| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0035697.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 1.2e-33 | 47.71 | Show/hide |
Query: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVAQSNLVTIKEKSK--------HQRKKDPKKLQPMR--------------KRSKKFS
KVDD YCKYH VI HPVE+CFVLK+LILKLA E+KI+LD+DE+AQ+N V ++ S QR+K+ ++ K +
Subjt: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVAQSNLVTIKEKSK--------HQRKKDPKKLQPMR--------------KRSKKFS
Query: QPQQLDLRLRSHQASNYSSLAFQRMSMAAIEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSI
+ +Q + S S FQR+SMA EEENQ TST+ SAF+RL +S SKK RPSTS FDRLK+T+ Q +++M L+ K F E N+D K+ S +
Subjt: QPQQLDLRLRSHQASNYSSLAFQRMSMAAIEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSI
Query: PSRMKRKFSVLINTEGSL
SRMKRK SV INTEGSL
Subjt: PSRMKRKFSVLINTEGSL
|
|
| KAA0056121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 5.6e-34 | 47.68 | Show/hide |
Query: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVAQSNLVTIKEKSKHQRKKDPKKLQPMRK--------RSKKFSQPQQLDLRLRSHQA
KVDDP YCKYHRVI HPVE+CFVLK+LILKLA E+KIELD+DEVAQ+N I+ S + KD LQ R RS P+++ H A
Subjt: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVAQSNLVTIKEKSKHQRKKDPKKLQPMRK--------RSKKFSQPQQLDLRLRSHQA
Query: S------NYS---------------------------SLAFQRMSMAAIEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDN
S NY S FQR+S+A EEENQC TR S +RLS+ST KK RPSTS FDRLK+T+ Q +R+M +
Subjt: S------NYS---------------------------SLAFQRMSMAAIEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDN
Query: LEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSL
+ K F E N D K+ S +PSRMKRK V INTEGSL
Subjt: LEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSL
|
|
| KAA0065608.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 7.3e-34 | 46.64 | Show/hide |
Query: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVAQSNLVTIKEKSK--------HQRKKDPKKLQPMRKRSKKFSQPQQLDLRLRSHQA
KVDDP YCKYHRVI H +E+CFVLK+LILKLA + KIELD+DEVAQ+N + S Q + + + + + ++D S++
Subjt: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVAQSNLVTIKEKSK--------HQRKKDPKKLQPMRKRSKKFSQPQQLDLRLRSHQA
Query: SNYS-------------------SLAFQRMSMAAIEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKK
+ S S FQR+SMA EEE QC ST TR S F+RLS+STSKK RPSTS FDRLK+T+ Q +++M +L+ K F E N D K
Subjt: SNYS-------------------SLAFQRMSMAAIEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKK
Query: LQSSIPSRMKRKFSVLINTEGSL
+ S +PSR KRK SV INTEGSL
Subjt: LQSSIPSRMKRKFSVLINTEGSL
|
|
| KAA0065984.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.1e-32 | 46.84 | Show/hide |
Query: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVAQSNLVTIKEKSKHQRKKDPKKLQPMRK--------RSKKFSQPQQLDLRLRSHQA
KVDDP YCKYHRVI HPVE+CFVLK+LILKLA E KI+LD+DE + KD LQP R RS P+++ H
Subjt: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVAQSNLVTIKEKSKHQRKKDPKKLQPMRK--------RSKKFSQPQQLDLRLRSHQA
Query: S------NYS---------------------------SLAFQRMSMAAIEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDN
S NY SL FQR+SMA EEENQC ST TR SAF+RLS+STSKK RPSTS FDRLK+ + Q +R+M +
Subjt: S------NYS---------------------------SLAFQRMSMAAIEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDN
Query: LEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSL
L+ K F E N D K+ S IPS RK SV IN EGSL
Subjt: LEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSL
|
|
| TYK15207.1 Retrotransposon gag protein [Cucumis melo var. makuwa] | 1.1e-32 | 46.19 | Show/hide |
Query: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVAQSNLVTIK-----EKSKHQRKKDPKKLQPMR--------KRSKKFSQPQQLD---
KVDDP YCKYHRVI HPVE+CF+LK++ILKLA E+KIELD+ EVAQ+N V ++ S H +++ + + ++ +++D
Subjt: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVAQSNLVTIK-----EKSKHQRKKDPKKLQPMR--------KRSKKFSQPQQLD---
Query: -LRLRSH-----QASNYSSLAFQRMSMAAIEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSI
++ R++ + S S FQR SMA EE+NQC MSTST+ SAF+RLS+STSK+ RP TS FDRLK+T+ Q +R+M L+ K F E N+D K+ + +
Subjt: -LRLRSH-----QASNYSSLAFQRMSMAAIEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSI
Query: PSRMKRKFSVLINTE-GSLKFLL
