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Lag0028621 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028621
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:26619965..26620612
RNA-Seq ExpressionLag0028621
SyntenyLag0028621
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG60685.1 hypothetical protein EZV62_015258 [Acer yangbiense]3.3e-2736.53Show/hide
Query:  GPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEIEED
        GPW FD++L+VLE P     IS   F    FW+++ NLP+   +R +A  +   IG  +E+  + +E CWG  IR+KV IDI+KPLLR   L   +  E 
Subjt:  GPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEIEED

Query:  CWVTIKYERLPEFCFGCGIIGHGLKDCTFGKERERQNSG---EFGSWLKFQGFFKQTKKENS---------PPRDQEFDQTKGNNEESNIPTDMNKALEI
            + YERLPEFC+ CGIIGHGL+DC     R     G   ++GSWL+     +Q+K  NS         PP   + +QT  N++ +        +++ 
Subjt:  CWVTIKYERLPEFCFGCGIIGHGLKDCTFGKERERQNSG---EFGSWLKFQGFFKQTKKENS---------PPRDQEFDQTKGNNEESNIPTDMNKALEI

Query:  ERDKDIV--IWQVKNNQED
        ER + ++  +  V N  ED
Subjt:  ERDKDIV--IWQVKNNQED

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]2.1e-3740.64Show/hide
Query:  MKSGPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEI
        MK+GPW FDK L+VL+ P  ++ IS  +F    FWI L +LPM + ++ +A ++GN+IG F+++DC  K F WG S+RI+V IDITKPL RG  +     
Subjt:  MKSGPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEI

Query:  EEDCWVTIKYERLPEFCFGCGIIGHGLKDCT---FGKERERQNSGEFGSWLKFQGF---FKQTKKENSPPRDQEFDQTKGNNEESNI
           CW+ I+YERLP+FC+ CG+IGH   DC       + + + + E+G WL+F G     ++ +K  SP R+     +  N++E  +
Subjt:  EEDCWVTIKYERLPEFCFGCGIIGHGLKDCT---FGKERERQNSGEFGSWLKFQGF---FKQTKKENSPPRDQEFDQTKGNNEESNI

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]2.6e-2738.16Show/hide
Query:  MKSGPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEI
        +  GPW FDKHL++L     N + S  +     FW+ + NLP+   ++ V E +GN++G+F++MD E     WG ++RI+V++D+ KPL RG  L  L  
Subjt:  MKSGPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEI

Query:  EEDCWVTIKYERLPEFCFGCGIIGHGLKDC---TFGKERERQNSGEFGSWLK
         E  WV  KYERLP +C+ CG +GH  ++C       +  R +S ++G+WL+
Subjt:  EEDCWVTIKYERLPEFCFGCGIIGHGLKDC---TFGKERERQNSGEFGSWLK

XP_035543083.1 uncharacterized protein LOC118346304 [Juglans regia]1.4e-2836.54Show/hide
Query:  MKSGPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEI
        ++ GPW FDK L++++    ++++   K QEA FW+R+ +LP+   +  V E+IG  IGK  E+D  + E  WG  +++++++D+ KPLLRG     +  
Subjt:  MKSGPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEI

Query:  EEDCWVTIKYERLPEFCFGCGIIGHGLKDCTF---GKERERQNSGEFGSWLKFQGF
         E CWV   YERLP FC+ CG +GHG ++C       E +   S  +G+WL+   +
Subjt:  EEDCWVTIKYERLPEFCFGCGIIGHGLKDCTF---GKERERQNSGEFGSWLKFQGF

XP_042988686.1 uncharacterized protein LOC122316216 [Carya illinoinensis]8.5e-3140.62Show/hide
Query:  MKSGPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEI
        ++ GPW FDKHL++++    N+++   K +EA FW+RL +LP+   +  V  +IG  IG+ LE+D +  E  WG+ +R++VS+DI KPLLRG     +  
Subjt:  MKSGPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEI

Query:  EEDCWVTIKYERLPEFCFGCGIIGHGLKDCTFGKERERQ-------NSGEFGSWLKFQGF
        E+ CWV   YERL  FCF CG +GHG ++C    ER+ Q       +S  +GSWL+   +
Subjt:  EEDCWVTIKYERLPEFCFGCGIIGHGLKDCTFGKERERQ-------NSGEFGSWLKFQGF

TrEMBL top hitse value%identityAlignment
A0A2N9E949 CCHC-type domain-containing protein9.5e-2837.5Show/hide
Query:  MKSGPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEI
        + +GPW FDK+L++L++   ++++   +  EA FWI++  LP    +   A  +GN++G   E+D       WG  +R++V ID++ PLLR   ++ L  
Subjt:  MKSGPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEI

Query:  EEDCWVTIKYERLPEFCFGCGIIGHGLKDCTFGKERERQNSG---EFGSWLK
        EE  WVT+KYE+LP FC+ CGI+GH  ++C    + E+   G   E+GSWL+
Subjt:  EEDCWVTIKYERLPEFCFGCGIIGHGLKDCTFGKERERQNSG---EFGSWLK

A0A5C7HLB9 Uncharacterized protein2.8e-2741.98Show/hide
Query:  GPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEIEED
        GPW F   L+VLE P  +  I+   F +A FW+++  +P+   +R  A+ +   IG+ +++  E +E CWG  +R+KV IDITKPL R   L+  + EE 
Subjt:  GPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEIEED

Query:  CWVTIKYERLPEFCFGCGIIGHGLKDCTFGKERERQNSG---EFGSWLKFQGFFKQTKKENS
          V++KYERLPEFCF CG IGHG+K C   + R+    G    FGSWLK     K   K  S
Subjt:  CWVTIKYERLPEFCFGCGIIGHGLKDCTFGKERERQNSG---EFGSWLKFQGFFKQTKKENS

A0A5C7HUW5 CCHC-type domain-containing protein1.6e-2736.53Show/hide
Query:  GPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEIEED
        GPW FD++L+VLE P     IS   F    FW+++ NLP+   +R +A  +   IG  +E+  + +E CWG  IR+KV IDI+KPLLR   L   +  E 
Subjt:  GPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEIEED

Query:  CWVTIKYERLPEFCFGCGIIGHGLKDCTFGKERERQNSG---EFGSWLKFQGFFKQTKKENS---------PPRDQEFDQTKGNNEESNIPTDMNKALEI
            + YERLPEFC+ CGIIGHGL+DC     R     G   ++GSWL+     +Q+K  NS         PP   + +QT  N++ +        +++ 
Subjt:  CWVTIKYERLPEFCFGCGIIGHGLKDCTFGKERERQNSG---EFGSWLKFQGFFKQTKKENS---------PPRDQEFDQTKGNNEESNIPTDMNKALEI

Query:  ERDKDIV--IWQVKNNQED
        ER + ++  +  V N  ED
Subjt:  ERDKDIV--IWQVKNNQED

A0A6J1DU55 uncharacterized protein LOC1110231351.0e-3740.64Show/hide
Query:  MKSGPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEI
        MK+GPW FDK L+VL+ P  ++ IS  +F    FWI L +LPM + ++ +A ++GN+IG F+++DC  K F WG S+RI+V IDITKPL RG  +     
Subjt:  MKSGPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEI

Query:  EEDCWVTIKYERLPEFCFGCGIIGHGLKDCT---FGKERERQNSGEFGSWLKFQGF---FKQTKKENSPPRDQEFDQTKGNNEESNI
           CW+ I+YERLP+FC+ CG+IGH   DC       + + + + E+G WL+F G     ++ +K  SP R+     +  N++E  +
Subjt:  EEDCWVTIKYERLPEFCFGCGIIGHGLKDCT---FGKERERQNSGEFGSWLKFQGF---FKQTKKENSPPRDQEFDQTKGNNEESNI

