; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028632 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028632
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr8:26916793..26919663
RNA-Seq ExpressionLag0028632
SyntenyLag0028632
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAE6523816.1 Tir4p [Saccharomyces cerevisiae PE-2]7.9e-0528.6Show/hide
Query:  AAVSSPNFEGSHVLRCNSFLPKFEGSHVASLQFLPPSSK-VSCVLLQFLLSTFKFSRIRYSSFPPSSKVLTRFGEVPSPSLKVLTCFGEVPSSQVRRFLR
        AA SS     S +    S       S V S    P SS+ VS  +          S    SS   SS V     EV S S  V +   EV SS V     
Subjt:  AAVSSPNFEGSHVLRCNSFLPKFEGSHVASLQFLPPSSK-VSCVLLQFLLSTFKFSRIRYSSFPPSSKVLTRFGEVPSPSLKVLTCFGEVPSSQVRRFLR

Query:  ASLQFLPPSSKVLTRFGEVPSSKSEGSHALRCSSFLTVRRFSRASFLPPSSKVLTRFGEVPSSKSEGSHALRCSSFPQVRRFSRASLQFLPPKFEGSHVA
               PSS  +      PSS    S ++  SS   V     +S  P SS+V++    V SS SE + +    S  +V   S AS          S VA
Subjt:  ASLQFLPPSSKVLTRFGEVPSSKSEGSHALRCSSFLTVRRFSRASFLPPSSKVLTRFGEVPSSKSEGSHALRCSSFPQVRRFSRASLQFLPPKFEGSHVA

Query:  SLQFLPPSLKVLTSLRLRCASLQFLPPSSKFLPPSSKVFTRFAAVPSSKFEVPSSKFEGSHALRCTVPSSKFEGSHALRCYLPPRSKVLSRAAAAPSSKF
        S    P S +V+               SS   P SS+V +   A  SS+    S     S  +  +V SS  E   A     P  S+V+S + A+ SS+ 
Subjt:  SLQFLPPSLKVLTSLRLRCASLQFLPPSSKFLPPSSKVFTRFAAVPSSKFEVPSSKFEGSHALRCTVPSSKFEGSHALRCYLPPRSKVLSRAAAAPSSKF

Query:  EGSLTHFARSFSKFEGASLHCSFSKFEGASLRCYFPPSSKVLSRAAAVPSSKFEGSLTRFARSFSKFEGTSLHCSFSKFEGASLRCSFSKFEGASLPAPS
          S    A S S+   +S+  S S+   +S+    P SS+V+S + A  SS+   S    A S S+   +S+  S S+   +S+  S S+   +S+   +
Subjt:  EGSLTHFARSFSKFEGASLHCSFSKFEGASLRCYFPPSSKVLSRAAAVPSSKFEGSLTRFARSFSKFEGTSLHCSFSKFEGASLRCSFSKFEGASLPAPS

Query:  PSSKALLSVAPSPSSKALLSTAPSPSSKALLSTAPSPSSKVLLSTPLFEGS
        PSS  ++S + +PSS  ++S++ +PSS  ++S++ +PSS  ++S+ +   S
Subjt:  PSSKALLSVAPSPSSKALLSTAPSPSSKALLSTAPSPSSKVLLSTPLFEGS

TrEMBL top hitse value%identityAlignment
A0A3R6WL53 Uncharacterized protein7.2e-0437.44Show/hide
Query:  QFLPPSSKVLTRFGEVPSSK---SEGSHALRCSSFLTVRRFSRASFLPPSSKVLTRFGEVPSSKSEGSHALRCSSFPQVRRFSRASLQFLPPKFEGSHVA
        + LPPSSK L     +PSSK         L  S FL         FL PSS  L     +PSSK            P   +F   S  FL P        
Subjt:  QFLPPSSKVLTRFGEVPSSK---SEGSHALRCSSFLTVRRFSRASFLPPSSKVLTRFGEVPSSKSEGSHALRCSSFPQVRRFSRASLQFLPPKFEGSHVA

Query:  SLQFLPPSLK-VLTSLRLRCASLQFLPPSSKFLPPSSKVFTRFA--AVPSSKFEVPSSKFEGSHALRCTVPSSKFEGSHALRCYLPPRSKVLSRAAAAPS
        S + LPPS K +L  L+    S  FL PSSK LPPSSK         +PSSKF +P  KF         +PSSKF    +   +LPP SK L      PS
Subjt:  SLQFLPPSLK-VLTSLRLRCASLQFLPPSSKFLPPSSKVFTRFA--AVPSSKFEVPSSKFEGSHALRCTVPSSKFEGSHALRCYLPPRSKVLSRAAAAPS

