; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028707 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028707
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description60S ribosomal protein L36
Genome locationchr8:28956168..28960644
RNA-Seq ExpressionLag0028707
SyntenyLag0028707
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR000509 - Ribosomal protein L36e
IPR010448 - Torsin
IPR038097 - Ribosomal protein L36e domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3946989.1 hypothetical protein CMV_026816, partial [Castanea mollissima]1.8e-1780.6Show/hide
Query:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR
        + SKRVLFV+SLI EVAGFAPYEKRI E+LK+ KDK ALKV KRKLGT  RAKKK EEMSNVLRKMR
Subjt:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR

KAF8379516.1 hypothetical protein HHK36_028954 [Tetracentron sinense]1.4e-1777.14Show/hide
Query:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMRRFT
        + SKRV FVK+LI EVAGFAPYEKRI E+LK+ KDK ALKV KRKLGT  RAKKK EEMSNVLRKMR+F+
Subjt:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMRRFT

KAG6579388.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1780.6Show/hide
Query:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR
        + SKRVLFV+SLI EVAGFAPYEKRI E+LK+ KDK ALKV KRKLGT  RAKKK EEMSNVLRKMR
Subjt:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR

XP_011008474.1 PREDICTED: 60S ribosomal protein L36-2-like isoform X2 [Populus euphratica]1.8e-1780.6Show/hide
Query:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR
        + SKRVLFV+SLI EVAGFAPYEKRI E+LK+ KDK ALKV KRKLGT  RAKKK EEMSNVLRKMR
Subjt:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR

XP_021848281.1 60S ribosomal protein L36-1-like [Spinacia oleracea]1.8e-1780.6Show/hide
Query:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR
        + SKRVLFV+SLI EVAGFAPYEKRI E+LK+ KDK ALKV KRKLGT  RAKKK EEMSNVLRKMR
Subjt:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR

TrEMBL top hitse value%identityAlignment
A0A0K9RTR6 60S ribosomal protein L368.8e-1880.6Show/hide
Query:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR
        + SKRVLFV+SLI EVAGFAPYEKRI E+LK+ KDK ALKV KRKLGT  RAKKK EEMSNVLRKMR
Subjt:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR

A0A2K3LBD7 60S ribosomal protein L36 (Fragment)8.8e-1860.58Show/hide
Query:  GELNKKELAVGVESVKMSAGEL-NKKEL---------RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVL
        GE+  K+ + G+  V ++ G +  KKEL         + SKRV+FVK+LI EVAGFAPYEKRI E+LK+ KDK ALKV KRKLGT  RAKKK EEMSNVL
Subjt:  GELNKKELAVGVESVKMSAGEL-NKKEL---------RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVL

Query:  RKMR
        RKMR
Subjt:  RKMR

A0A4U5QH31 60S ribosomal protein L368.8e-1880.6Show/hide
Query:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR
        + SKRVLFV+SLI EVAGFAPYEKRI E+LK+ KDK ALKV KRKLGT  RAKKK EEMSNVLRKMR
Subjt:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR

A0A6J1IDA3 60S ribosomal protein L368.8e-1880.6Show/hide
Query:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR
        + SKRVLFV+SLI EVAGFAPYEKRI E+LK+ KDK ALKV KRKLGT  RAKKK EEMSNVLRKMR
Subjt:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR

A9PCN6 60S ribosomal protein L368.8e-1880.6Show/hide
Query:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR
        + SKRVLFV+SLI EVAGFAPYEKRI E+LK+ KDK ALKV KRKLGT  RAKKK EEMSNVLRKMR
Subjt:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR

SwissProt top hitse value%identityAlignment
O80929 60S ribosomal protein L36-16.5e-1866.67Show/hide
Query:  NKKELRISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR
        N ++ + SKR +F++ LI EVAG APYEKRI E+LK+ KDK ALKV KRKLGT  RAK+K EEMS+VLRKMR
Subjt:  NKKELRISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR

Q66KU4 60S ribosomal protein L362.2e-1355.88Show/hide
Query:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMRR
        R++K   FV+ +I EV GFAPYE+R  E+LK+ KDK ALK +K+++GT  RAK+K EE+SNVL  MR+
Subjt:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMRR

Q9LRB8 60S ribosomal protein L361.6e-1346.94Show/hide
Query:  ELAVGVE-----SVKMSAGELNKKELRISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMRRFTFG
        E+AVG+      + K      ++++  +S+RV  V++++ EVAG+APYE+R+ E+LK+ KDK ALK+ KRKLGT  R KKK EEM+ VLRKM+  + G
Subjt:  ELAVGVE-----SVKMSAGELNKKELRISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMRRFTFG

Q9LZ57 60S ribosomal protein L36-31.1e-1766.67Show/hide
Query:  NKKELRISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR
        N ++ + SKR +F+++LI EVAG APYEKRI E+LK+ KDK ALKV KRKLGT  RAK+K EEMS+VLRKMR
Subjt:  NKKELRISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR

Q9M352 60S ribosomal protein L36-23.2e-1770.15Show/hide
Query:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR
        + SKR +F+++LI EVAG APYEKRI E+LK+ KDK ALKV KRKLGT  RAK+K EEMS+VLRKMR
Subjt:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR

Arabidopsis top hitse value%identityAlignment
AT2G37600.1 Ribosomal protein L36e family protein4.6e-1966.67Show/hide
Query:  NKKELRISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR
        N ++ + SKR +F++ LI EVAG APYEKRI E+LK+ KDK ALKV KRKLGT  RAK+K EEMS+VLRKMR
Subjt:  NKKELRISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR

AT2G37600.2 Ribosomal protein L36e family protein4.6e-1966.67Show/hide
Query:  NKKELRISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR
        N ++ + SKR +F++ LI EVAG APYEKRI E+LK+ KDK ALKV KRKLGT  RAK+K EEMS+VLRKMR
Subjt:  NKKELRISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR

AT3G53740.2 Ribosomal protein L36e family protein2.3e-1870.15Show/hide
Query:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR
        + SKR +F+++LI EVAG APYEKRI E+LK+ KDK ALKV KRKLGT  RAK+K EEMS+VLRKMR
Subjt:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR

AT3G53740.3 Ribosomal protein L36e family protein2.3e-1870.15Show/hide
Query:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR
        + SKR +F+++LI EVAG APYEKRI E+LK+ KDK ALKV KRKLGT  RAK+K EEMS+VLRKMR
Subjt:  RISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR

AT5G02450.1 Ribosomal protein L36e family protein7.8e-1966.67Show/hide
Query:  NKKELRISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR
        N ++ + SKR +F+++LI EVAG APYEKRI E+LK+ KDK ALKV KRKLGT  RAK+K EEMS+VLRKMR
Subjt:  NKKELRISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTGTTTCTGCTCTGTTTACGGCTCCAAAAGTCCCCAAAAGAGTCCCTCCAAAAACCTAGCCGCAAAAGACATTATATTCTGTTTTTTTCGTCATAACGTCGAGAC
GCTGTCAAGACAGCGTCTCAACGCTGCCTTCAAAACGCGTGTTTCATATGCCCACATTGTGAAGAACTTCATAGTTCACTTTCTCCATACCAAAGTTCCCCTAATCCTAA
GTATTTGGGGAGGAAAGGGTCAAGGAAAATCATTTCATACCGAACTTATATTCCAGGCTATGGGAGTGGAATCAGTGAAAATGTCTGCTGGAGAGTTGAATAAAAAAGAG
TTGGCTGTGGGAGTGGAATCAGTGAAAATGTCTGCTGGAGAGTTGAATAAAAAAGAGTTGAGAATAAGTAAACGAGTTCTCTTTGTCAAGAGCTTGATCAACGAAGTTGC
TGGTTTTGCCCCATATGAGAAGAGAATCAATGAGGTTCTAAAAATTGAAAAAGACAAGTGTGCTCTGAAGGTAGTCAAGAGAAAGCTTGGAACTCAAAATAGAGCTAAGA
AGAAGCATGAGGAGATGTCCAACGTTCTAAGAAAGATGAGAAGGTTCACATTTGGATATGTTGTGAGTCGAAAGGTTATGAGGATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCTGTTTCTGCTCTGTTTACGGCTCCAAAAGTCCCCAAAAGAGTCCCTCCAAAAACCTAGCCGCAAAAGACATTATATTCTGTTTTTTTCGTCATAACGTCGAGAC
GCTGTCAAGACAGCGTCTCAACGCTGCCTTCAAAACGCGTGTTTCATATGCCCACATTGTGAAGAACTTCATAGTTCACTTTCTCCATACCAAAGTTCCCCTAATCCTAA
GTATTTGGGGAGGAAAGGGTCAAGGAAAATCATTTCATACCGAACTTATATTCCAGGCTATGGGAGTGGAATCAGTGAAAATGTCTGCTGGAGAGTTGAATAAAAAAGAG
TTGGCTGTGGGAGTGGAATCAGTGAAAATGTCTGCTGGAGAGTTGAATAAAAAAGAGTTGAGAATAAGTAAACGAGTTCTCTTTGTCAAGAGCTTGATCAACGAAGTTGC
TGGTTTTGCCCCATATGAGAAGAGAATCAATGAGGTTCTAAAAATTGAAAAAGACAAGTGTGCTCTGAAGGTAGTCAAGAGAAAGCTTGGAACTCAAAATAGAGCTAAGA
AGAAGCATGAGGAGATGTCCAACGTTCTAAGAAAGATGAGAAGGTTCACATTTGGATATGTTGTGAGTCGAAAGGTTATGAGGATGTAG
Protein sequenceShow/hide protein sequence
MLCFCSVYGSKSPQKSPSKNLAAKDIIFCFFRHNVETLSRQRLNAAFKTRVSYAHIVKNFIVHFLHTKVPLILSIWGGKGQGKSFHTELIFQAMGVESVKMSAGELNKKE
LAVGVESVKMSAGELNKKELRISKRVLFVKSLINEVAGFAPYEKRINEVLKIEKDKCALKVVKRKLGTQNRAKKKHEEMSNVLRKMRRFTFGYVVSRKVMRM