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Lag0028594 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028594
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:26022277..26022684
RNA-Seq ExpressionLag0028594
SyntenyLag0028594
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031753.1 gag protease polyprotein [Cucumis melo var. makuwa]6.5e-1344.17Show/hide
Query:  TGPSVFQTLSVTTRRDKKEQSVSSISHRLQYEDAMKNEKITKYDGEIRSAVPSGMKRKTFVTVDTYGSLKVKGRDVVITNPLEEDSDQEKEQTFCLHITV
        T  S F+ LSV+  RD+K+ S+S                +   D EIRSA PS MKRK FV+V+T GSLKVK  DVV T P + + + E + T C H+TV
Subjt:  TGPSVFQTLSVTTRRDKKEQSVSSISHRLQYEDAMKNEKITKYDGEIRSAVPSGMKRKTFVTVDTYGSLKVKGRDVVITNPLEEDSDQEKEQTFCLHITV

Query:  EEETEVEMSEVDEDEAPLSL
        EE ++ ++ E D + APLSL
Subjt:  EEETEVEMSEVDEDEAPLSL

KAA0037793.1 uncharacterized protein E6C27_scaffold918G00010 [Cucumis melo var. makuwa]5.0e-1346.67Show/hide
Query:  QTLSVTTRRDKKEQSVSSISHRLQYEDAMKNEK-----ITKYDGEIRSAVPSGMKRKTFVTVDT-YGSLKVKGRDVVITNPLEEDSDQEKEQTFCLHITV
        QT S    + K+  S  S+ HR+++ D   +         K + EIRS VPS MKRKTFVT++T  GSLKVK  DV++TNP +EDS+Q + +  C HIT+
Subjt:  QTLSVTTRRDKKEQSVSSISHRLQYEDAMKNEK-----ITKYDGEIRSAVPSGMKRKTFVTVDT-YGSLKVKGRDVVITNPLEEDSDQEKEQTFCLHITV

Query:  EEETEVEMSEVDEDEAPLSL
         EE E+E SE D ++AP SL
Subjt:  EEETEVEMSEVDEDEAPLSL

KAA0050182.1 gag protease polyprotein [Cucumis melo var. makuwa]1.5e-1244.17Show/hide
Query:  TGPSVFQTLSVTTRRDKKEQSVSSISHRLQYEDAMKNEKITKYDGEIRSAVPSGMKRKTFVTVDTYGSLKVKGRDVVITNPLEEDSDQEKEQTFCLHITV
        T  S F+ LSV+  R +K+ S+S          + K+  +T+ D EIRSA PS MKRK FV+V+T GSLKVK  DVV T P + + ++E +   C H+T+
Subjt:  TGPSVFQTLSVTTRRDKKEQSVSSISHRLQYEDAMKNEKITKYDGEIRSAVPSGMKRKTFVTVDTYGSLKVKGRDVVITNPLEEDSDQEKEQTFCLHITV

Query:  EEETEVEMSEVDEDEAPLSL
        EE +E ++ E D + APLSL
Subjt:  EEETEVEMSEVDEDEAPLSL

TYK02888.1 uncharacterized protein E5676_scaffold968G00270 [Cucumis melo var. makuwa]5.0e-1346.67Show/hide
Query:  QTLSVTTRRDKKEQSVSSISHRLQYEDAMKNEK-----ITKYDGEIRSAVPSGMKRKTFVTVDT-YGSLKVKGRDVVITNPLEEDSDQEKEQTFCLHITV
        QT S    + K+  S  S+ HR+++ D   +         K + EIRS VPS MKRKTFVT++T  GSLKVK  DV++TNP +EDS+Q + +  C HIT+
Subjt:  QTLSVTTRRDKKEQSVSSISHRLQYEDAMKNEK-----ITKYDGEIRSAVPSGMKRKTFVTVDT-YGSLKVKGRDVVITNPLEEDSDQEKEQTFCLHITV

Query:  EEETEVEMSEVDEDEAPLSL
         EE E+E SE D ++AP SL
Subjt:  EEETEVEMSEVDEDEAPLSL

TYK28162.1 uncharacterized protein E5676_scaffold289G00760 [Cucumis melo var. makuwa]1.5e-1258.75Show/hide
Query:  KYDGEIRSAVPSGMKRKTFVTVDT-YGSLKVKGRDVVITNPLEEDSDQEKEQTFCLHITVEEETEVEMSEVDEDEAPLSL
        K + EIRS VPS MKRKTFVT++T  GSLKVK  DV++TNP +EDS+Q +++  C HIT+ EE E+E  E D +EAP SL
Subjt:  KYDGEIRSAVPSGMKRKTFVTVDT-YGSLKVKGRDVVITNPLEEDSDQEKEQTFCLHITVEEETEVEMSEVDEDEAPLSL

TrEMBL top hitse value%identityAlignment
A0A5A7SND9 Gag protease polyprotein3.2e-1344.17Show/hide
Query:  TGPSVFQTLSVTTRRDKKEQSVSSISHRLQYEDAMKNEKITKYDGEIRSAVPSGMKRKTFVTVDTYGSLKVKGRDVVITNPLEEDSDQEKEQTFCLHITV
        T  S F+ LSV+  RD+K+ S+S                +   D EIRSA PS MKRK FV+V+T GSLKVK  DVV T P + + + E + T C H+TV
Subjt:  TGPSVFQTLSVTTRRDKKEQSVSSISHRLQYEDAMKNEKITKYDGEIRSAVPSGMKRKTFVTVDTYGSLKVKGRDVVITNPLEEDSDQEKEQTFCLHITV

Query:  EEETEVEMSEVDEDEAPLSL
        EE ++ ++ E D + APLSL
Subjt:  EEETEVEMSEVDEDEAPLSL

A0A5A7T485 Reverse transcriptase2.4e-1346.67Show/hide
Query:  QTLSVTTRRDKKEQSVSSISHRLQYEDAMKNEK-----ITKYDGEIRSAVPSGMKRKTFVTVDT-YGSLKVKGRDVVITNPLEEDSDQEKEQTFCLHITV
        QT S    + K+  S  S+ HR+++ D   +         K + EIRS VPS MKRKTFVT++T  GSLKVK  DV++TNP +EDS+Q + +  C HIT+
Subjt:  QTLSVTTRRDKKEQSVSSISHRLQYEDAMKNEK-----ITKYDGEIRSAVPSGMKRKTFVTVDT-YGSLKVKGRDVVITNPLEEDSDQEKEQTFCLHITV

Query:  EEETEVEMSEVDEDEAPLSL
         EE E+E SE D ++AP SL
Subjt:  EEETEVEMSEVDEDEAPLSL

A0A5A7U2W9 Gag protease polyprotein7.1e-1344.17Show/hide
Query:  TGPSVFQTLSVTTRRDKKEQSVSSISHRLQYEDAMKNEKITKYDGEIRSAVPSGMKRKTFVTVDTYGSLKVKGRDVVITNPLEEDSDQEKEQTFCLHITV
        T  S F+ LSV+  R +K+ S+S          + K+  +T+ D EIRSA PS MKRK FV+V+T GSLKVK  DVV T P + + ++E +   C H+T+
Subjt:  TGPSVFQTLSVTTRRDKKEQSVSSISHRLQYEDAMKNEKITKYDGEIRSAVPSGMKRKTFVTVDTYGSLKVKGRDVVITNPLEEDSDQEKEQTFCLHITV

Query:  EEETEVEMSEVDEDEAPLSL
        EE +E ++ E D + APLSL
Subjt:  EEETEVEMSEVDEDEAPLSL

A0A5D3BV77 Reverse transcriptase2.4e-1346.67Show/hide
Query:  QTLSVTTRRDKKEQSVSSISHRLQYEDAMKNEK-----ITKYDGEIRSAVPSGMKRKTFVTVDT-YGSLKVKGRDVVITNPLEEDSDQEKEQTFCLHITV
        QT S    + K+  S  S+ HR+++ D   +         K + EIRS VPS MKRKTFVT++T  GSLKVK  DV++TNP +EDS+Q + +  C HIT+
Subjt:  QTLSVTTRRDKKEQSVSSISHRLQYEDAMKNEK-----ITKYDGEIRSAVPSGMKRKTFVTVDT-YGSLKVKGRDVVITNPLEEDSDQEKEQTFCLHITV

Query:  EEETEVEMSEVDEDEAPLSL
         EE E+E SE D ++AP SL
Subjt:  EEETEVEMSEVDEDEAPLSL

A0A5D3DXC7 Reverse transcriptase domain-containing protein7.1e-1358.75Show/hide
Query:  KYDGEIRSAVPSGMKRKTFVTVDT-YGSLKVKGRDVVITNPLEEDSDQEKEQTFCLHITVEEETEVEMSEVDEDEAPLSL
        K + EIRS VPS MKRKTFVT++T  GSLKVK  DV++TNP +EDS+Q +++  C HIT+ EE E+E  E D +EAP SL
Subjt:  KYDGEIRSAVPSGMKRKTFVTVDT-YGSLKVKGRDVVITNPLEEDSDQEKEQTFCLHITVEEETEVEMSEVDEDEAPLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCATTGGGGAAGAAGAGATTACATTTTCAATTCCAGATGTGACTGGACCATCAGTTTTTCAGACGTTAAGTGTTACCACGAGAAGAGACAAAAAAGAACAGTCTGT
TTCGTCGATTTCTCACCGACTTCAATATGAAGATGCAATGAAAAATGAAAAGATCACGAAGTACGATGGAGAAATTCGTAGTGCAGTTCCTTCAGGAATGAAAAGAAAAA
CCTTTGTTACTGTCGATACGTATGGTTCCTTGAAGGTAAAGGGACGTGATGTTGTCATCACCAATCCTTTAGAAGAAGATAGTGACCAGGAGAAAGAACAAACCTTTTGT
CTTCATATTACTGTTGAAGAAGAAACAGAGGTCGAAATGTCTGAAGTAGATGAGGACGAAGCACCTTTATCACTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCATTGGGGAAGAAGAGATTACATTTTCAATTCCAGATGTGACTGGACCATCAGTTTTTCAGACGTTAAGTGTTACCACGAGAAGAGACAAAAAAGAACAGTCTGT
TTCGTCGATTTCTCACCGACTTCAATATGAAGATGCAATGAAAAATGAAAAGATCACGAAGTACGATGGAGAAATTCGTAGTGCAGTTCCTTCAGGAATGAAAAGAAAAA
CCTTTGTTACTGTCGATACGTATGGTTCCTTGAAGGTAAAGGGACGTGATGTTGTCATCACCAATCCTTTAGAAGAAGATAGTGACCAGGAGAAAGAACAAACCTTTTGT
CTTCATATTACTGTTGAAGAAGAAACAGAGGTCGAAATGTCTGAAGTAGATGAGGACGAAGCACCTTTATCACTTTAA
Protein sequenceShow/hide protein sequence
MFIGEEEITFSIPDVTGPSVFQTLSVTTRRDKKEQSVSSISHRLQYEDAMKNEKITKYDGEIRSAVPSGMKRKTFVTVDTYGSLKVKGRDVVITNPLEEDSDQEKEQTFC
LHITVEEETEVEMSEVDEDEAPLSL