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Lag0028713 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028713
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTranslocase subunit seca
Genome locationchr8:29144658..29145275
RNA-Seq ExpressionLag0028713
SyntenyLag0028713
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601783.1 hypothetical protein SDJN03_07016, partial [Cucurbita argyrosperma subsp. sororia]1.6e-6175Show/hide
Query:  MKQVAVQQNAFSVCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSR
        M QVAVQ+N FSV EEM+   AA TDRRERLVCPKPRR+GL+N  VND NPFRHRFDS+AANDALDLLF KGG   ENFNSS T  ASSPPY CG+PPSR
Subjt:  MKQVAVQQNAFSVCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSR

Query:  VSNPLIQDARFGDEKPKLLPLFS-----PPSSPPSSGGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNRRIPALA
        V+NPLIQDARFG+EKPK+LP+FS     PP SPP S  R GG VR NFG+ PAVRIEGFDCRLDRE RNR IPALA
Subjt:  VSNPLIQDARFGDEKPKLLPLFS-----PPSSPPSSGGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNRRIPALA

KAG7032498.1 hypothetical protein SDJN02_06547 [Cucurbita argyrosperma subsp. argyrosperma]3.3e-6275.57Show/hide
Query:  MKQVAVQQNAFSVCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSR
        M QVAVQ+N FSV EEM+   AA TDRRERLVCPKPRR+GL+N  VND NPFRHRFDS+AANDALDLLF KGG   ENFNSSST  ASSPPY CG+PPSR
Subjt:  MKQVAVQQNAFSVCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSR

Query:  VSNPLIQDARFGDEKPKLLPLFS-----PPSSPPSSGGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNRRIPALA
        V+NPLIQDARFG+EKPK+LP+FS     PP SPP S  R GG VR NFG+ PAVRIEGFDCRLDRE RNR IPALA
Subjt:  VSNPLIQDARFGDEKPKLLPLFS-----PPSSPPSSGGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNRRIPALA

XP_022923501.1 uncharacterized protein LOC111431174 [Cucurbita moschata]1.1e-6276.14Show/hide
Query:  MKQVAVQQNAFSVCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSR
        M QVAVQ+N FSV EEM    AA TDRRERLVCPKPRR+GL+N  VND NPFRHRFDS+AANDALDLLFFKGG   ENFNSSST  ASSPPY CG+PPSR
Subjt:  MKQVAVQQNAFSVCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSR

Query:  VSNPLIQDARFGDEKPKLLPLFS-----PPSSPPSSGGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNRRIPALA
        V+NPLIQDARFG+EKPK+LP+FS     PP SPP S  R GG VR NFG+ PAVRIEGFDCRLDRE RNR IPALA
Subjt:  VSNPLIQDARFGDEKPKLLPLFS-----PPSSPPSSGGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNRRIPALA

XP_022971782.1 uncharacterized protein LOC111470460 [Cucurbita maxima]2.5e-6276.14Show/hide
Query:  MKQVAVQQNAFSVCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSR
        M QVAVQ+N FSV EEM+   AA TDRRERLVCPKPRR+GL+NA  ND NPFRHRFDSIAANDALDLLFFKGG   ENF SSST  ASSPPY CG+PPSR
Subjt:  MKQVAVQQNAFSVCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSR

Query:  VSNPLIQDARFGDEKPKLLPLFS-----PPSSPPSSGGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNRRIPALA
        V+NPLIQDARFG+EKPK+LP+FS     PP SPP S  R GG VR NFG+ PAVRIEGFDCRLDRE RNR IPALA
Subjt:  VSNPLIQDARFGDEKPKLLPLFS-----PPSSPPSSGGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNRRIPALA

XP_038906747.1 uncharacterized protein LOC120092671 [Benincasa hispida]1.5e-6280.37Show/hide
Query:  VCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVSNPLIQDARFG
        VCEEM++AA    DRRERLVCPKPRR+GL+N   ND NPFRHRFDS    DALDLLFFKGG G ENFNSSST  ASSPPYFCGSPPSRV+NPLIQDARFG
Subjt:  VCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVSNPLIQDARFG

Query:  DEKPKLLPLF----SPPSSPPSSGGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNRRIPALA
        DEKPKLLPLF    SPPSSPP S GRKGGCVR+NFG+NPAVRIEGFDCRLDRE RNR +PALA
Subjt:  DEKPKLLPLF----SPPSSPPSSGGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNRRIPALA

TrEMBL top hitse value%identityAlignment
A0A0A0KRF1 Uncharacterized protein6.7e-6179.14Show/hide
Query:  VCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVSNPLIQDARFG
        VCEEM     AATDRRER+VCPKPRR+GL+N   ND NPFRHRFDS    DALDLLF KGG G ENFNSS+   ASSPPYFCGSPPSRV+NPLIQDARFG
Subjt:  VCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVSNPLIQDARFG

Query:  DEKPKLLPLF----SPPSSPPSSGGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNRRIPALA
        DEKPKLLPLF    SPP SPP S GRKGGCVRVNFG NPAVRIEGFDCRLDRE RNR IPALA
Subjt:  DEKPKLLPLF----SPPSSPPSSGGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNRRIPALA

A0A1S3CR46 uncharacterized protein LOC1035033852.5e-6078.53Show/hide
Query:  VCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVSNPLIQDARFG
        VCEEM S   AATDRRER+VCPKPRR+GL+N   ND NPFRHRFDS    DA+DLLF KGG G E FNSS+T  ASS PYFCGSPPSRV+NPLIQDARFG
Subjt:  VCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVSNPLIQDARFG

Query:  DEKPKLLPLF----SPPSSPPSSGGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNRRIPALA
        DEKPKLLPLF    SPP SPP S GRKGGCVRVNFG+NPAVRIEGFDCRLDRE RNR IPALA
Subjt:  DEKPKLLPLF----SPPSSPPSSGGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNRRIPALA

A0A5D3C147 Uncharacterized protein1.1e-5879.22Show/hide
Query:  AAATDRRERLVCPKPRRVGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVSNPLIQDARFGDEKPKLLPL
        +AATDRRER+VCPKPRR+GL+N   ND NPFRHRFDS    DA+DLLF KGG G E FNSS+T  ASS PYFCGSPPSRV+NPLIQDARFGDEKPKLLPL
Subjt:  AAATDRRERLVCPKPRRVGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVSNPLIQDARFGDEKPKLLPL

Query:  F----SPPSSPPSSGGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNRRIPALA
        F    SPP SPP S GRKGGCVRVNFG+NPAVRIEGFDCRLDRE RNR IPALA
Subjt:  F----SPPSSPPSSGGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNRRIPALA

A0A6J1E6Z2 uncharacterized protein LOC1114311745.5e-6376.14Show/hide
Query:  MKQVAVQQNAFSVCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSR
        M QVAVQ+N FSV EEM    AA TDRRERLVCPKPRR+GL+N  VND NPFRHRFDS+AANDALDLLFFKGG   ENFNSSST  ASSPPY CG+PPSR
Subjt:  MKQVAVQQNAFSVCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSR

Query:  VSNPLIQDARFGDEKPKLLPLFS-----PPSSPPSSGGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNRRIPALA
        V+NPLIQDARFG+EKPK+LP+FS     PP SPP S  R GG VR NFG+ PAVRIEGFDCRLDRE RNR IPALA
Subjt:  VSNPLIQDARFGDEKPKLLPLFS-----PPSSPPSSGGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNRRIPALA

A0A6J1I2X1 uncharacterized protein LOC1114704601.2e-6276.14Show/hide
Query:  MKQVAVQQNAFSVCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSR
        M QVAVQ+N FSV EEM+   AA TDRRERLVCPKPRR+GL+NA  ND NPFRHRFDSIAANDALDLLFFKGG   ENF SSST  ASSPPY CG+PPSR
Subjt:  MKQVAVQQNAFSVCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSR

Query:  VSNPLIQDARFGDEKPKLLPLFS-----PPSSPPSSGGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNRRIPALA
        V+NPLIQDARFG+EKPK+LP+FS     PP SPP S  R GG VR NFG+ PAVRIEGFDCRLDRE RNR IPALA
Subjt:  VSNPLIQDARFGDEKPKLLPLFS-----PPSSPPSSGGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNRRIPALA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13390.1 unknown protein4.1e-2642.7Show/hide
Query:  MMKQVAVQQNAFSVCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVN-----DHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSSTASSPP-YFCG
        MM    +QQNAF    E +   AA +DRR+ ++CPKPRRVG +N   +       N      +S + ++ LD +  KGG G    + + T  +PP +F G
Subjt:  MMKQVAVQQNAFSVCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVN-----DHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSSTASSPP-YFCG

Query:  SPPSRVSNPLIQDARFGDEKPKLLPLFSP-PSSP------PSSGGRKGGCV--RVNFGDNPAVRIEGFDCRLDRESRNRRIPALA
        SPPSRVSNPL +D+ F +E   LL + SP PS+P      P S  R G CV    +FG+NP VR+ GFDC  DR S NR I  LA
Subjt:  SPPSRVSNPLIQDARFGDEKPKLLPLFSP-PSSP------PSSGGRKGGCV--RVNFGDNPAVRIEGFDCRLDRESRNRRIPALA

AT1G13390.2 unknown protein4.1e-2642.7Show/hide
Query:  MMKQVAVQQNAFSVCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVN-----DHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSSTASSPP-YFCG
        MM    +QQNAF    E +   AA +DRR+ ++CPKPRRVG +N   +       N      +S + ++ LD +  KGG G    + + T  +PP +F G
Subjt:  MMKQVAVQQNAFSVCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVN-----DHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSSTASSPP-YFCG

Query:  SPPSRVSNPLIQDARFGDEKPKLLPLFSP-PSSP------PSSGGRKGGCV--RVNFGDNPAVRIEGFDCRLDRESRNRRIPALA
        SPPSRVSNPL +D+ F +E   LL + SP PS+P      P S  R G CV    +FG+NP VR+ GFDC  DR S NR I  LA
Subjt:  SPPSRVSNPLIQDARFGDEKPKLLPLFSP-PSSP------PSSGGRKGGCV--RVNFGDNPAVRIEGFDCRLDRESRNRRIPALA

AT1G68490.1 unknown protein4.3e-3650Show/hide
Query:  MKQVAVQQNAFSVCEEMLSAAAAATDR-RERLVCPKPRRVGLVNAPVNDHNP-------FRHRF---DSIAANDALDLLFFKGGYGSENFNSSSTASSPP
        M   AVQ NAF+   ++ S++ +  +R +  +VCPKPRR+GL N   N H+P       F H+    +S A  D LD++  K GYG+E  N     S  P
Subjt:  MKQVAVQQNAFSVCEEMLSAAAAATDR-RERLVCPKPRRVGLVNAPVNDHNP-------FRHRF---DSIAANDALDLLFFKGGYGSENFNSSSTASSPP

Query:  YFCGSPPSRVSNPLIQDARFGDE--------KPKL-LPLFSPPSSPPSSGGRKGGC-VRVNFGDNPAVRIEGFDCRLDRESRNRRIPALA
        + CGSPPSRV+NPL QDARF DE         P+L LP   P SSP SS GRKGGC VR NFG++P VR+EGFDC LDR+SRN  IPALA
Subjt:  YFCGSPPSRVSNPLIQDARFGDE--------KPKL-LPLFSPPSSPPSSGGRKGGC-VRVNFGDNPAVRIEGFDCRLDRESRNRRIPALA

AT3G02555.1 unknown protein3.8e-2443.6Show/hide
Query:  MKQVAVQQNAFSVCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSSTASSPPYFCGSPPSRVS
        M   ++QQNAF   EE        +   + +VCPKPRR        N   PFR  F    A+D  D    +          S ++ SPP+F GSPPSR +
Subjt:  MKQVAVQQNAFSVCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSSTASSPPYFCGSPPSRVS

Query:  NPLIQDARFGDEKPKLLPLFSPPSSP--PSSGGRKGGCVRVNFGDNPA-VRIEGFDCRLDRESRNRRIPALA
        NPL QDARFGDEK   L   SP  SP  PS+   K GC R+ FG  PA VR+EGFDC L+R+  N  IPA+A
Subjt:  NPLIQDARFGDEKPKLLPLFSPPSSP--PSSGGRKGGCVRVNFGDNPA-VRIEGFDCRLDRESRNRRIPALA

