| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0047995.1 retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa] | 2.3e-20 | 30.66 | Show/hide |
Query: SAKVELEKFDWKGDFGLWRRKMKALLVQQKVANFLNQEH-------------------------------------------------------------
S + E+ KF+ GDF LWR+K++A+LVQ KVA L++E
Subjt: SAKVELEKFDWKGDFGLWRRKMKALLVQQKVANFLNQEH-------------------------------------------------------------
Query: ---FFTYKMDSNKNLEENLDDFNTTCTELANAGEEIKSQDHVVILLKSLLESYKEVKVAIKYGRDKLTLNQMLDSLRLRELEIKSERKDNEVLFVRDKQK
FF YKMD +K LEENLD+F +L N GE++ ++ VILL SL E+Y+EVK AIKYG D LT++ +LD+L+ R LEIK ERKD E+L R
Subjt: ---FFTYKMDSNKNLEENLDDFNTTCTELANAGEEIKSQDHVVILLKSLLESYKEVKVAIKYGRDKLTLNQMLDSLRLRELEIKSERKDNEVLFVRDKQK
Query: HNKNRNSYNKNIGNQASGNQTYRNNNQNQHHNSNQNRGQKSFWRDNRNSNKSYQPARTNESTQISCNYCHKEGH
R +K W+ S +S ++ + C CHKEGH
Subjt: HNKNRNSYNKNIGNQASGNQTYRNNNQNQHHNSNQNRGQKSFWRDNRNSNKSYQPARTNESTQISCNYCHKEGH
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| KAA0050719.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 9.2e-22 | 31.02 | Show/hide |
Query: SAKVELEKFDWKGDFGLWRRKMKALLVQQKVANFLNQEH-------------------------------------------------------------
S + E+ KF+ GDF LWR+K++A+LVQ KVA L++E
Subjt: SAKVELEKFDWKGDFGLWRRKMKALLVQQKVANFLNQEH-------------------------------------------------------------
Query: ---FFTYKMDSNKNLEENLDDFNTTCTELANAGEEIKSQDHVVILLKSLLESYKEVKVAIKYGRDKLTLNQMLDSLRLRELEIKSERKDNEVLFVRDKQK
FF YKMD +K+LEENLD+F +L N GE++ ++ VILL SL E+Y+EVK AIKYGRD LT++ +LD+L+ R LEIK ERKD E+L R
Subjt: ---FFTYKMDSNKNLEENLDDFNTTCTELANAGEEIKSQDHVVILLKSLLESYKEVKVAIKYGRDKLTLNQMLDSLRLRELEIKSERKDNEVLFVRDKQK
Query: HNKNRNSYNKNIGNQASGNQTYRNNNQNQHHNSNQNRGQKSFWRDNRNSNKSYQPARTNESTQISCNYCHKEGH
R +K W+ S +S ++ + C CHKEGH
Subjt: HNKNRNSYNKNIGNQASGNQTYRNNNQNQHHNSNQNRGQKSFWRDNRNSNKSYQPARTNESTQISCNYCHKEGH
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| KAA0067607.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] | 8.3e-23 | 36.15 | Show/hide |
Query: SAKVELEKFDWKGDFGLWRRKMKALLVQQKVANFL------------------------------------------------------------NQEHF
S + E+ KF+ GDF +WR+K++ +LVQ KVA L N+E F
Subjt: SAKVELEKFDWKGDFGLWRRKMKALLVQQKVANFL------------------------------------------------------------NQEHF
Query: FTYKMDSNKNLEENLDDFNTTCTELANAGEEIKSQDHVVILLKSLLESYKEVKVAIKYGRDKLTLNQMLDSLRLRELEIKSERKDNEVLFVRDKQK----
F YKMD +K+LEENLD+F +L+N GE++ ++ VILL SL E+Y+EVK AIKYGRD LT++ +LD+L+ R LEIK ERKD E+L R + +
Subjt: FTYKMDSNKNLEENLDDFNTTCTELANAGEEIKSQDHVVILLKSLLESYKEVKVAIKYGRDKLTLNQMLDSLRLRELEIKSERKDNEVLFVRDKQK----
Query: HNKNRNSYNKNIG
K R+S +K+ G
Subjt: HNKNRNSYNKNIG
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| TXG70425.1 hypothetical protein EZV62_005360 [Acer yangbiense] | 1.7e-20 | 38.64 | Show/hide |
Query: MSAKVELEKFDWKGDFGLWRRKMKALLVQQKVANFLNQE-----------------------------HFFTYKMDSNKNLEENLDDFNTTCTELAN--A
+S K E+EKF+ KGDF +WR+KMKA+LVQQK A L +E + F +KMD +K+LE+NLDDF ELAN +
Subjt: MSAKVELEKFDWKGDFGLWRRKMKALLVQQKVANFLNQE-----------------------------HFFTYKMDSNKNLEENLDDFNTTCTELAN--A
Query: GEEIKSQDHVVILLKSLLESYKEVKVAIKYGRDKLTLNQMLDSLRLRELEIKSERKDNEVLFVRDKQKHNKNRNSY
E + ++ VI+L L +SYK++K AIKYGRD L++ +L +LR RE+E++SE++ + + + ++ K N+Y
Subjt: GEEIKSQDHVVILLKSLLESYKEVKVAIKYGRDKLTLNQMLDSLRLRELEIKSERKDNEVLFVRDKQKHNKNRNSY
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| TYK25306.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 9.2e-22 | 31.02 | Show/hide |
Query: SAKVELEKFDWKGDFGLWRRKMKALLVQQKVANFLNQEH-------------------------------------------------------------
S + E+ KF+ GDF LWR+K++A+LVQ KVA L++E
Subjt: SAKVELEKFDWKGDFGLWRRKMKALLVQQKVANFLNQEH-------------------------------------------------------------
Query: ---FFTYKMDSNKNLEENLDDFNTTCTELANAGEEIKSQDHVVILLKSLLESYKEVKVAIKYGRDKLTLNQMLDSLRLRELEIKSERKDNEVLFVRDKQK
FF YKMD +K+LEENLD+F +L N GE++ ++ VILL SL E+Y+EVK AIKYGRD LT++ +LD+L+ R LEIK ERKD E+L R
Subjt: ---FFTYKMDSNKNLEENLDDFNTTCTELANAGEEIKSQDHVVILLKSLLESYKEVKVAIKYGRDKLTLNQMLDSLRLRELEIKSERKDNEVLFVRDKQK
Query: HNKNRNSYNKNIGNQASGNQTYRNNNQNQHHNSNQNRGQKSFWRDNRNSNKSYQPARTNESTQISCNYCHKEGH
R +K W+ S +S ++ + C CHKEGH
Subjt: HNKNRNSYNKNIGNQASGNQTYRNNNQNQHHNSNQNRGQKSFWRDNRNSNKSYQPARTNESTQISCNYCHKEGH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7U2U7 Retrotransposon protein, putative, Ty1-copia sub-class | 1.1e-20 | 30.66 | Show/hide |
Query: SAKVELEKFDWKGDFGLWRRKMKALLVQQKVANFLNQEH-------------------------------------------------------------
S + E+ KF+ GDF LWR+K++A+LVQ KVA L++E
Subjt: SAKVELEKFDWKGDFGLWRRKMKALLVQQKVANFLNQEH-------------------------------------------------------------
Query: ---FFTYKMDSNKNLEENLDDFNTTCTELANAGEEIKSQDHVVILLKSLLESYKEVKVAIKYGRDKLTLNQMLDSLRLRELEIKSERKDNEVLFVRDKQK
FF YKMD +K LEENLD+F +L N GE++ ++ VILL SL E+Y+EVK AIKYG D LT++ +LD+L+ R LEIK ERKD E+L R
Subjt: ---FFTYKMDSNKNLEENLDDFNTTCTELANAGEEIKSQDHVVILLKSLLESYKEVKVAIKYGRDKLTLNQMLDSLRLRELEIKSERKDNEVLFVRDKQK
Query: HNKNRNSYNKNIGNQASGNQTYRNNNQNQHHNSNQNRGQKSFWRDNRNSNKSYQPARTNESTQISCNYCHKEGH
R +K W+ S +S ++ + C CHKEGH
Subjt: HNKNRNSYNKNIGNQASGNQTYRNNNQNQHHNSNQNRGQKSFWRDNRNSNKSYQPARTNESTQISCNYCHKEGH
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| A0A5A7UB25 Putative gag-pol polyprotein | 4.5e-22 | 31.02 | Show/hide |
Query: SAKVELEKFDWKGDFGLWRRKMKALLVQQKVANFLNQEH-------------------------------------------------------------
S + E+ KF+ GDF LWR+K++A+LVQ KVA L++E
Subjt: SAKVELEKFDWKGDFGLWRRKMKALLVQQKVANFLNQEH-------------------------------------------------------------
Query: ---FFTYKMDSNKNLEENLDDFNTTCTELANAGEEIKSQDHVVILLKSLLESYKEVKVAIKYGRDKLTLNQMLDSLRLRELEIKSERKDNEVLFVRDKQK
FF YKMD +K+LEENLD+F +L N GE++ ++ VILL SL E+Y+EVK AIKYGRD LT++ +LD+L+ R LEIK ERKD E+L R
Subjt: ---FFTYKMDSNKNLEENLDDFNTTCTELANAGEEIKSQDHVVILLKSLLESYKEVKVAIKYGRDKLTLNQMLDSLRLRELEIKSERKDNEVLFVRDKQK
Query: HNKNRNSYNKNIGNQASGNQTYRNNNQNQHHNSNQNRGQKSFWRDNRNSNKSYQPARTNESTQISCNYCHKEGH
R +K W+ S +S ++ + C CHKEGH
Subjt: HNKNRNSYNKNIGNQASGNQTYRNNNQNQHHNSNQNRGQKSFWRDNRNSNKSYQPARTNESTQISCNYCHKEGH
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| A0A5A7VKC2 Retrotransposon protein, putative, Ty1-copia subclass | 4.0e-23 | 36.15 | Show/hide |
Query: SAKVELEKFDWKGDFGLWRRKMKALLVQQKVANFL------------------------------------------------------------NQEHF
S + E+ KF+ GDF +WR+K++ +LVQ KVA L N+E F
Subjt: SAKVELEKFDWKGDFGLWRRKMKALLVQQKVANFL------------------------------------------------------------NQEHF
Query: FTYKMDSNKNLEENLDDFNTTCTELANAGEEIKSQDHVVILLKSLLESYKEVKVAIKYGRDKLTLNQMLDSLRLRELEIKSERKDNEVLFVRDKQK----
F YKMD +K+LEENLD+F +L+N GE++ ++ VILL SL E+Y+EVK AIKYGRD LT++ +LD+L+ R LEIK ERKD E+L R + +
Subjt: FTYKMDSNKNLEENLDDFNTTCTELANAGEEIKSQDHVVILLKSLLESYKEVKVAIKYGRDKLTLNQMLDSLRLRELEIKSERKDNEVLFVRDKQK----
Query: HNKNRNSYNKNIG
K R+S +K+ G
Subjt: HNKNRNSYNKNIG
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| A0A5D3BRB2 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.5e-20 | 34.09 | Show/hide |
Query: SAKVELEKFDWKGDFGLWRRKMKALLVQQKVANFLNQ---------------------------------------------------------------
S + E+ KF+ GDF LWR+K++A+LVQ KVA L++
Subjt: SAKVELEKFDWKGDFGLWRRKMKALLVQQKVANFLNQ---------------------------------------------------------------
Query: --EHFFTYKMDSNKNLEENLDDFNTTCTELANAGEEIKSQDHVVILLKSLLESYKEVKVAIKYGRDKLTLNQMLDSLRLRELEIKSERKDNEVLFVR---
E FF YKMD +K+LEENL++F +L N GE++ ++ +ILL SL E+Y+EVK AIKYGRD LT++ + D+L+ R L+IK ERKD E+L R
Subjt: --EHFFTYKMDSNKNLEENLDDFNTTCTELANAGEEIKSQDHVVILLKSLLESYKEVKVAIKYGRDKLTLNQMLDSLRLRELEIKSERKDNEVLFVR---
Query: DKQKHNKNRNSYNKNIGNQA
DK+K S N +A
Subjt: DKQKHNKNRNSYNKNIGNQA
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| A0A5D3DNU1 Putative gag-pol polyprotein | 4.5e-22 | 31.02 | Show/hide |
Query: SAKVELEKFDWKGDFGLWRRKMKALLVQQKVANFLNQEH-------------------------------------------------------------
S + E+ KF+ GDF LWR+K++A+LVQ KVA L++E
Subjt: SAKVELEKFDWKGDFGLWRRKMKALLVQQKVANFLNQEH-------------------------------------------------------------
Query: ---FFTYKMDSNKNLEENLDDFNTTCTELANAGEEIKSQDHVVILLKSLLESYKEVKVAIKYGRDKLTLNQMLDSLRLRELEIKSERKDNEVLFVRDKQK
FF YKMD +K+LEENLD+F +L N GE++ ++ VILL SL E+Y+EVK AIKYGRD LT++ +LD+L+ R LEIK ERKD E+L R
Subjt: ---FFTYKMDSNKNLEENLDDFNTTCTELANAGEEIKSQDHVVILLKSLLESYKEVKVAIKYGRDKLTLNQMLDSLRLRELEIKSERKDNEVLFVRDKQK
Query: HNKNRNSYNKNIGNQASGNQTYRNNNQNQHHNSNQNRGQKSFWRDNRNSNKSYQPARTNESTQISCNYCHKEGH
R +K W+ S +S ++ + C CHKEGH
Subjt: HNKNRNSYNKNIGNQASGNQTYRNNNQNQHHNSNQNRGQKSFWRDNRNSNKSYQPARTNESTQISCNYCHKEGH
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