PS MKRK V INTE GS+ +
Subjt: PSRMKRKFSVLINTE-GSLKFLL
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7URH1 Ty3-gypsy retrotransposon protein | 2.7e-34 | 47.68 | Show/hide |
Query: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVAQSNLVTIKEKSKHQRKKDPKKLQPMRK--------RSKKFSQPQQLDLRLRSHQA
KVDDP YCKYHRVI HPVE+CFVLK+LILKLA E+KIELD+DEVAQ+N I+ S + KD LQ R RS P+++ H A
Subjt: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVAQSNLVTIKEKSKHQRKKDPKKLQPMRK--------RSKKFSQPQQLDLRLRSHQA
Query: S------NYS---------------------------SLAFQRMSMAAIEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDN
S NY S FQR+S+A EEENQC TR S +RLS+ST KK RPSTS FDRLK+T+ Q +R+M +
Subjt: S------NYS---------------------------SLAFQRMSMAAIEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDN
Query: LEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSL
+ K F E N D K+ S +PSRMKRK V INTEGSL
Subjt: LEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSL
|
|
| A0A5A7VFA5 Ty3-gypsy retrotransposon protein | 5.1e-33 | 46.84 | Show/hide |
Query: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVAQSNLVTIKEKSKHQRKKDPKKLQPMRK--------RSKKFSQPQQLDLRLRSHQA
KVDDP YCKYHRVI HPVE+CFVLK+LILKLA E KI+LD+DE + KD LQP R RS P+++ H
Subjt: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVAQSNLVTIKEKSKHQRKKDPKKLQPMRK--------RSKKFSQPQQLDLRLRSHQA
Query: S------NYS---------------------------SLAFQRMSMAAIEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDN
S NY SL FQR+SMA EEENQC ST TR SAF+RLS+STSKK RPSTS FDRLK+ + Q +R+M +
Subjt: S------NYS---------------------------SLAFQRMSMAAIEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDN
Query: LEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSL
L+ K F E N D K+ S IPS RK SV IN EGSL
Subjt: LEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSL
|
|
| A0A5D3CA53 Retrotransposon gag protein | 3.5e-34 | 46.64 | Show/hide |
Query: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVAQSNLVTIKEKSK--------HQRKKDPKKLQPMRKRSKKFSQPQQLDLRLRSHQA
KVDDP YCKYHRVI H +E+CFVLK+LILKLA + KIELD+DEVAQ+N + S Q + + + + + ++D S++
Subjt: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVAQSNLVTIKEKSK--------HQRKKDPKKLQPMRKRSKKFSQPQQLDLRLRSHQA
Query: SNYS-------------------SLAFQRMSMAAIEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKK
+ S S FQR+SMA EEE QC ST TR S F+RLS+STSKK RPSTS FDRLK+T+ Q +++M +L+ K F E N D K
Subjt: SNYS-------------------SLAFQRMSMAAIEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKK
Query: LQSSIPSRMKRKFSVLINTEGSL
+ S +PSR KRK SV INTEGSL
Subjt: LQSSIPSRMKRKFSVLINTEGSL
|
|
| A0A5D3CTF5 Retrotransposon gag protein | 5.1e-33 | 46.19 | Show/hide |
Query: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVAQSNLVTIK-----EKSKHQRKKDPKKLQPMR--------KRSKKFSQPQQLD---
KVDDP YCKYHRVI HPVE+CF+LK++ILKLA E+KIELD+ EVAQ+N V ++ S H +++ + + ++ +++D
Subjt: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVAQSNLVTIK-----EKSKHQRKKDPKKLQPMR--------KRSKKFSQPQQLD---
Query: -LRLRSH-----QASNYSSLAFQRMSMAAIEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSI
++ R++ + S S FQR SMA EE+NQC MSTST+ SAF+RLS+STSK+ RP TS FDRLK+T+ Q +R+M L+ K F E N+D K+ + +
Subjt: -LRLRSH-----QASNYSSLAFQRMSMAAIEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSI
Query: PSRMKRKFSVLINTE-GSLKFLL
PS MKRK V INTE GS+ +
Subjt: PSRMKRKFSVLINTE-GSLKFLL
|
|
| A0A5D3E4T1 Retrotransposon gag protein | 6.0e-34 | 47.71 | Show/hide |
Query: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVAQSNLVTIKEKSK--------HQRKKDPKKLQPMR--------------KRSKKFS
KVDD YCKYH VI HPVE+CFVLK+LILKLA E+KI+LD+DE+AQ+N V ++ S QR+K+ ++ K +
Subjt: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVAQSNLVTIKEKSK--------HQRKKDPKKLQPMR--------------KRSKKFS
Query: QPQQLDLRLRSHQASNYSSLAFQRMSMAAIEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSI
+ +Q + S S FQR+SMA EEENQ TST+ SAF+RL +S SKK RPSTS FDRLK+T+ Q +++M L+ K F E N+D K+ S +
Subjt: QPQQLDLRLRSHQASNYSSLAFQRMSMAAIEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSI
Query: PSRMKRKFSVLINTEGSL
SRMKRK SV INTEGSL
Subjt: PSRMKRKFSVLINTEGSL
|
|