AT5G16110.1 unknown protein2.0e-2544.68Show/hide
Query:  MKQVAVQQNAFSVCEEMLSAAAAATDRRERLVCPKPRRVGL----VNAPVNDH--NPFRHRFDSIAANDALDLLFFKGGYGSENFNSSSTASSPPYFCGS
        M    +QQNAF   EEM+       DR++ +VCPKPRRVGL    V  P+  H         DS A  + L+++  K   G+        +SSPPYF GS
Subjt:  MKQVAVQQNAFSVCEEMLSAAAAATDRRERLVCPKPRRVGL----VNAPVNDH--NPFRHRFDSIAANDALDLLFFKGGYGSENFNSSSTASSPPYFCGS

Query:  PPSRVSNPLIQDARFGDEK--------PKLLPL----FSPPSSPPSSGGRKGGCVRVNFG-DNPAVRIEGFDCRLDRESRNRRIPALA
        PPSR +NPL QDARF DEK        P L P     F  PSS  SS   + GCVR+ FG ++PAVR+EGFDC L+R+ +N  IPA+A
Subjt:  PPSRVSNPLIQDARFGDEK--------PKLLPL----FSPPSSPPSSGGRKGGCVRVNFG-DNPAVRIEGFDCRLDRESRNRRIPALA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAGCAGGTGGCGGTTCAACAGAACGCGTTTTCAGTTTGTGAAGAGATGCTGAGCGCCGCCGCCGCCGCCACCGACCGCCGTGAACGGCTGGTTTGCCCAAAACC
CCGCCGTGTTGGACTCGTTAACGCCCCCGTCAACGACCACAACCCATTTAGACACCGTTTTGATTCCATAGCTGCCAACGATGCTCTGGATCTCCTCTTCTTTAAGGGTG
GTTATGGATCGGAGAATTTTAACAGTAGTAGTACAGCCTCGTCGCCGCCGTATTTTTGTGGGTCGCCGCCGAGCAGAGTATCTAACCCATTAATCCAAGACGCTCGATTT
GGGGACGAGAAGCCAAAGCTGCTCCCCCTCTTCTCCCCTCCGTCGTCGCCACCGTCCTCGGGCGGTCGGAAGGGCGGCTGTGTTCGCGTGAATTTCGGTGACAATCCCGC
TGTGAGGATTGAGGGTTTCGATTGCCGCCTGGACAGGGAGAGTCGAAACCGCAGAATCCCTGCCCTGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGAAGCAGGTGGCGGTTCAACAGAACGCGTTTTCAGTTTGTGAAGAGATGCTGAGCGCCGCCGCCGCCGCCACCGACCGCCGTGAACGGCTGGTTTGCCCAAAACC
CCGCCGTGTTGGACTCGTTAACGCCCCCGTCAACGACCACAACCCATTTAGACACCGTTTTGATTCCATAGCTGCCAACGATGCTCTGGATCTCCTCTTCTTTAAGGGTG
GTTATGGATCGGAGAATTTTAACAGTAGTAGTACAGCCTCGTCGCCGCCGTATTTTTGTGGGTCGCCGCCGAGCAGAGTATCTAACCCATTAATCCAAGACGCTCGATTT
GGGGACGAGAAGCCAAAGCTGCTCCCCCTCTTCTCCCCTCCGTCGTCGCCACCGTCCTCGGGCGGTCGGAAGGGCGGCTGTGTTCGCGTGAATTTCGGTGACAATCCCGC
TGTGAGGATTGAGGGTTTCGATTGCCGCCTGGACAGGGAGAGTCGAAACCGCAGAATCCCTGCCCTGGCTTAG
Protein sequenceShow/hide protein sequence
MMKQVAVQQNAFSVCEEMLSAAAAATDRRERLVCPKPRRVGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSSTASSPPYFCGSPPSRVSNPLIQDARF
GDEKPKLLPLFSPPSSPPSSGGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNRRIPALA