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Lag0028619 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028619
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr8:26555046..26557787
RNA-Seq ExpressionLag0028619
SyntenyLag0028619
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038045.1 uncharacterized protein E6C27_scaffold36G002470 [Cucumis melo var. makuwa]4.0e-0845.68Show/hide
Query:  IKQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEMEAKTIIEKLDSKFPSKVNNGNQH
        ++QG+KSVE YY EM  L+D LDL E+  T MA+F  GLNKEI   +DLQ Y D++EM    I  K++ +F +++   N +
Subjt:  IKQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEMEAKTIIEKLDSKFPSKVNNGNQH

XP_022157414.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia]4.5e-0758.62Show/hide
Query:  IKQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEM
        ++QGSKSVE YY EM  L++ LDL ED    MARF  GLNKEIA  +DLQ Y +++EM
Subjt:  IKQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEM

XP_022158803.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025268 [Momordica charantia]4.5e-0758.62Show/hide
Query:  IKQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEM
        ++QGSKSVE YY EM  L++ LDL ED    MARF  GLNKEIA  +DLQ Y +++EM
Subjt:  IKQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEM

XP_023518111.1 beta-galactosidase 15-like [Cucurbita pepo subsp. pepo]4.5e-0758.62Show/hide
Query:  IKQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEM
        +KQGSKSVE YY EM  L+D LDL ED    M RF  GLN EIA   DLQ Y D++E+
Subjt:  IKQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEM

XP_038887118.1 uncharacterized protein K02A2.6-like [Benincasa hispida]4.0e-0862.07Show/hide
Query:  IKQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEM
        ++QG+KSVE YY EM  L+D LDL ED  T MARF  GLNKEIA  +DLQ Y D++EM
Subjt:  IKQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEM

TrEMBL top hitse value%identityAlignment
A0A5A7T993 Retrotrans_gag domain-containing protein2.0e-0845.68Show/hide
Query:  IKQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEMEAKTIIEKLDSKFPSKVNNGNQH
        ++QG+KSVE YY EM  L+D LDL E+  T MA+F  GLNKEI   +DLQ Y D++EM    I  K++ +F +++   N +
Subjt:  IKQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEMEAKTIIEKLDSKFPSKVNNGNQH

A0A6J0LKD5 uncharacterized protein LOC1088314163.7e-0743.82Show/hide
Query:  IKQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEM-----EAKTIIEKLDSKFPSKVN-NGNQHMK
        +KQGSKSVE YY E +KL + LDL EDE T MA+F  GL   +++ ++ Q YGDL ++     +A+  I+K  +K  S+ N N N + K
Subjt:  IKQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEM-----EAKTIIEKLDSKFPSKVN-NGNQHMK

A0A6J1DWE9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110241152.2e-0758.62Show/hide
Query:  IKQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEM
        ++QGSKSVE YY EM  L++ LDL ED    MARF  GLNKEIA  +DLQ Y +++EM
Subjt:  IKQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEM

A0A6J1DX46 LOW QUALITY PROTEIN: uncharacterized protein LOC1110252682.2e-0758.62Show/hide
Query:  IKQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEM
        ++QGSKSVE YY EM  L++ LDL ED    MARF  GLNKEIA  +DLQ Y +++EM
Subjt:  IKQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEM

A0A6J1DYV9 uncharacterized protein LOC1110255393.7e-0750Show/hide
Query:  IKQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEM
        ++QG+KSVE YY +M+ L++ +D+ E+E  TMARF  GLN E+A  +DLQ+Y D++E+
Subjt:  IKQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAAGAGGATTTTGCAAGACTTCATCGAAGCATGGAGAAAATGACCATGCAATTTGAGAAATTGGATGCAAGGATCAAATCCGTGGAGAAACAACCAGCCTTTCT
TATCCGAAAGGAGAGATCTAATCCAATGCACCATAAGGAGTATTGGGAGGTCAAAGAAAAGAATATGGTGGAGGTTTCCAAGCTGTCCAACGGAGAAATTCAAGAGACAT
TTATAAAACAAGGGAGCAAAAGTGTAGAGGCTTACTACATGGAGATGCAAAAATTGCTTGATGAACTTGATCTTTACGAGGATGAGATGACTACCATGGCTCGTTTCTTT
AGAGGACTTAATAAGGAGATTGCTGCCCTACTTGATCTTCAACTTTATGGAGATTTAGACGAGATGGAAGCCAAAACAATCATTGAGAAGCTTGATTCAAAGTTCCCTTC
TAAAGTCAACAATGGCAACCAACACATGAAATTAATGCCAATGCATTTCTTGAGAGGCAAAACTCCAAATTTGCTTCTAAGTTCATCCATGGCAGCACGCATAAGGTGTT
CAAACCGGGTGATTGGGTTTGGAAACACTATTGGAAGGATCCTTATTCTTTTAATAAGAAACCCAAGTGGAGATCCAAATGCGGTTTACCAATCACATCCCATGACTACA
AAATTGCTCTACAAGGCGAGAGGGATGATCATTCAAGTAGCTTTGATCAACTACTTGTGGAGTGATTCGAATCTCGAGTTTAGAAACGAGTTTTCTCTACTCTTGATCTT
GATCATCAAGAAAACACGACGGCGTCAAGACGCCAAGGCAACGTATCGACGCTGCGAACTTTATACTCCGGCCAATTTTCGCATCGGCGTCGAGACGCCAAGGCAGCGTC
TCGACACCAGCCTTGATTCTCGACTTGCTGCTTTAATTCTCGGTCTTGTCCCGCTTCTTCTCGGTACGGGGCTTCAATCTTCAGCTTTTGGTGTCATTCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTCAAGAGGATTTTGCAAGACTTCATCGAAGCATGGAGAAAATGACCATGCAATTTGAGAAATTGGATGCAAGGATCAAATCCGTGGAGAAACAACCAGCCTTTCT
TATCCGAAAGGAGAGATCTAATCCAATGCACCATAAGGAGTATTGGGAGGTCAAAGAAAAGAATATGGTGGAGGTTTCCAAGCTGTCCAACGGAGAAATTCAAGAGACAT
TTATAAAACAAGGGAGCAAAAGTGTAGAGGCTTACTACATGGAGATGCAAAAATTGCTTGATGAACTTGATCTTTACGAGGATGAGATGACTACCATGGCTCGTTTCTTT
AGAGGACTTAATAAGGAGATTGCTGCCCTACTTGATCTTCAACTTTATGGAGATTTAGACGAGATGGAAGCCAAAACAATCATTGAGAAGCTTGATTCAAAGTTCCCTTC
TAAAGTCAACAATGGCAACCAACACATGAAATTAATGCCAATGCATTTCTTGAGAGGCAAAACTCCAAATTTGCTTCTAAGTTCATCCATGGCAGCACGCATAAGGTGTT
CAAACCGGGTGATTGGGTTTGGAAACACTATTGGAAGGATCCTTATTCTTTTAATAAGAAACCCAAGTGGAGATCCAAATGCGGTTTACCAATCACATCCCATGACTACA
AAATTGCTCTACAAGGCGAGAGGGATGATCATTCAAGTAGCTTTGATCAACTACTTGTGGAGTGATTCGAATCTCGAGTTTAGAAACGAGTTTTCTCTACTCTTGATCTT
GATCATCAAGAAAACACGACGGCGTCAAGACGCCAAGGCAACGTATCGACGCTGCGAACTTTATACTCCGGCCAATTTTCGCATCGGCGTCGAGACGCCAAGGCAGCGTC
TCGACACCAGCCTTGATTCTCGACTTGCTGCTTTAATTCTCGGTCTTGTCCCGCTTCTTCTCGGTACGGGGCTTCAATCTTCAGCTTTTGGTGTCATTCTTTAG
Protein sequenceShow/hide protein sequence
MSQEDFARLHRSMEKMTMQFEKLDARIKSVEKQPAFLIRKERSNPMHHKEYWEVKEKNMVEVSKLSNGEIQETFIKQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFF
RGLNKEIAALLDLQLYGDLDEMEAKTIIEKLDSKFPSKVNNGNQHMKLMPMHFLRGKTPNLLLSSSMAARIRCSNRVIGFGNTIGRILILLIRNPSGDPNAVYQSHPMTT
KLLYKARGMIIQVALINYLWSDSNLEFRNEFSLLLILIIKKTRRRQDAKATYRRCELYTPANFRIGVETPRQRLDTSLDSRLAALILGLVPLLLGTGLQSSAFGVIL