; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028628 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028628
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr8:26822790..26824501
RNA-Seq ExpressionLag0028628
SyntenyLag0028628
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022926214.1 uncharacterized protein LOC111433394 [Cucurbita moschata]7.6e-2069.12Show/hide
Query:  AVVNQVAEEACVYCGEDHNYEFCPSNPASVFFVGNQ------RNNPYSNFYNPGWRNHPNFSWGGQGS
        AV+NQ A E+CVYCGE+H ++ CPSNPAS+F+VGNQ      +NNP+SN YNPGWRNHPNFSW GQGS
Subjt:  AVVNQVAEEACVYCGEDHNYEFCPSNPASVFFVGNQ------RNNPYSNFYNPGWRNHPNFSWGGQGS

XP_022929949.1 uncharacterized protein LOC111436411 [Cucurbita moschata]8.4e-1967.16Show/hide
Query:  AAVVNQVAEEACVYCGEDHNYEFCPSNPASVFFVGNQ------RNNPYSNFYNPGWRNHPNFSWGGQ
        AA +NQ A E+CVYCGE+H ++ CPSNPAS+F+VGNQ      +NNP+SN YNPGWRNHPNFSW GQ
Subjt:  AAVVNQVAEEACVYCGEDHNYEFCPSNPASVFFVGNQ------RNNPYSNFYNPGWRNHPNFSWGGQ

XP_030487620.1 uncharacterized protein LOC115704559 [Cannabis sativa]2.4e-1854.74Show/hide
Query:  MEPAAVVNQVAEEACVYCGEDHNYEFCPSNPASVFFVGNQ----RNNPYSNFYNPGWRNHPNFSWGGQGSSVQAQQKCWGKTTSPPFSASSQESQ
        ++PAA + Q AE +CVYCG+ H +E CPSNPASV +VGNQ     NNPYSN YNPGW++HPNFSWGGQG+S    Q    ++  P FS   +  Q
Subjt:  MEPAAVVNQVAEEACVYCGEDHNYEFCPSNPASVFFVGNQ----RNNPYSNFYNPGWRNHPNFSWGGQGSSVQAQQKCWGKTTSPPFSASSQESQ

XP_030507648.1 uncharacterized protein LOC115722545 [Cannabis sativa]3.2e-1855.21Show/hide
Query:  MEPAAVVNQVAEEACVYCGEDHNYEFCPSNPASVFFVGNQ----RNNPYSNFYNPGWRNHPNFSWGGQGSSVQAQQKCWGKTTSPP-FSASSQESQ
        ++PAA + Q AE +CVYCG+ H +E CPSN ASV +VGNQ     NNPYSN YNP W++HPNFSWGGQG+S    Q+  GK + PP FS   +  Q
Subjt:  MEPAAVVNQVAEEACVYCGEDHNYEFCPSNPASVFFVGNQ----RNNPYSNFYNPGWRNHPNFSWGGQGSSVQAQQKCWGKTTSPP-FSASSQESQ

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]2.2e-1956.25Show/hide
Query:  MEPAAVVNQVAEEACVYCGEDHNYEFCPSNPASVFFVGNQ----RNNPYSNFYNPGWRNHPNFSWGGQGSSVQAQQKCWGKTTSPP-FSASSQESQ
        ++PAA + Q AE +CVYCG+ H +E CPSNPASV +VGNQ     NNPYSN YNP W++HPNFSWGGQG+S    Q+  GK + PP FS   +  Q
Subjt:  MEPAAVVNQVAEEACVYCGEDHNYEFCPSNPASVFFVGNQ----RNNPYSNFYNPGWRNHPNFSWGGQGSSVQAQQKCWGKTTSPP-FSASSQESQ

TrEMBL top hitse value%identityAlignment
A0A6J1EEI2 uncharacterized protein LOC1114333943.7e-2069.12Show/hide
Query:  AVVNQVAEEACVYCGEDHNYEFCPSNPASVFFVGNQ------RNNPYSNFYNPGWRNHPNFSWGGQGS
        AV+NQ A E+CVYCGE+H ++ CPSNPAS+F+VGNQ      +NNP+SN YNPGWRNHPNFSW GQGS
Subjt:  AVVNQVAEEACVYCGEDHNYEFCPSNPASVFFVGNQ------RNNPYSNFYNPGWRNHPNFSWGGQGS

A0A6J1EQ90 uncharacterized protein LOC1114364114.1e-1967.16Show/hide
Query:  AAVVNQVAEEACVYCGEDHNYEFCPSNPASVFFVGNQ------RNNPYSNFYNPGWRNHPNFSWGGQ
        AA +NQ A E+CVYCGE+H ++ CPSNPAS+F+VGNQ      +NNP+SN YNPGWRNHPNFSW GQ
Subjt:  AAVVNQVAEEACVYCGEDHNYEFCPSNPASVFFVGNQ------RNNPYSNFYNPGWRNHPNFSWGGQ

A0A6J1G7Q6 uncharacterized protein LOC1114515984.6e-1562.32Show/hide
Query:  AAVVNQVAEEACVYCGEDHNYEFCPSNPASVFFVGNQ------RNNPYSNFYNPGWRNHPNFSWGGQGS
        A V+ Q A E+CVYCGE H ++ CPSNPAS+F+VGNQ      + NP SN YNPGWRNHPNF   GQGS
Subjt:  AAVVNQVAEEACVYCGEDHNYEFCPSNPASVFFVGNQ------RNNPYSNFYNPGWRNHPNFSWGGQGS

A0A6J1H7E4 uncharacterized protein LOC1114611687.7e-1865.22Show/hide
Query:  AAVVNQVAEEACVYCGEDHNYEFCPSNPASVFFV------GNQRNNPYSNFYNPGWRNHPNFSWGGQGS
        AAV+ Q A E+CVYCGE+H ++ CP NPAS+ +V      GNQ+NNP SN YNPGWRNHPNFSW GQGS
Subjt:  AAVVNQVAEEACVYCGEDHNYEFCPSNPASVFFV------GNQRNNPYSNFYNPGWRNHPNFSWGGQGS

U5CZQ0 Uncharacterized protein2.0e-1859.3Show/hide
Query:  MEPAAVVNQVAEEACVYCGEDHNYEFCPSNPASVFFVGNQ----RNNPYSNFYNPGWRNHPNFSWGGQGSSVQAQQKCWGKTTSPP
        ++PAA + Q AE +CVYCG+ H +E CPSNPASV +VGNQ     NNPYSN YNP W++HPNFSWGGQG+S    Q   GK + PP
Subjt:  MEPAAVVNQVAEEACVYCGEDHNYEFCPSNPASVFFVGNQ----RNNPYSNFYNPGWRNHPNFSWGGQGSSVQAQQKCWGKTTSPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCCTGCTGCAGTGGTGAACCAAGTCGCAGAAGAAGCATGTGTCTATTGTGGTGAAGATCACAACTACGAGTTTTGCCCCAGCAATCCAGCTTCTGTGTTTTTTGT
AGGTAATCAGAGGAATAACCCTTACTCTAACTTTTATAATCCAGGTTGGCGCAACCACCCCAACTTCTCATGGGGAGGACAAGGAAGTAGTGTGCAAGCGCAACAAAAGT
GTTGGGGAAAAACAACTTCCCCACCTTTTTCTGCCAGCAGTCAAGAATCTCAAAGAAATTATTTTTCCTACGTCAATACTCATGAGCGAAGAATAGCAAAGCAAGCAATA
CCTGGTCCCGAGACACAGTTGAGTCGTGAGTTGTTGGCAAGCAAATTGTTGATGAAGCGAATAAAAGGTAACCTTTGCTCCTCAACCTCGTCAGCCTCAGCAATACCTTT
GCCCTTGTCTTCTCTTCGCTTGGCAAAATCTCTTCCTCAGCCTTCTTTGCTTCTTCTTCTCTTGCCTTGTCTCAGCCTCCTTCTTTTCCACTCTCTTCTTCTTCCTCAGA
ATCATGATGGAGGTGATGGGGTATTCCGGATCACCCTGATGGGCCCCTTCCTCTTAATGCGGCGTCGCTTTGGTGGTTCAGGCATTATTACTTCTACCCGAGCCTCCTGC
ACGGTTCCTGTTCATTCCCTTCTTCAGGCACCACGCGTGGCAACATCCTCTCCACCTCCTGAACCTTTCTTGTTCTGCAACCCTCTGTTGCTTCCTTCTTCTCTTGGCTT
CTTTCTCCTCCGGGTCTTTTTCTTTTTGCCTTTACTTTCTGTACCTCAGGGTATCGCAACCTCTTCCACCTCATTCTCTCTTCTTTCTTGCTCGTTTTTCGCCATGAAAC
TCAAAGATTTTACAGAGAAAGCACGAAGGAAGAAGAAAAGAATACGAACAGGAAGAAGTAAATCGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCCTGCTGCAGTGGTGAACCAAGTCGCAGAAGAAGCATGTGTCTATTGTGGTGAAGATCACAACTACGAGTTTTGCCCCAGCAATCCAGCTTCTGTGTTTTTTGT
AGGTAATCAGAGGAATAACCCTTACTCTAACTTTTATAATCCAGGTTGGCGCAACCACCCCAACTTCTCATGGGGAGGACAAGGAAGTAGTGTGCAAGCGCAACAAAAGT
GTTGGGGAAAAACAACTTCCCCACCTTTTTCTGCCAGCAGTCAAGAATCTCAAAGAAATTATTTTTCCTACGTCAATACTCATGAGCGAAGAATAGCAAAGCAAGCAATA
CCTGGTCCCGAGACACAGTTGAGTCGTGAGTTGTTGGCAAGCAAATTGTTGATGAAGCGAATAAAAGGTAACCTTTGCTCCTCAACCTCGTCAGCCTCAGCAATACCTTT
GCCCTTGTCTTCTCTTCGCTTGGCAAAATCTCTTCCTCAGCCTTCTTTGCTTCTTCTTCTCTTGCCTTGTCTCAGCCTCCTTCTTTTCCACTCTCTTCTTCTTCCTCAGA
ATCATGATGGAGGTGATGGGGTATTCCGGATCACCCTGATGGGCCCCTTCCTCTTAATGCGGCGTCGCTTTGGTGGTTCAGGCATTATTACTTCTACCCGAGCCTCCTGC
ACGGTTCCTGTTCATTCCCTTCTTCAGGCACCACGCGTGGCAACATCCTCTCCACCTCCTGAACCTTTCTTGTTCTGCAACCCTCTGTTGCTTCCTTCTTCTCTTGGCTT
CTTTCTCCTCCGGGTCTTTTTCTTTTTGCCTTTACTTTCTGTACCTCAGGGTATCGCAACCTCTTCCACCTCATTCTCTCTTCTTTCTTGCTCGTTTTTCGCCATGAAAC
TCAAAGATTTTACAGAGAAAGCACGAAGGAAGAAGAAAAGAATACGAACAGGAAGAAGTAAATCGAAGTGA
Protein sequenceShow/hide protein sequence
MEPAAVVNQVAEEACVYCGEDHNYEFCPSNPASVFFVGNQRNNPYSNFYNPGWRNHPNFSWGGQGSSVQAQQKCWGKTTSPPFSASSQESQRNYFSYVNTHERRIAKQAI
PGPETQLSRELLASKLLMKRIKGNLCSSTSSASAIPLPLSSLRLAKSLPQPSLLLLLLPCLSLLLFHSLLLPQNHDGGDGVFRITLMGPFLLMRRRFGGSGIITSTRASC
TVPVHSLLQAPRVATSSPPPEPFLFCNPLLLPSSLGFFLLRVFFFLPLLSVPQGIATSSTSFSLLSCSFFAMKLKDFTEKARRKKKRIRTGRSKSK