; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028644 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028644
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:27407687..27410722
RNA-Seq ExpressionLag0028644
SyntenyLag0028644
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG50019.1 hypothetical protein EZV62_025894 [Acer yangbiense]4.2e-2738.2Show/hide
Query:  EFGNQLTEGNYGGSSCFATGEKVQVMSTGPWAFDRSLVILKEPRSTGLVLDVEFNDCAFWVQIHNVPMRWQTKEMAQQLGKKIEPVEEV--GGSRDCDWT
        EF  ++ EGN    +     ++  V+  GPW+FD++L++L+EP   G + +++F+  AFW+QIH VP+   T E+ + LG  I  V+E+  GGS DC   
Subjt:  EFGNQLTEGNYGGSSCFATGEKVQVMSTGPWAFDRSLVILKEPRSTGLVLDVEFNDCAFWVQIHNVPMRWQTKEMAQQLGKKIEPVEEV--GGSRDCDWT

Query:  GSILWIRVLLRMDRPLRRGFRLQD-EEGKEFRCSVLYEWLPDLCYECGYFGHSRRECGVVGEGV-VEHQGEQYGDWLR
        G  + +RV++ + +PLRR  R+    +GKE    + YE LPD CY CG  GH  R+C +V   V  E     +G WLR
Subjt:  GSILWIRVLLRMDRPLRRGFRLQD-EEGKEFRCSVLYEWLPDLCYECGYFGHSRRECGVVGEGV-VEHQGEQYGDWLR

TXG72009.1 hypothetical protein EZV62_000588 [Acer yangbiense]1.0e-2535.59Show/hide
Query:  EFGNQLTEGNYGGSSCFATGEKVQVMSTGPWAFDRSLVILKEPRSTGLVLDVEFNDCAFWVQIHNVPMRWQTKEMAQQLGKKIEPVEEVGGSRDCDWTGS
        +F  ++  GN    +  +  ++ QV+  GPW+FD++L++L+EP   G +  ++FN  AFWVQIHNVP+   T E+ + LG+ +  V+EV   +  +  G 
Subjt:  EFGNQLTEGNYGGSSCFATGEKVQVMSTGPWAFDRSLVILKEPRSTGLVLDVEFNDCAFWVQIHNVPMRWQTKEMAQQLGKKIEPVEEVGGSRDCDWTGS

Query:  ILWIRVLLRMDRPLRRGFRLQ-DEEGKEFRCSVLYEWLPDLCYECGYFGHSRREC--GVVGEGVVEHQGEQYGDWLR
         + +RV++++D+PLRR  R+    +G E    + YE LP+ C+ CG  GH+ R C    VG+G  E+  + +G WL+
Subjt:  ILWIRVLLRMDRPLRRGFRLQ-DEEGKEFRCSVLYEWLPDLCYECGYFGHSRREC--GVVGEGVVEHQGEQYGDWLR

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.2e-3739.91Show/hide
Query:  EKVQVMSTGPWAFDRSLVILKEPRSTGLVLDVEFNDCAFWVQIHNVPMRWQTKEMAQQLGKKIEPVEEVGGSRDCDWTGSILWIRVLLRMDRPLRRGFRL
        EK +V+S+GPW F++SL++L  P +T   LD+ FN CAFW+QIHN+P    + EMA  LG K+  VEE+ G     W G  + +RV + + +PLRRG +L
Subjt:  EKVQVMSTGPWAFDRSLVILKEPRSTGLVLDVEFNDCAFWVQIHNVPMRWQTKEMAQQLGKKIEPVEEVGGSRDCDWTGSILWIRVLLRMDRPLRRGFRL

Query:  QDEEGKEFRCSVLYEWLPDLCYECGYFGHSRRECGVVGEGVVEHQGEQYGDWLRV-----------------GVGFGKG----GRRSQEGGVESAVNRMP
        ++ +GK+  C + YE LPD CYECG  GHS REC    + V  +  EQYGDWLR                  G  FG+G    G R   G          
Subjt:  QDEEGKEFRCSVLYEWLPDLCYECGYFGHSRRECGVVGEGVVEHQGEQYGDWLRV-----------------GVGFGKG----GRRSQEGGVESAVNRMP

