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Lag0028695 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028695
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationchr8:28584064..28585134
RNA-Seq ExpressionLag0028695
SyntenyLag0028695
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]7.3e-3746.06Show/hide
Query:  QDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGSRY
        +D GGMGFR+ +IFNQAMLAKQSWRILR+P+SLLA+ LR +Y+K G +++A +G  PS  W++I+WGR+LF KGYRWKVG    I +  DP + R G+  
Subjt:  QDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGSRY

Query:  PIEVPEDLKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFT
        P+     ++   V  +M    +W+E+ +RE+F+  + + I++ PL +    DEIIW  +K G F+
Subjt:  PIEVPEDLKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFT

XP_024035599.1 uncharacterized protein LOC112096407 [Citrus clementina]2.7e-3139.2Show/hide
Query:  GGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGSRYPIE
        GG+GFR+ + FNQA+LAKQ WR+L+NP SL+A++++ RYYK+ D++ A VG +PS  W++I+WGR +  KG RW++G    I I     I R  +   I 
Subjt:  GGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGSRYPIE

Query:  VPEDLKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFTGKERDNLSCYVAMP
         P    G  V  ++   ++WNE +I ++F   D + I  I L     +DEIIW Y++KG ++ K    L+  +  P
Subjt:  VPEDLKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFTGKERDNLSCYVAMP

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]2.1e-3134.45Show/hide
Query:  GGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGSRYPIE
        GGMGFR+ + FNQA++AKQ WRI++ P+SL+AR+L+ RY+K   ++ A +G  PS  W++IVWGR +  KG RW++G   ++ +  +  I R  +  PI 
Subjt:  GGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGSRYPIE

Query:  VPEDLKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFTGKERDNLSCYVAMPNWEAV-----DIWDRMVENMSEQE
         P       V  ++   ++W E +I + F P D E I++IPL     +D++IW Y+KKG ++ K    ++  +  P   +      ++W R +  ++  E
Subjt:  VPEDLKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFTGKERDNLSCYVAMPNWEAV-----DIWDRMVENMSEQE

Query:  TNKIALILW
          K+ + LW
Subjt:  TNKIALILW

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]1.6e-3137.22Show/hide
Query:  GGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQD---PRINRQGSRY
        GG+GFRE + FNQA++AKQ+WR+L+ PNSL++R+L+ RY+++  ++ A  G N S  W++I+WGR +  KG RW++G    I I  D   PR       +
Subjt:  GGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQD---PRINRQGSRY

Query:  PIEVPEDLKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFTGKERDNLSCYVAMPN
        P+ +P      +V  ++    +W+E+ +R+ FL  D  +I+KIPL  + ++DE++W Y+K+GN++ K    L+     P+
Subjt:  PIEVPEDLKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFTGKERDNLSCYVAMPN

XP_030502375.1 uncharacterized protein LOC115717530 [Cannabis sativa]6.4e-3343.71Show/hide
Query:  KGQDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGS
        K +  GGMGFR    FNQA+LAKQ+WRI  NP+SLL+R+L+ RY+ +  +++AS+GH+PSLTW+ I W R L  KG RWKVG   HI  D DP I    +
Subjt:  KGQDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGS

Query:  RYPIEVPEDLKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFT
          P        G +V ++++  R+WN  I+ + F P DV+ I+ IPL     +D +IW ++  G +T
Subjt:  RYPIEVPEDLKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFT

TrEMBL top hitse value%identityAlignment
A0A6J1DRA0 uncharacterized protein LOC1110224233.6e-3746.06Show/hide
Query:  QDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGSRY
        +D GGMGFR+ +IFNQAMLAKQSWRILR+P+SLLA+ LR +Y+K G +++A +G  PS  W++I+WGR+LF KGYRWKVG    I +  DP + R G+  
Subjt:  QDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGSRY

Query:  PIEVPEDLKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFT
        P+     ++   V  +M    +W+E+ +RE+F+  + + I++ PL +    DEIIW  +K G F+
Subjt:  PIEVPEDLKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFT

A0A803P5U5 Uncharacterized protein1.6e-3436.7Show/hide
Query:  KGQDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGS
        K +  GGMGFR    FNQA+LAKQ+WR++ NPNSLL ++L+ +Y+    +++ASVGH+PSLTW+ I WGR L  +G RWK+     I    DP I+   +
Subjt:  KGQDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGS

Query:  RYPIEVPEDLKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFTGKERDNLSCYVAMPNWEAVDIWDRMVENMSEQE
          PI+      G +V +++T  ++WN  ++++ F P DVE I+ +PL    ++D++IW ++  G F        S   +M N    D    +    ++ E
Subjt:  RYPIEVPEDLKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFTGKERDNLSCYVAMPNWEAVDIWDRMVENMSEQE

Query:  TNKIALILWSIWSYRNKI
          ++   LW+IW+ RNK+
Subjt:  TNKIALILWSIWSYRNKI

A0A803PQ30 Uncharacterized protein3.1e-3343.71Show/hide
Query:  KGQDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGS
        K +  GGMGFR    FNQA+LAKQ+WRI  NP+SLL+R+L+ RY+ +  +++AS+GH+PSLTW+ I W R L  KG RWKVG   HI  D DP I    +
Subjt:  KGQDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGS

Query:  RYPIEVPEDLKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFT
          P        G +V ++++  R+WN  I+ + F P DV+ I+ IPL     +D +IW ++  G +T
Subjt:  RYPIEVPEDLKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFT

A0A803QEG9 Uncharacterized protein1.5e-3235.65Show/hide
Query:  KGQDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGS
        K +  GGMGFR    FNQA+LAKQ+WRI+  PNSLL+ +L+ +Y+    +++AS+GH+PSLTW+ I WGR L   G RWK+G    +    DP +    S
Subjt:  KGQDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGS

Query:  RYPIEVPEDLKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFTGKERDNLSCY-----VAMPNWEAVDIWDRMVEN
          PI       G +V +++T  R+WN  ++++ F P D+E I+ +PL    ++D++IW ++  GNFT +   +L+       ++  +  AV  W      
Subjt:  RYPIEVPEDLKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFTGKERDNLSCY-----VAMPNWEAVDIWDRMVEN

Query:  MSEQETNKIALILWSI
         S Q   K+ +  W +
Subjt:  MSEQETNKIALILWSI

A0A803QH07 Uncharacterized protein1.5e-3241.11Show/hide
Query:  KGQDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGS
        K +  GGMGFR    FNQA+LAKQ+WRI   P+SLL+R+L+ RY+    ++ AS+GH+PS TW++I WGR L  KG R+KVG  SHI   +DP I    S
Subjt:  KGQDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGS

Query:  RYPIEV--PEDLKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFTGKERDNLSCYV
          P+    P  L    V +++   R+WN  ++ + F P DVE I+ IPL    ++D +IW ++  G++  K   +L+ ++
Subjt:  RYPIEV--PEDLKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFTGKERDNLSCYV

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657508.5e-0429.89Show/hide
Query:  GGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYY----KDGDYIKASVGHNPSLTWKNIVWG-RNLFTKGYRWKVGTKSHI
        GG+G R     N+A+++K  WR+L+  NSL   +L+++Y+    +D  ++      + S TW++I  G R++ + G  W  G    I
Subjt:  GGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYY----KDGDYIKASVGHNPSLTWKNIVWG-RNLFTKGYRWKVGTKSHI

P93295 Uncharacterized mitochondrial protein AtMg003102.5e-1642.86Show/hide
Query:  QDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSH--IYIDQ
        +D GG+GFR+   FNQA+LAKQS+RI+  P++LL+R+LR RY+     ++ SVG  PS  W++I+ GR L ++G    +G   H  +++D+
Subjt:  QDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSH--IYIDQ

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein3.4e-1629.71Show/hide
Query:  GGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKS------HIYIDQDP-----R
        GG+GF++   FN A+L KQ WR+L  P SL+A++ + RY+   D + A +G  PS  WK+I   + +  +G R  VG         H ++D  P     R
Subjt:  GGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKS------HIYIDQDP-----R

Query:  INRQGSRYPIEVPEDLKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFTGK
        + R   +    V   LK  +   I    R+W + +I   F   + + I ++  G     D   W Y   G++T K
Subjt:  INRQGSRYPIEVPEDLKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFTGK

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.8e-1742.86Show/hide
Query:  QDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSH--IYIDQ
        +D GG+GFR+   FNQA+LAKQS+RI+  P++LL+R+LR RY+     ++ SVG  PS  W++I+ GR L ++G    +G   H  +++D+
Subjt:  QDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSH--IYIDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGACAGGATAGTGGAGGCATGGGATTTAGAGAGACAAACATCTTCAACCAAGCGATGCTCGCAAAACAAAGTTGGAGAATCCTAAGAAACCCGAATAGCCTCCT
AGCAAGAATTCTTAGGCGGCGTTATTACAAGGATGGAGACTACATAAAAGCCTCTGTGGGTCACAATCCTTCCCTGACGTGGAAAAACATAGTGTGGGGTAGGAACCTTT
TCACTAAAGGCTACAGGTGGAAAGTAGGAACAAAGAGTCATATATACATTGATCAAGACCCTCGGATCAATAGACAAGGTAGTAGATATCCTATTGAAGTTCCTGAAGAT
TTGAAAGGGAGGATAGTGAGGAGTATTATGACATATTTGAGAAAGTGGAACGAAGTGATCATTAGAGAAACGTTCTTACCTCGGGATGTTGAAGATATAATCAAAATTCC
TTTGGGAAACGACATGTCAAAGGATGAGATTATTTGGCCTTACAACAAAAAAGGGAACTTCACTGGAAAAGAAAGAGACAACCTCTCATGCTATGTGGCTATGCCAAATT
GGGAAGCTGTTGATATTTGGGATAGGATGGTGGAGAATATGTCAGAACAAGAAACAAATAAAATTGCACTAATCCTATGGAGCATTTGGTCTTATCGAAACAAAATCTAT
TTCAACATAATGAAAGCAAATCTGGAACAGCTAATCAGATCAATTCAAGCAACCATCGAAGAACATTTCAGAATTCAGGAGATTTACCTCAAGGACTCACAATCAGAGAG
CCACCGGAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGACAGGATAGTGGAGGCATGGGATTTAGAGAGACAAACATCTTCAACCAAGCGATGCTCGCAAAACAAAGTTGGAGAATCCTAAGAAACCCGAATAGCCTCCT
AGCAAGAATTCTTAGGCGGCGTTATTACAAGGATGGAGACTACATAAAAGCCTCTGTGGGTCACAATCCTTCCCTGACGTGGAAAAACATAGTGTGGGGTAGGAACCTTT
TCACTAAAGGCTACAGGTGGAAAGTAGGAACAAAGAGTCATATATACATTGATCAAGACCCTCGGATCAATAGACAAGGTAGTAGATATCCTATTGAAGTTCCTGAAGAT
TTGAAAGGGAGGATAGTGAGGAGTATTATGACATATTTGAGAAAGTGGAACGAAGTGATCATTAGAGAAACGTTCTTACCTCGGGATGTTGAAGATATAATCAAAATTCC
TTTGGGAAACGACATGTCAAAGGATGAGATTATTTGGCCTTACAACAAAAAAGGGAACTTCACTGGAAAAGAAAGAGACAACCTCTCATGCTATGTGGCTATGCCAAATT
GGGAAGCTGTTGATATTTGGGATAGGATGGTGGAGAATATGTCAGAACAAGAAACAAATAAAATTGCACTAATCCTATGGAGCATTTGGTCTTATCGAAACAAAATCTAT
TTCAACATAATGAAAGCAAATCTGGAACAGCTAATCAGATCAATTCAAGCAACCATCGAAGAACATTTCAGAATTCAGGAGATTTACCTCAAGGACTCACAATCAGAGAG
CCACCGGAGTTAG
Protein sequenceShow/hide protein sequence
MKGQDSGGMGFRETNIFNQAMLAKQSWRILRNPNSLLARILRRRYYKDGDYIKASVGHNPSLTWKNIVWGRNLFTKGYRWKVGTKSHIYIDQDPRINRQGSRYPIEVPED
LKGRIVRSIMTYLRKWNEVIIRETFLPRDVEDIIKIPLGNDMSKDEIIWPYNKKGNFTGKERDNLSCYVAMPNWEAVDIWDRMVENMSEQETNKIALILWSIWSYRNKIY
FNIMKANLEQLIRSIQATIEEHFRIQEIYLKDSQSESHRS