Query:  SKF
        SKF
Subjt:  SKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTTGCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGATTCTTACGTCGCTTCGCTGCAGTTCCTTCCTCCAATT
CCTTCCTCCAAGTTCGAAGGTTCTCACATGCTTCGCTGCAGTTTCTTCTCCTAACTTCGAAGGTTCTCACGTGCTTCGTTGCAATTCCTTCCTCCCTAAGTTTGAAGGTT
CTCACGTTGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTTCATGCGTTTTGCTGCAGTTCCTTCTCTCCACGTTCAAATTCTCACGCATTCGCTACAGTTCATTT
CCTCCAAGTTCAAAGGTTCTCACGCGCTTCGGTGAAGTTCCTTCTCCAAGTCTGAAGGTTCTCACGTGCTTCGGTGAAGTTCCTTCCTCCCAAGTTCGAAGGTTCTTACG
CGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGGTGAAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCA
CAGTTCGAAGATTCTCACGCGCTTCGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGGTGAAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGCGCTTCGCTGC
AGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCACTGCAGTTCCTTCCTCCAAGTTTGAA
GGTTCTCACATCGCTTCGCTTGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTTTCACGCGCTTCGCTGCAGTTCCTT
CCTCCAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGCTGCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTACCTTCCT
CCAAGATCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCACTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCA
CTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTACTTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCCC
TCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCACTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGCTGCTCCTTCTCCAAGTTCGAAGGC
GCTTCTCTCCCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCT
TCTCTCTACTGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCTACCCCTCTTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCACCGTTGCTCC
TTTTCAAATGTTTGGCGGCGGTTGACGTCCTCGTTCCGCTTCATCTTCAAATGTTGGTAGTTGACGACGTCCGCTGCGCTTCATCTTCAAATGTTGGCAGTGGTGAAGTC
ACTGCAATTGAATCTGATGACGACCGTTGTAGGCGAGTCGGGTCTGGTGACCACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCA
TCACTGTAGGCAAATCTGGAGTGCATCACTGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTTGCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGATTCTTACGTCGCTTCGCTGCAGTTCCTTCCTCCAATT
CCTTCCTCCAAGTTCGAAGGTTCTCACATGCTTCGCTGCAGTTTCTTCTCCTAACTTCGAAGGTTCTCACGTGCTTCGTTGCAATTCCTTCCTCCCTAAGTTTGAAGGTT
CTCACGTTGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTTCATGCGTTTTGCTGCAGTTCCTTCTCTCCACGTTCAAATTCTCACGCATTCGCTACAGTTCATTT
CCTCCAAGTTCAAAGGTTCTCACGCGCTTCGGTGAAGTTCCTTCTCCAAGTCTGAAGGTTCTCACGTGCTTCGGTGAAGTTCCTTCCTCCCAAGTTCGAAGGTTCTTACG
CGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGGTGAAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCA
CAGTTCGAAGATTCTCACGCGCTTCGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGGTGAAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGCGCTTCGCTGC
AGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCACTGCAGTTCCTTCCTCCAAGTTTGAA
GGTTCTCACATCGCTTCGCTTGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTTTCACGCGCTTCGCTGCAGTTCCTT
CCTCCAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGCTGCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTACCTTCCT
CCAAGATCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCACTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCA
CTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTACTTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCCC
TCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCACTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGCTGCTCCTTCTCCAAGTTCGAAGGC
GCTTCTCTCCCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCT
TCTCTCTACTGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCTACCCCTCTTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCACCGTTGCTCC
TTTTCAAATGTTTGGCGGCGGTTGACGTCCTCGTTCCGCTTCATCTTCAAATGTTGGTAGTTGACGACGTCCGCTGCGCTTCATCTTCAAATGTTGGCAGTGGTGAAGTC
ACTGCAATTGAATCTGATGACGACCGTTGTAGGCGAGTCGGGTCTGGTGACCACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCA
TCACTGTAGGCAAATCTGGAGTGCATCACTGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAG
Protein sequenceShow/hide protein sequence
MEVASSKFEGSHALRCSSFPPSSKILTSLRCSSFLQFLPPSSKVLTCFAAVSSPNFEGSHVLRCNSFLPKFEGSHVASLQFLPPSSKVSCVLLQFLLSTFKFSRIRYSSF
PPSSKVLTRFGEVPSPSLKVLTCFGEVPSSQVRRFLRASLQFLPPSSKVLTRFGEVPSSKSEGSHALRCSSFLTVRRFSRASFLPPSSKVLTRFGEVPSSKSEGSHALRC
SSFPQVRRFSRASLQFLPPKFEGSHVASLQFLPPSLKVLTSLRLRCASLQFLPPSSKFLPPSSKVFTRFAAVPSSKFEVPSSKFEGSHALRCTVPSSKFEGSHALRCYLP
PRSKVLSRAAAAPSSKFEGSLTHFARSFSKFEGASLHCSFSKFEGASLRCYFPPSSKVLSRAAAVPSSKFEGSLTRFARSFSKFEGTSLHCSFSKFEGASLRCSFSKFEG
ASLPAPSPSSKALLSVAPSPSSKALLSTAPSPSSKALLSTAPSPSSKVLLSTPLFEGSPLRFSFSKFEGSPLLLFKCLAAVDVLVPLHLQMLVVDDVRCASSSNVGSGEV
TAIESDDDRCRRVGSGDHPCRLLRSPNKMGTGLAGVHHCRQIWSASLKANLVTTPAGYSDHPIKWGLV