Query:  EVPKP-PSEGQVVQELVPEKTGEENVTA
        ++  P  S  + V+E V     EE+VTA
Subjt:  EVPKP-PSEGQVVQELVPEKTGEENVTA

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]3.1e-3046.62Show/hide
Query:  EKVQVMSTGPWAFDRSLVILKEPRSTGLVLDVEFNDCAFWVQIHNVPMRWQTKEMAQQLGKKIEPVEEVGGSRDCDWTGSILWIRVLLRMDRPLRRGFRL
        EK++V S GPW FD+SL+IL    +    LD++ + CAFWVQIH +     TK+MA+ LG ++  VEEV G    DW    LW+RV + + +PLRRG ++
Subjt:  EKVQVMSTGPWAFDRSLVILKEPRSTGLVLDVEFNDCAFWVQIHNVPMRWQTKEMAQQLGKKIEPVEEVGGSRDCDWTGSILWIRVLLRMDRPLRRGFRL

Query:  QDEEGKEFRCSVLYEWLPDLCYECGYFGHSRRE
        +  +GK+  C + YE LPD CY CG  GHS RE
Subjt:  QDEEGKEFRCSVLYEWLPDLCYECGYFGHSRRE

XP_024045326.1 uncharacterized protein LOC112100347 [Citrus clementina]1.9e-2434.97Show/hide
Query:  FATGEKVQVMSTGPWAFDRSLVILKEPRSTGLVLDVEFNDCAFWVQIHNVPMRWQTKEMAQQLGKKIEPVEEVGGSRDCDWTGSILWIRVLLRMDRPLRR
        ++  +K +V+  GPW FDR+L++L+EP+  G V D  F+  +FWVQ+HNVP+        +++G KI  VE+V      D  G  + +R+ + + + L++
Subjt:  FATGEKVQVMSTGPWAFDRSLVILKEPRSTGLVLDVEFNDCAFWVQIHNVPMRWQTKEMAQQLGKKIEPVEEVGGSRDCDWTGSILWIRVLLRMDRPLRR

Query:  GFRLQDEEGKEFRCSVLYEWLPDLCYECGYFGHSRRECGVVGEGVVEHQGE-----QYGDWLR
          R+Q E G+E    V+YE LPD C+ C + GH  REC        +++G+      YG WL+
Subjt:  GFRLQDEEGKEFRCSVLYEWLPDLCYECGYFGHSRRECGVVGEGVVEHQGE-----QYGDWLR

TrEMBL top hitse value%identityAlignment
A0A5C7GZQ4 CCHC-type domain-containing protein2.0e-2738.2Show/hide
Query:  EFGNQLTEGNYGGSSCFATGEKVQVMSTGPWAFDRSLVILKEPRSTGLVLDVEFNDCAFWVQIHNVPMRWQTKEMAQQLGKKIEPVEEV--GGSRDCDWT
        EF  ++ EGN    +     ++  V+  GPW+FD++L++L+EP   G + +++F+  AFW+QIH VP+   T E+ + LG  I  V+E+  GGS DC   
Subjt:  EFGNQLTEGNYGGSSCFATGEKVQVMSTGPWAFDRSLVILKEPRSTGLVLDVEFNDCAFWVQIHNVPMRWQTKEMAQQLGKKIEPVEEV--GGSRDCDWT

Query:  GSILWIRVLLRMDRPLRRGFRLQD-EEGKEFRCSVLYEWLPDLCYECGYFGHSRRECGVVGEGV-VEHQGEQYGDWLR
        G  + +RV++ + +PLRR  R+    +GKE    + YE LPD CY CG  GH  R+C +V   V  E     +G WLR
Subjt:  GSILWIRVLLRMDRPLRRGFRLQD-EEGKEFRCSVLYEWLPDLCYECGYFGHSRRECGVVGEGV-VEHQGEQYGDWLR

A0A5C7ISE3 CCHC-type domain-containing protein5.0e-2635.59Show/hide
Query:  EFGNQLTEGNYGGSSCFATGEKVQVMSTGPWAFDRSLVILKEPRSTGLVLDVEFNDCAFWVQIHNVPMRWQTKEMAQQLGKKIEPVEEVGGSRDCDWTGS
        +F  ++  GN    +  +  ++ QV+  GPW+FD++L++L+EP   G +  ++FN  AFWVQIHNVP+   T E+ + LG+ +  V+EV   +  +  G 
Subjt:  EFGNQLTEGNYGGSSCFATGEKVQVMSTGPWAFDRSLVILKEPRSTGLVLDVEFNDCAFWVQIHNVPMRWQTKEMAQQLGKKIEPVEEVGGSRDCDWTGS

