CuGenDBv2

Gene ID	Lag0028651
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Reverse transcriptase domain-containing protein
Genome location	chr8:27500088..27500642
RNA-Seq Expression	Lag0028651
Synteny	Lag0028651
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

CAB4269469.1 unnamed protein product [Prunus armeniaca]

1.6e-46

52.12

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Query:  GRYLGLDIDFGPNKQGVFENLSKRINIRINGWVEQYLSQVGKEVLLKAVGLALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGSWEDLIKP
        GRYLGL  DFG +KQ VFE +  +IN ++ GW EQYLSQ GKEVL+KAV +A+P Y M+ F+LPI +CKEI  +++RYWW+  KE   IHW  W+ L   
Subjt:  GRYLGLDIDFGPNKQGVFENLSKRINIRINGWVEQYLSQVGKEVLLKAVGLALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGSWEDLIKP

Query:  KITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFLEATAIGRASWGWRSIL
        K  GG+  +D+ CFNLA+LAK GWR++K P +LLA  ++ +YF   DF+ A      SWGW+ IL
Subjt:  KITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFLEATAIGRASWGWRSIL

CAB4273082.1 unnamed protein product [Prunus armeniaca]

4.2e-47

50.91

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Query:  GRYLGLDIDFGPNKQGVFENLSKRINIRINGWVEQYLSQVGKEVLLKAVGLALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGSWEDLIKP
        G+YLGL+ DFG +K+GVFE + KRI  ++ GW EQYLS  GKEVL+KAV +A+P Y+M+ FKLP+ +CKEI   +  +WW+ +K++  IHW SW+ L + 
Subjt:  GRYLGLDIDFGPNKQGVFENLSKRINIRINGWVEQYLSQVGKEVLLKAVGLALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGSWEDLIKP

Query:  KITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFLEATAIGRASWGWRSIL
        K  GG+  +D+ CFNLA+LAK GWR+L+ P +LLAR+ + +Y+ H DF+ A    + SWGW+ IL
Subjt:  KITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFLEATAIGRASWGWRSIL

CAB4279811.1 unnamed protein product [Prunus armeniaca]

6.1e-46

47.67

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Query:  MEHTTRLGRYLGLDIDFGPNKQGVFENLSKRINIRINGWVEQYLSQVGKEVLLKAVGLALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGS
        + H+   G+YLGL+ DFG +K+GVFE + KRI  ++ GW EQYLS  GKEVL+KAV +A+P Y+M+ FKLP+ +CKEI   +  +WW+  K++  IHW S
Subjt:  MEHTTRLGRYLGLDIDFGPNKQGVFENLSKRINIRINGWVEQYLSQVGKEVLLKAVGLALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGS

Query:  WEDLIKPKITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFLEATAIGRASWGWRSIL
        W+ L + K  GG+  +D+ CFNLA+L K GWR+L+ P +LLAR+ + +Y+   DF+      + SWGW+ IL
Subjt:  WEDLIKPKITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFLEATAIGRASWGWRSIL

CAB4310240.1 unnamed protein product [Prunus armeniaca]

6.1e-46

47.67

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Query:  MEHTTRLGRYLGLDIDFGPNKQGVFENLSKRINIRINGWVEQYLSQVGKEVLLKAVGLALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGS
        + H+   G+YLGL+ DFG +K+GVFE + KRI  ++ GW EQYLS  GKEVL+KAV +A+P Y+M+ FKLP+ +CKEI   +  +WW+  K++  IHW S
Subjt:  MEHTTRLGRYLGLDIDFGPNKQGVFENLSKRINIRINGWVEQYLSQVGKEVLLKAVGLALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGS

Query:  WEDLIKPKITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFLEATAIGRASWGWRSIL
        W+ L + K  GG+  +D+ CFNLA+L K GWR+L+ P +LLAR+ + +Y+   DF+      + SWGW+ IL
Subjt:  WEDLIKPKITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFLEATAIGRASWGWRSIL

XP_021818901.1 uncharacterized protein LOC110760860 [Prunus avium]

3.6e-46

51.22

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Query:  RYLGLDIDFGPNKQGVFENLSKRINIRINGWVEQYLSQVGKEVLLKAVGLALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGSWEDLIKPK
        RYLGL+ DFG +KQ VFE++  +IN R+ GW EQYLSQ G EVL+KAV +A+P + M+ FKLPI +CKEI  +++ YWW+  KE   IHW  W+ L   K
Subjt:  RYLGLDIDFGPNKQGVFENLSKRINIRINGWVEQYLSQVGKEVLLKAVGLALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGSWEDLIKPK

Query:  ITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFLEATAIGRASWGWRSIL
          GG+  +D+ CFNLA+LAK GWR++K+P +LLA  F+ +YF   DF+ A     +SWGW+ I+
Subjt:  ITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFLEATAIGRASWGWRSIL

TrEMBL top hits

e value

%identity

Alignment

A0A6J5U034 Reverse transcriptase domain-containing protein

7.8e-47

52.12

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Query:  GRYLGLDIDFGPNKQGVFENLSKRINIRINGWVEQYLSQVGKEVLLKAVGLALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGSWEDLIKP
        GRYLGL  DFG +KQ VFE +  +IN ++ GW EQYLSQ GKEVL+KAV +A+P Y M+ F+LPI +CKEI  +++RYWW+  KE   IHW  W+ L   
Subjt:  GRYLGLDIDFGPNKQGVFENLSKRINIRINGWVEQYLSQVGKEVLLKAVGLALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGSWEDLIKP

Query:  KITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFLEATAIGRASWGWRSIL
        K  GG+  +D+ CFNLA+LAK GWR++K P +LLA  ++ +YF   DF+ A      SWGW+ IL
Subjt:  KITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFLEATAIGRASWGWRSIL

A0A6J5UAY2 Reverse transcriptase domain-containing protein

2.1e-47

50.91

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Query:  GRYLGLDIDFGPNKQGVFENLSKRINIRINGWVEQYLSQVGKEVLLKAVGLALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGSWEDLIKP
        G+YLGL+ DFG +K+GVFE + KRI  ++ GW EQYLS  GKEVL+KAV +A+P Y+M+ FKLP+ +CKEI   +  +WW+ +K++  IHW SW+ L + 
Subjt:  GRYLGLDIDFGPNKQGVFENLSKRINIRINGWVEQYLSQVGKEVLLKAVGLALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGSWEDLIKP

Query:  KITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFLEATAIGRASWGWRSIL
        K  GG+  +D+ CFNLA+LAK GWR+L+ P +LLAR+ + +Y+ H DF+ A    + SWGW+ IL
Subjt:  KITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFLEATAIGRASWGWRSIL

A0A6J5UV01 Reverse transcriptase domain-containing protein

3.0e-46

47.67

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Query:  MEHTTRLGRYLGLDIDFGPNKQGVFENLSKRINIRINGWVEQYLSQVGKEVLLKAVGLALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGS
        + H+   G+YLGL+ DFG +K+GVFE + KRI  ++ GW EQYLS  GKEVL+KAV +A+P Y+M+ FKLP+ +CKEI   +  +WW+  K++  IHW S
Subjt:  MEHTTRLGRYLGLDIDFGPNKQGVFENLSKRINIRINGWVEQYLSQVGKEVLLKAVGLALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGS

Query:  WEDLIKPKITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFLEATAIGRASWGWRSIL
        W+ L + K  GG+  +D+ CFNLA+L K GWR+L+ P +LLAR+ + +Y+   DF+      + SWGW+ IL
Subjt:  WEDLIKPKITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFLEATAIGRASWGWRSIL

A0A6J5X8F1 Reverse transcriptase domain-containing protein

3.0e-46

47.67

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Query:  MEHTTRLGRYLGLDIDFGPNKQGVFENLSKRINIRINGWVEQYLSQVGKEVLLKAVGLALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGS
        + H+   G+YLGL+ DFG +K+GVFE + KRI  ++ GW EQYLS  GKEVL+KAV +A+P Y+M+ FKLP+ +CKEI   +  +WW+  K++  IHW S
Subjt:  MEHTTRLGRYLGLDIDFGPNKQGVFENLSKRINIRINGWVEQYLSQVGKEVLLKAVGLALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGS

Query:  WEDLIKPKITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFLEATAIGRASWGWRSIL
        W+ L + K  GG+  +D+ CFNLA+L K GWR+L+ P +LLAR+ + +Y+   DF+      + SWGW+ IL
Subjt:  WEDLIKPKITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFLEATAIGRASWGWRSIL

A0A6P5SYW2 uncharacterized protein LOC110760860

1.7e-46

51.22

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Query:  RYLGLDIDFGPNKQGVFENLSKRINIRINGWVEQYLSQVGKEVLLKAVGLALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGSWEDLIKPK
        RYLGL+ DFG +KQ VFE++  +IN R+ GW EQYLSQ G EVL+KAV +A+P + M+ FKLPI +CKEI  +++ YWW+  KE   IHW  W+ L   K
Subjt:  RYLGLDIDFGPNKQGVFENLSKRINIRINGWVEQYLSQVGKEVLLKAVGLALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGSWEDLIKPK

Query:  ITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFLEATAIGRASWGWRSIL
          GG+  +D+ CFNLA+LAK GWR++K+P +LLA  F+ +YF   DF+ A     +SWGW+ I+
Subjt:  ITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFLEATAIGRASWGWRSIL

SwissProt top hits

e value

%identity

Alignment

P0C2F6 Putative ribonuclease H protein At1g65750

1.3e-14

30.46

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Query:  FENLSKRINIRINGWVEQYLSQVGKEVLLKAVGLALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGSWEDLIKPKITGGLNLKDIHCFNLA
        F  + +R++ R++GW E+ LS  G+  L KAV  ++P+++M+   LP  +   ++     + W    EK   H   W  +  PK  GGL ++     N A
Subjt:  FENLSKRINIRINGWVEQYLSQVGKEVLLKAVGLALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGSWEDLIKPKITGGLNLKDIHCFNLA

Query:  LLAKQGWRVLKYPGNLLARIFKARYFNHVDFLEAT--AIGRASWG--WRSI
        L++K GWR+L+   +L   + + +Y  HV  +  +   I + SW   WRSI
Subjt:  LLAKQGWRVLKYPGNLLARIFKARYFNHVDFLEAT--AIGRASWG--WRSI

P93295 Uncharacterized mitochondrial protein AtMg00310

2.4e-21

39.66

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Query:  LALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGSWEDLIKPK-ITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFL
        +ALP+Y M+ F+L   +CK++ + +  +WW   + K  I W +W+ L K K   GGL  +D+  FN ALLAKQ +R++  P  LL+R+ ++RYF H   +
Subjt:  LALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGSWEDLIKPK-ITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFL

Query:  EATAIGRASWGWRSIL
        E +   R S+ WRSI+
Subjt:  EATAIGRASWGWRSIL

Arabidopsis top hits

e value

%identity

Alignment

AT4G29090.1 Ribonuclease H-like superfamily protein

2.0e-26

48.25

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Query:  LALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGSWEDLIKPKITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFLE
        +ALP YTM  F LP  VCK+I + L  +WW+ K+E   +HW +W+ L   K  GG+  KDI  FNLALL KQ WR+L  P +L+A++FK+RYF+  D L 
Subjt:  LALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGSWEDLIKPKITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFLE

Query:  ATAIGRASWGWRSI
        A    R S+ W+SI
Subjt:  ATAIGRASWGWRSI

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

1.7e-22

39.66

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Query:  LALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGSWEDLIKPK-ITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFL
        +ALP+Y M+ F+L   +CK++ + +  +WW   + K  I W +W+ L K K   GGL  +D+  FN ALLAKQ +R++  P  LL+R+ ++RYF H   +
Subjt:  LALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGSWEDLIKPK-ITGGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFL

Query:  EATAIGRASWGWRSIL
        E +   R S+ WRSI+
Subjt:  EATAIGRASWGWRSIL

Sequences

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CDS sequence

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ATGGAGCACACGACGAGGCTAGGTAGATACTTGGGCCTCGATATCGACTTTGGGCCAAACAAACAAGGAGTATTTGAGAATTTATCAAAGAGGATCAATATAAGAATCAA
TGGATGGGTGGAGCAATACCTCTCCCAAGTCGGAAAAGAAGTTTTGTTAAAAGCGGTGGGGCTAGCACTACCAATATACACAATGAACTACTTCAAGCTGCCGATCAGAG
TCTGCAAGGAAATCAATAACAAACTTGTGCGTTACTGGTGGCAGAAAAAAAAGGAAAAGGGGAGCATTCATTGGGGTTCTTGGGAGGATCTAATAAAACCTAAGATCACT
GGTGGCTTGAACCTGAAGGACATCCATTGTTTTAACCTTGCACTATTGGCGAAGCAAGGATGGAGGGTCCTTAAATACCCAGGCAACCTACTCGCAAGAATATTCAAAGC
CCGTTATTTCAATCACGTTGATTTTCTAGAGGCAACAGCCATAGGGAGAGCATCATGGGGTTGGCGTAGCATCCTAGGAGAGACGTCTTACGGCAAGGGCTCCGCTGGCG
AATAA

mRNA sequence

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Protein sequence

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MEHTTRLGRYLGLDIDFGPNKQGVFENLSKRINIRINGWVEQYLSQVGKEVLLKAVGLALPIYTMNYFKLPIRVCKEINNKLVRYWWQKKKEKGSIHWGSWEDLIKPKIT
GGLNLKDIHCFNLALLAKQGWRVLKYPGNLLARIFKARYFNHVDFLEATAIGRASWGWRSILGETSYGKGSAGE

Lag0028651 (gene) of Sponge gourd (AG-4) v1 genome