPDVAVAKAIIPFDLIVVKAARYKKVLLVPPGARGVKNKQRNEKSKKGKKS
NLGQQQASVETLALERLDAHIPYQIRRVKLTASRRYDRKRPDATVFPYSERALKRQRRDAVLTASRR