Query:  ILWIRVLLRMDRPLRRGFRLQ-DEEGKEFRCSVLYEWLPDLCYECGYFGHSRREC--GVVGEGVVEHQGEQYGDWLR
         + +RV++++D+PLRR  R+    +G E    + YE LP+ C+ CG  GH+ R C    VG+G  E+  + +G WL+
Subjt:  ILWIRVLLRMDRPLRRGFRLQ-DEEGKEFRCSVLYEWLPDLCYECGYFGHSRREC--GVVGEGVVEHQGEQYGDWLR

A0A5C7IT66 CCHC-type domain-containing protein1.2e-2438.5Show/hide
Query:  EKVQVMSTGPWAFDRSLVILKEPRSTGLVLDVEFNDCAFWVQIHNVPMRWQTKEMAQQLGKKIEPVEEVGGSRDCDWTGSILWIRVLLRMDRPLRRGFRL
        ++ +V+  GPW+FD +L++L+EP   G +  + FN   FWVQI NVPM   TK++ + LG  I  V EV      D  G  + +RV + +D PLRR  R+
Subjt:  EKVQVMSTGPWAFDRSLVILKEPRSTGLVLDVEFNDCAFWVQIHNVPMRWQTKEMAQQLGKKIEPVEEVGGSRDCDWTGSILWIRVLLRMDRPLRRGFRL

Query:  QD-EEGKEFRCSVLYEWLPDLCYECGYFGHSRRECGVVGE-GVVEHQGEQYGDWLRVGVGFGKGGRRSQEGGV----ESAVNRMPEV
            +G+E    + YE LP  C+ CG  GHS REC   GE G+ +  G  YG WLR      + GR +  G V    + A  R P V
Subjt:  QD-EEGKEFRCSVLYEWLPDLCYECGYFGHSRRECGVVGE-GVVEHQGEQYGDWLRVGVGFGKGGRRSQEGGV----ESAVNRMPEV

A0A6J1D765 uncharacterized protein LOC1110179025.7e-3839.91Show/hide
Query:  EKVQVMSTGPWAFDRSLVILKEPRSTGLVLDVEFNDCAFWVQIHNVPMRWQTKEMAQQLGKKIEPVEEVGGSRDCDWTGSILWIRVLLRMDRPLRRGFRL
        EK +V+S+GPW F++SL++L  P +T   LD+ FN CAFW+QIHN+P    + EMA  LG K+  VEE+ G     W G  + +RV + + +PLRRG +L
Subjt:  EKVQVMSTGPWAFDRSLVILKEPRSTGLVLDVEFNDCAFWVQIHNVPMRWQTKEMAQQLGKKIEPVEEVGGSRDCDWTGSILWIRVLLRMDRPLRRGFRL

Query:  QDEEGKEFRCSVLYEWLPDLCYECGYFGHSRRECGVVGEGVVEHQGEQYGDWLRV-----------------GVGFGKG----GRRSQEGGVESAVNRMP
        ++ +GK+  C + YE LPD CYECG  GHS REC    + V  +  EQYGDWLR                  G  FG+G    G R   G          
Subjt:  QDEEGKEFRCSVLYEWLPDLCYECGYFGHSRRECGVVGEGVVEHQGEQYGDWLRV-----------------GVGFGKG----GRRSQEGGVESAVNRMP

Query:  EVPKP-PSEGQVVQELVPEKTGEENVTA
        ++  P  S  + V+E V     EE+VTA
Subjt:  EVPKP-PSEGQVVQELVPEKTGEENVTA

A0A6J1DVS4 uncharacterized protein LOC1110235551.5e-3046.62Show/hide
Query:  EKVQVMSTGPWAFDRSLVILKEPRSTGLVLDVEFNDCAFWVQIHNVPMRWQTKEMAQQLGKKIEPVEEVGGSRDCDWTGSILWIRVLLRMDRPLRRGFRL
        EK++V S GPW FD+SL+IL    +    LD++ + CAFWVQIH +     TK+MA+ LG ++  VEEV G    DW    LW+RV + + +PLRRG ++
Subjt:  EKVQVMSTGPWAFDRSLVILKEPRSTGLVLDVEFNDCAFWVQIHNVPMRWQTKEMAQQLGKKIEPVEEVGGSRDCDWTGSILWIRVLLRMDRPLRRGFRL

