; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028657 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028657
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:27673236..27674180
RNA-Seq ExpressionLag0028657
SyntenyLag0028657
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG50019.1 hypothetical protein EZV62_025894 [Acer yangbiense]6.0e-3540.88Show/hide
Query:  VWNAHRDTRIEFLDDNVFIICFCTTTEKRRILQGSPWNFGKSLMVLVSPNGVDDPSLLDFSWSAFWIHILNVPFNYLTATVARQLGGIVGSVESVHGEGL
        +W   ++  IE L+ N+F   F   +++R +L+G PW+F K+L+VL  P G  D   + F   AFWI I  VP   +T+ + R LG ++G V+ +   G 
Subjt:  VWNAHRDTRIEFLDDNVFIICFCTTTEKRRILQGSPWNFGKSLMVLVSPNGVDDPSLLDFSWSAFWIHILNVPFNYLTATVARQLGGIVGSVESVHGEGL

Query:  RDWLGSLIRVCVLIDVSRPLRQVLRLQ-LDEGKFCWCPIRYESLPDFCYRRGRIGHVSRECGVLDSEIS-SDFSHQFGDWL
         D +G  IRV V++DV++PLR++LR+  L +GK     +RYE LPD CYR GRIGHV R+C ++ S +   D++  FG WL
Subjt:  RDWLGSLIRVCVLIDVSRPLRQVLRLQ-LDEGKFCWCPIRYESLPDFCYRRGRIGHVSRECGVLDSEIS-SDFSHQFGDWL

XP_006485824.1 uncharacterized protein LOC102613298 [Citrus sinensis]1.9e-3337.91Show/hide
Query:  MISVWNAHRDTRIEFLDDNVFIICFCTTTEKRRILQGSPWNFGKSLMVLVSPNGVDDPSLLDFSWSAFWIHILNVPFNYLTATVARQLGGIVGSVESVHG
        M   W   ++T++E L DN+F+  F + +EK+RIL G PW+F +SLMV++ P G+ D    DF+ + FW+ I N+P   +   + +++GG +G V+ V  
Subjt:  MISVWNAHRDTRIEFLDDNVFIICFCTTTEKRRILQGSPWNFGKSLMVLVSPNGVDDPSLLDFSWSAFWIHILNVPFNYLTATVARQLGGIVGSVESVHG

Query:  EGLRDWLGSLIRVCVLIDVSRPLRQVLRLQLDEGKFCWCPIRYESLPDFCYRRGRIGHVSRECGVLDSEISSDFSHQFGDWL
        +   + +GS +RV ++++V+RPL + L L+L++G      I YE LPDFC+  G IGH  REC  LD +  S     +G W+
Subjt:  EGLRDWLGSLIRVCVLIDVSRPLRQVLRLQLDEGKFCWCPIRYESLPDFCYRRGRIGHVSRECGVLDSEISSDFSHQFGDWL

XP_015388532.1 uncharacterized protein LOC107178176 [Citrus sinensis]3.6e-3237.36Show/hide
Query:  MISVWNAHRDTRIEFLDDNVFIICFCTTTEKRRILQGSPWNFGKSLMVLVSPNGVDDPSLLDFSWSAFWIHILNVPFNYLTATVARQLGGIVGSVESVHG
        M   W   ++T++E L DN+FI  F + +EK+RIL G PW+F +SLMV+  P G+ D    DF+ + FW+ I N+P   +   + +++GG +G V+ V  
Subjt:  MISVWNAHRDTRIEFLDDNVFIICFCTTTEKRRILQGSPWNFGKSLMVLVSPNGVDDPSLLDFSWSAFWIHILNVPFNYLTATVARQLGGIVGSVESVHG

Query:  EGLRDWLGSLIRVCVLIDVSRPLRQVLRLQLDEGKFCWCPIRYESLPDFCYRRGRIGHVSRECGVLDSEISSDFSHQFGDWL
          + + +GS +R+ ++++V+ PL + L L+L++G      I YE LPDFC+  G IGH  REC  LD +  S     +G W+
Subjt:  EGLRDWLGSLIRVCVLIDVSRPLRQVLRLQLDEGKFCWCPIRYESLPDFCYRRGRIGHVSRECGVLDSEISSDFSHQFGDWL

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]3.3e-4938.16Show/hide
Query:  MISVWNAHRDTRIEFLDDNVFIICFCTTTEKRRILQGSPWNFGKSLMVLVSPNGVDDPSLLDFSWSAFWIHILNVPFNYLTATVARQLGGIVGSVESVHG
        M SVW  H  TR E L  N+++I F + +EK R+L   PW F KSL+VL SP   + P  ++F++ AFWI I N+PF  ++  +A  LG  +G VE + G
Subjt:  MISVWNAHRDTRIEFLDDNVFIICFCTTTEKRRILQGSPWNFGKSLMVLVSPNGVDDPSLLDFSWSAFWIHILNVPFNYLTATVARQLGGIVGSVESVHG

Query:  EGLRDWLGSLIRVCVLIDVSRPLRQVLRLQLDEGKFCWCPIRYESLPDFCYRRGRIGHVSRECGVLDSEISSDFSHQFGDWLCVASLRTSPQYPLSAPSF
        +G   W G  IRV V IDVS+PLR+ ++L+  +GK  WCP+RYE LPDFCY  G+IGH  REC      ++++   Q+GDWL    L+ S  +P     F
Subjt:  EGLRDWLGSLIRVCVLIDVSRPLRQVLRLQLDEGKFCWCPIRYESLPDFCYRRGRIGHVSRECGVLDSEISSDFSHQFGDWLCVASLRTSPQYPLSAPSF

Query:  FTGGRGDRGRTV--GNDENEDW-----------GPVLDANTGVLDGAD-LPDEICTVNMAMGVGEASATQSLVAPKDVADQEI
        + GGR  RG  V  G     DW           GP       V +G D +P+E      ++   E +  Q+ +  + + +Q I
Subjt:  FTGGRGDRGRTV--GNDENEDW-----------GPVLDANTGVLDGAD-LPDEICTVNMAMGVGEASATQSLVAPKDVADQEI

XP_024035600.1 uncharacterized protein LOC112096408 [Citrus clementina]3.6e-3237.36Show/hide
Query:  MISVWNAHRDTRIEFLDDNVFIICFCTTTEKRRILQGSPWNFGKSLMVLVSPNGVDDPSLLDFSWSAFWIHILNVPFNYLTATVARQLGGIVGSVESVHG
        M   W   ++T++E L DN+F+  F + +EK+RIL G PW+F +SLMV+  P G+ D    DF+ + FW+ I N+P   +   + +++GG +G V+ V  
Subjt:  MISVWNAHRDTRIEFLDDNVFIICFCTTTEKRRILQGSPWNFGKSLMVLVSPNGVDDPSLLDFSWSAFWIHILNVPFNYLTATVARQLGGIVGSVESVHG

Query:  EGLRDWLGSLIRVCVLIDVSRPLRQVLRLQLDEGKFCWCPIRYESLPDFCYRRGRIGHVSRECGVLDSEISSDFSHQFGDWL
        +   + +GS +RV ++++V+RPL + L L+L++       I YE LPDFC+  G IGH  REC  LD +  S     +G W+
Subjt:  EGLRDWLGSLIRVCVLIDVSRPLRQVLRLQLDEGKFCWCPIRYESLPDFCYRRGRIGHVSRECGVLDSEISSDFSHQFGDWL

TrEMBL top hitse value%identityAlignment
A0A1S8AC25 CCHC-type domain-containing protein (Fragment)1.3e-3035.87Show/hide
Query:  MISVWNAHRDTRIEFLDDNVFIICFCTTTEKRRILQGSPWNFGKSLMVLVSPNGVDDPSLLDFSWSAFWIHILNVPFNYLTATVARQLGGIVGSVESVHG
        M  VW   R+ +IE L +NVF+  F +  +KR I+ G PW+F ++L+ L  P G+ D    DFS  +FW+ I +VP   ++  +A +LG ++G VE V  
Subjt:  MISVWNAHRDTRIEFLDDNVFIICFCTTTEKRRILQGSPWNFGKSLMVLVSPNGVDDPSLLDFSWSAFWIHILNVPFNYLTATVARQLGGIVGSVESVHG

Query:  EGLRDWLGSLIRVCVLIDVSRPLRQVLRLQLDEGKFCWCPIR--YESLPDFCYRRGRIGHVSRECGVLDSEISSDFSHQFGDWL
        +   +  G  +R+ + +D+++PL++++ L+ +E      P+R  YE LPDFC+  GRIGH  REC    S+   + +  +G WL
Subjt:  EGLRDWLGSLIRVCVLIDVSRPLRQVLRLQLDEGKFCWCPIR--YESLPDFCYRRGRIGHVSRECGVLDSEISSDFSHQFGDWL

A0A5C7GZQ4 CCHC-type domain-containing protein2.9e-3540.88Show/hide
Query:  VWNAHRDTRIEFLDDNVFIICFCTTTEKRRILQGSPWNFGKSLMVLVSPNGVDDPSLLDFSWSAFWIHILNVPFNYLTATVARQLGGIVGSVESVHGEGL
        +W   ++  IE L+ N+F   F   +++R +L+G PW+F K+L+VL  P G  D   + F   AFWI I  VP   +T+ + R LG ++G V+ +   G 
Subjt:  VWNAHRDTRIEFLDDNVFIICFCTTTEKRRILQGSPWNFGKSLMVLVSPNGVDDPSLLDFSWSAFWIHILNVPFNYLTATVARQLGGIVGSVESVHGEGL

Query:  RDWLGSLIRVCVLIDVSRPLRQVLRLQ-LDEGKFCWCPIRYESLPDFCYRRGRIGHVSRECGVLDSEIS-SDFSHQFGDWL
         D +G  IRV V++DV++PLR++LR+  L +GK     +RYE LPD CYR GRIGHV R+C ++ S +   D++  FG WL
Subjt:  RDWLGSLIRVCVLIDVSRPLRQVLRLQ-LDEGKFCWCPIRYESLPDFCYRRGRIGHVSRECGVLDSEIS-SDFSHQFGDWL

A0A5C7H214 CCHC-type domain-containing protein1.6e-3036.71Show/hide
Query:  VWNAHRDTRIEFLDDNVFIICFCTTTEKRRILQGSPWNFGKSLMVLVSPNGVDDPSLLDFSWSAFWIHILNVPFNYLTATVARQLGGIVGSVESVHGEGL
        +W       IE ++ N F   F    ++ R+LQG PW+F K+L+VL    G      + F+  AFW+ I NVP   +T  + R LGG++G V+ +   G 
Subjt:  VWNAHRDTRIEFLDDNVFIICFCTTTEKRRILQGSPWNFGKSLMVLVSPNGVDDPSLLDFSWSAFWIHILNVPFNYLTATVARQLGGIVGSVESVHGEGL

Query:  RDWLGSLIRVCVLIDVSRPLRQVLRLQ-LDEGKFCWCPIRYESLPDFCYRRGRIGHVSRECGVLDSEIS-SDFSHQFGDWLCVASLRTSPQYPLSAPSFF
         D  G  IRV V+I+V++PLR++LR+  L +G      +RYE LP+ C+R G IGHV R+C    S     DF+  FG WL  +SL  S Q   +  +  
Subjt:  RDWLGSLIRVCVLIDVSRPLRQVLRLQ-LDEGKFCWCPIRYESLPDFCYRRGRIGHVSRECGVLDSEIS-SDFSHQFGDWLCVASLRTSPQYPLSAPSFF

Query:  TG-GRGDRG-RTVGNDENEDWGPVLDANTGVLDGADL
         G G G RG +  G+   +D G  L  + G   G DL
Subjt:  TG-GRGDRG-RTVGNDENEDWGPVLDANTGVLDGADL

A0A6J1D765 uncharacterized protein LOC1110179021.6e-4938.16Show/hide
Query:  MISVWNAHRDTRIEFLDDNVFIICFCTTTEKRRILQGSPWNFGKSLMVLVSPNGVDDPSLLDFSWSAFWIHILNVPFNYLTATVARQLGGIVGSVESVHG
        M SVW  H  TR E L  N+++I F + +EK R+L   PW F KSL+VL SP   + P  ++F++ AFWI I N+PF  ++  +A  LG  +G VE + G
Subjt:  MISVWNAHRDTRIEFLDDNVFIICFCTTTEKRRILQGSPWNFGKSLMVLVSPNGVDDPSLLDFSWSAFWIHILNVPFNYLTATVARQLGGIVGSVESVHG

Query:  EGLRDWLGSLIRVCVLIDVSRPLRQVLRLQLDEGKFCWCPIRYESLPDFCYRRGRIGHVSRECGVLDSEISSDFSHQFGDWLCVASLRTSPQYPLSAPSF
        +G   W G  IRV V IDVS+PLR+ ++L+  +GK  WCP+RYE LPDFCY  G+IGH  REC      ++++   Q+GDWL    L+ S  +P     F
Subjt:  EGLRDWLGSLIRVCVLIDVSRPLRQVLRLQLDEGKFCWCPIRYESLPDFCYRRGRIGHVSRECGVLDSEISSDFSHQFGDWLCVASLRTSPQYPLSAPSF

Query:  FTGGRGDRGRTV--GNDENEDW-----------GPVLDANTGVLDGAD-LPDEICTVNMAMGVGEASATQSLVAPKDVADQEI
        + GGR  RG  V  G     DW           GP       V +G D +P+E      ++   E +  Q+ +  + + +Q I
Subjt:  FTGGRGDRGRTV--GNDENEDW-----------GPVLDANTGVLDGAD-LPDEICTVNMAMGVGEASATQSLVAPKDVADQEI

A0A6J1DVS4 uncharacterized protein LOC1110235553.0e-3242.59Show/hide
Query:  MISVWNAHRDTRIEFLDDNVFIICFCTTTEKRRILQGSPWNFGKSLMVLVSPNGVDDPSLLDFSWSAFWIHILNVPFNYLTATVARQLGGIVGSVESVHG
        M  VW  H  TRIE    N+++I F T  EK R+    PW F KSL++LV     + P  +D S  AFW+ I  + F  +T  +A+ LG  +G VE V G
Subjt:  MISVWNAHRDTRIEFLDDNVFIICFCTTTEKRRILQGSPWNFGKSLMVLVSPNGVDDPSLLDFSWSAFWIHILNVPFNYLTATVARQLGGIVGSVESVHG

Query:  EGLRDWLGSLIRVCVLIDVSRPLRQVLRLQLDEGKFCWCPIRYESLPDFCYRRGRIGHVSRE
            DW+   + V V I+V +PLR+ L+++  +GK  WCP+RYE LPDFCY  G +GH  RE
Subjt:  EGLRDWLGSLIRVCVLIDVSRPLRQVLRLQLDEGKFCWCPIRYESLPDFCYRRGRIGHVSRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTCTGTTTGGAATGCGCACCGTGATACTCGAATTGAGTTCCTTGATGATAATGTGTTCATCATCTGTTTTTGTACGACGACTGAGAAAAGAAGGATTCTTCAGGG
GAGTCCTTGGAATTTTGGTAAGTCTTTAATGGTTTTAGTTTCCCCAAATGGTGTTGATGACCCCAGTCTTTTGGATTTTTCATGGTCGGCTTTCTGGATCCACATTCTGA
ATGTTCCTTTCAATTACCTTACCGCTACGGTGGCTCGACAGTTGGGGGGAATTGTGGGTTCTGTTGAGTCAGTTCATGGGGAAGGTTTAAGGGACTGGTTGGGCTCCTTA
ATTCGTGTTTGTGTTCTCATTGATGTCTCTCGACCTCTCCGCCAGGTGCTTCGTTTGCAGTTGGATGAAGGCAAATTCTGTTGGTGTCCTATTCGTTACGAGAGTCTCCC
AGATTTTTGCTACCGCCGTGGTCGAATTGGGCATGTTTCTCGTGAGTGTGGTGTTTTAGATTCTGAAATTTCTTCGGATTTTTCTCATCAGTTTGGGGATTGGCTGTGTG
TTGCTTCTCTGCGTACTAGTCCTCAGTATCCGCTTTCGGCGCCGAGTTTTTTTACTGGGGGTCGTGGGGATCGTGGTCGCACGGTAGGCAATGATGAGAATGAGGATTGG
GGTCCAGTGTTGGATGCGAATACTGGTGTTTTGGATGGAGCTGATCTTCCAGATGAAATCTGTACGGTTAATATGGCCATGGGTGTGGGGGAGGCATCCGCTACTCAAAG
TCTTGTTGCACCTAAGGATGTTGCTGATCAGGAAATTCCTGTTACAACTATGAAAACAAAAGGGAAGGAAATTGTACCTTCCATAAGTACCTCTGATGCTAAGAATGTCA
TGGGGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATCTCTGTTTGGAATGCGCACCGTGATACTCGAATTGAGTTCCTTGATGATAATGTGTTCATCATCTGTTTTTGTACGACGACTGAGAAAAGAAGGATTCTTCAGGG
GAGTCCTTGGAATTTTGGTAAGTCTTTAATGGTTTTAGTTTCCCCAAATGGTGTTGATGACCCCAGTCTTTTGGATTTTTCATGGTCGGCTTTCTGGATCCACATTCTGA
ATGTTCCTTTCAATTACCTTACCGCTACGGTGGCTCGACAGTTGGGGGGAATTGTGGGTTCTGTTGAGTCAGTTCATGGGGAAGGTTTAAGGGACTGGTTGGGCTCCTTA
ATTCGTGTTTGTGTTCTCATTGATGTCTCTCGACCTCTCCGCCAGGTGCTTCGTTTGCAGTTGGATGAAGGCAAATTCTGTTGGTGTCCTATTCGTTACGAGAGTCTCCC
AGATTTTTGCTACCGCCGTGGTCGAATTGGGCATGTTTCTCGTGAGTGTGGTGTTTTAGATTCTGAAATTTCTTCGGATTTTTCTCATCAGTTTGGGGATTGGCTGTGTG
TTGCTTCTCTGCGTACTAGTCCTCAGTATCCGCTTTCGGCGCCGAGTTTTTTTACTGGGGGTCGTGGGGATCGTGGTCGCACGGTAGGCAATGATGAGAATGAGGATTGG
GGTCCAGTGTTGGATGCGAATACTGGTGTTTTGGATGGAGCTGATCTTCCAGATGAAATCTGTACGGTTAATATGGCCATGGGTGTGGGGGAGGCATCCGCTACTCAAAG
TCTTGTTGCACCTAAGGATGTTGCTGATCAGGAAATTCCTGTTACAACTATGAAAACAAAAGGGAAGGAAATTGTACCTTCCATAAGTACCTCTGATGCTAAGAATGTCA
TGGGGGAATGA
Protein sequenceShow/hide protein sequence
MISVWNAHRDTRIEFLDDNVFIICFCTTTEKRRILQGSPWNFGKSLMVLVSPNGVDDPSLLDFSWSAFWIHILNVPFNYLTATVARQLGGIVGSVESVHGEGLRDWLGSL
IRVCVLIDVSRPLRQVLRLQLDEGKFCWCPIRYESLPDFCYRRGRIGHVSRECGVLDSEISSDFSHQFGDWLCVASLRTSPQYPLSAPSFFTGGRGDRGRTVGNDENEDW
GPVLDANTGVLDGADLPDEICTVNMAMGVGEASATQSLVAPKDVADQEIPVTTMKTKGKEIVPSISTSDAKNVMGE