A0A6P9EFS2 uncharacterized protein LOC1183463046.6e-2936.54Show/hide
Query:  MKSGPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEI
        ++ GPW FDK L++++    ++++   K QEA FW+R+ +LP+   +  V E+IG  IGK  E+D  + E  WG  +++++++D+ KPLLRG     +  
Subjt:  MKSGPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEI

Query:  EEDCWVTIKYERLPEFCFGCGIIGHGLKDCTF---GKERERQNSGEFGSWLKFQGF
         E CWV   YERLP FC+ CG +GHG ++C       E +   S  +G+WL+   +
Subjt:  EEDCWVTIKYERLPEFCFGCGIIGHGLKDCTF---GKERERQNSGEFGSWLKFQGF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGTGGGCCTTGGCTATTCGACAAGCATCTGATGGTCCTTGAAATTCCTGCGAAAAATGAAAGAATATCAAGTTTTAAATTCCAAGAAGCCATATTTTGGATAAG
ACTGATTAATCTCCCGATGGGCTATGAAAGTAGATTAGTGGCAGAAAAAATAGGTAACTCAATTGGGAAGTTCTTGGAAATGGACTGTGAAAGGAAGGAGTTTTGTTGGG
GAAACAGTATCAGAATCAAGGTCAGTATTGATATTACGAAGCCTCTTTTGAGAGGTTTTATGTTAAGAGGACTCGAGATTGAAGAAGATTGTTGGGTGACAATCAAGTAC
GAAAGATTACCTGAGTTCTGTTTTGGTTGTGGTATAATTGGGCATGGATTGAAAGATTGCACATTTGGAAAGGAGAGGGAAAGACAGAATAGTGGTGAGTTTGGGAGCTG
GCTTAAGTTTCAGGGCTTCTTCAAACAAACAAAGAAAGAAAACTCTCCACCAAGAGACCAAGAGTTTGATCAGACAAAGGGAAATAATGAGGAATCAAACATACCAACGG
ATATGAACAAAGCCCTGGAAATAGAAAGAGATAAGGATATTGTTATATGGCAAGTGAAAAATAACCAGGAGGATACCTTGAGTAATGAAGGGACATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGTGGGCCTTGGCTATTCGACAAGCATCTGATGGTCCTTGAAATTCCTGCGAAAAATGAAAGAATATCAAGTTTTAAATTCCAAGAAGCCATATTTTGGATAAG
ACTGATTAATCTCCCGATGGGCTATGAAAGTAGATTAGTGGCAGAAAAAATAGGTAACTCAATTGGGAAGTTCTTGGAAATGGACTGTGAAAGGAAGGAGTTTTGTTGGG
GAAACAGTATCAGAATCAAGGTCAGTATTGATATTACGAAGCCTCTTTTGAGAGGTTTTATGTTAAGAGGACTCGAGATTGAAGAAGATTGTTGGGTGACAATCAAGTAC
GAAAGATTACCTGAGTTCTGTTTTGGTTGTGGTATAATTGGGCATGGATTGAAAGATTGCACATTTGGAAAGGAGAGGGAAAGACAGAATAGTGGTGAGTTTGGGAGCTG
GCTTAAGTTTCAGGGCTTCTTCAAACAAACAAAGAAAGAAAACTCTCCACCAAGAGACCAAGAGTTTGATCAGACAAAGGGAAATAATGAGGAATCAAACATACCAACGG
ATATGAACAAAGCCCTGGAAATAGAAAGAGATAAGGATATTGTTATATGGCAAGTGAAAAATAACCAGGAGGATACCTTGAGTAATGAAGGGACATAA
Protein sequenceShow/hide protein sequence
MKSGPWLFDKHLMVLEIPAKNERISSFKFQEAIFWIRLINLPMGYESRLVAEKIGNSIGKFLEMDCERKEFCWGNSIRIKVSIDITKPLLRGFMLRGLEIEEDCWVTIKY
ERLPEFCFGCGIIGHGLKDCTFGKERERQNSGEFGSWLKFQGFFKQTKKENSPPRDQEFDQTKGNNEESNIPTDMNKALEIERDKDIVIWQVKNNQEDTLSNEGT