Query:  QDEEGKEFRCSVLYEWLPDLCYECGYFGHSRRE
        +  +GK+  C + YE LPD CY CG  GHS RE
Subjt:  QDEEGKEFRCSVLYEWLPDLCYECGYFGHSRRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding1.1e-0624.63Show/hide
Query:  VMSTGPWAFDRSLVILKEPRSTGLVLDVEFNDCAFWVQIHNVPMRWQTKEMAQQLGKKIEPVEEVGGSRDCDWTGSILWIRVLLRMDRPLRRGFRLQDEE
        ++  GPW+F+  + +++  R T L  D EF    FW+QI  +P+R+ T  +   +G+++    E    RD     S+L  +                   
Subjt:  VMSTGPWAFDRSLVILKEPRSTGLVLDVEFNDCAFWVQIHNVPMRWQTKEMAQQLGKKIEPVEEVGGSRDCDWTGSILWIRVLLRMDRPLRRGFRLQDEE

Query:  GKEFRCSVLYEWLPDLCYECGYFGHSRRECGVVG
                 YE L + C  CG   H   EC   G
Subjt:  GKEFRCSVLYEWLPDLCYECGYFGHSRRECGVVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCATTTCAGAACAGAGAAAGAAAAAGAAGCCGACGCTGGCGGGAAGAGGAGGATCTGGCGGTGCTGGCGGGAGGAAGAGGAGCCAGGGGTGGCGGCGGAGGCAGG
AGAAGGAGGAGTCGGCCGGCGCTTGGTAGACTATCCTGCCATTAGTCTGAGGGGGTTCCGACGTGTGCTGGTTGCGGTGGGTTTGGCGGAACGGCAGTCTCGGGGCGGCG
ACGGAACGACGAGGAGAGTGGGTAACGGTCGGAGCGGAGGGGTTGTGGTTGTTGGGACCTCTGTTGTTCGCGGGCAGTGGGGAAGTGTGACAGTGCGAGGTTGTGTTTGT
TGGGGCCTCTGTTGTGCGTGGTCAGTGGTCGGTAGTGGAGGCGAGGCGGCTCCGCGGGTGAGACTGTTGGTAGGGTGGCAGGGCGTTTTGCAGGTCCTGAGCATGTGTCT
GGTCTGGTCTGGTTTGCGGGCAGGTGGCGCAGTGACGGGTTGGGGCACGGGCACGGGTGTAGTGGTTCAGCGGGATTTGTCTAAGTGGTTTCGTCTAGTGAGGGGTGTGC
GTGTGGTTGTTGGCGGGGCTTGTGTGGTTGTGCGGGCGGCAGTTGAATTCTGGGTGCTTAAGGCTTGTTTGTTGGAGTTTGGGAATCAGTTAACGGAGGGCAACTATGGA
GGATCTAGTTGTTTCGCTACAGGGGAGAAGGTGCAAGTGATGTCTACGGGTCCGTGGGCCTTTGATCGCTCCTTGGTAATTCTGAAGGAGCCGAGATCAACGGGTTTGGT
ATTGGATGTGGAGTTCAACGATTGTGCCTTTTGGGTTCAGATACACAACGTTCCTATGCGATGGCAGACGAAAGAGATGGCCCAACAATTGGGGAAGAAGATCGAACCAG
TGGAGGAGGTGGGTGGCTCACGGGATTGTGACTGGACAGGGTCGATTCTTTGGATTAGGGTTCTTCTGAGGATGGATCGACCACTCAGGAGGGGTTTTCGTCTGCAGGAC
GAGGAGGGCAAGGAGTTTCGATGCTCGGTTTTGTATGAATGGCTACCTGACTTATGTTATGAATGTGGCTACTTTGGGCACTCTAGAAGGGAGTGCGGGGTGGTTGGTGA
GGGTGTGGTGGAACACCAGGGTGAGCAGTATGGTGACTGGTTGAGAGTGGGGGTGGGGTTTGGGAAGGGTGGGAGACGGTCGCAGGAGGGAGGAGTGGAGAGTGCAGTGA
ATCGGATGCCTGAGGTCCCGAAGCCTCCTTCTGAGGGACAGGTGGTCCAAGAACTTGTTCCTGAGAAGACTGGGGAAGAGAATGTTACAGCCTTAGGGACGGTGGTGGGA
GGTCAGGATAGGGAGCAGGGAGAGCAGGGAGAGGGGGTAGTGGGGAGGAGGGGTATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGCATTTCAGAACAGAGAAAGAAAAAGAAGCCGACGCTGGCGGGAAGAGGAGGATCTGGCGGTGCTGGCGGGAGGAAGAGGAGCCAGGGGTGGCGGCGGAGGCAGG
AGAAGGAGGAGTCGGCCGGCGCTTGGTAGACTATCCTGCCATTAGTCTGAGGGGGTTCCGACGTGTGCTGGTTGCGGTGGGTTTGGCGGAACGGCAGTCTCGGGGCGGCG
ACGGAACGACGAGGAGAGTGGGTAACGGTCGGAGCGGAGGGGTTGTGGTTGTTGGGACCTCTGTTGTTCGCGGGCAGTGGGGAAGTGTGACAGTGCGAGGTTGTGTTTGT
TGGGGCCTCTGTTGTGCGTGGTCAGTGGTCGGTAGTGGAGGCGAGGCGGCTCCGCGGGTGAGACTGTTGGTAGGGTGGCAGGGCGTTTTGCAGGTCCTGAGCATGTGTCT
GGTCTGGTCTGGTTTGCGGGCAGGTGGCGCAGTGACGGGTTGGGGCACGGGCACGGGTGTAGTGGTTCAGCGGGATTTGTCTAAGTGGTTTCGTCTAGTGAGGGGTGTGC
GTGTGGTTGTTGGCGGGGCTTGTGTGGTTGTGCGGGCGGCAGTTGAATTCTGGGTGCTTAAGGCTTGTTTGTTGGAGTTTGGGAATCAGTTAACGGAGGGCAACTATGGA
GGATCTAGTTGTTTCGCTACAGGGGAGAAGGTGCAAGTGATGTCTACGGGTCCGTGGGCCTTTGATCGCTCCTTGGTAATTCTGAAGGAGCCGAGATCAACGGGTTTGGT
ATTGGATGTGGAGTTCAACGATTGTGCCTTTTGGGTTCAGATACACAACGTTCCTATGCGATGGCAGACGAAAGAGATGGCCCAACAATTGGGGAAGAAGATCGAACCAG
TGGAGGAGGTGGGTGGCTCACGGGATTGTGACTGGACAGGGTCGATTCTTTGGATTAGGGTTCTTCTGAGGATGGATCGACCACTCAGGAGGGGTTTTCGTCTGCAGGAC
GAGGAGGGCAAGGAGTTTCGATGCTCGGTTTTGTATGAATGGCTACCTGACTTATGTTATGAATGTGGCTACTTTGGGCACTCTAGAAGGGAGTGCGGGGTGGTTGGTGA
GGGTGTGGTGGAACACCAGGGTGAGCAGTATGGTGACTGGTTGAGAGTGGGGGTGGGGTTTGGGAAGGGTGGGAGACGGTCGCAGGAGGGAGGAGTGGAGAGTGCAGTGA
ATCGGATGCCTGAGGTCCCGAAGCCTCCTTCTGAGGGACAGGTGGTCCAAGAACTTGTTCCTGAGAAGACTGGGGAAGAGAATGTTACAGCCTTAGGGACGGTGGTGGGA
GGTCAGGATAGGGAGCAGGGAGAGCAGGGAGAGGGGGTAGTGGGGAGGAGGGGTATGTAG
Protein sequenceShow/hide protein sequence
MEHFRTEKEKEADAGGKRRIWRCWREEEEPGVAAEAGEGGVGRRLVDYPAISLRGFRRVLVAVGLAERQSRGGDGTTRRVGNGRSGGVVVVGTSVVRGQWGSVTVRGCVC
WGLCCAWSVVGSGGEAAPRVRLLVGWQGVLQVLSMCLVWSGLRAGGAVTGWGTGTGVVVQRDLSKWFRLVRGVRVVVGGACVVVRAAVEFWVLKACLLEFGNQLTEGNYG
GSSCFATGEKVQVMSTGPWAFDRSLVILKEPRSTGLVLDVEFNDCAFWVQIHNVPMRWQTKEMAQQLGKKIEPVEEVGGSRDCDWTGSILWIRVLLRMDRPLRRGFRLQD
EEGKEFRCSVLYEWLPDLCYECGYFGHSRRECGVVGEGVVEHQGEQYGDWLRVGVGFGKGGRRSQEGGVESAVNRMPEVPKPPSEGQVVQELVPEKTGEENVTALGTVVG
GQDREQGEQGEGVVGRRGM