; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028723 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028723
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 4-like
Genome locationchr8:29330400..29331701
RNA-Seq ExpressionLag0028723
SyntenyLag0028723
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061274.1 uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]1.9e-6951.85Show/hide
Query:  CEDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNGHTQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDINISYDKAWRGRELALTAIRG
        C+D +C WY+RAS      +W+VRKF D H C VD+VKN H QAT+W+V EC K   K+NDK  CRP DVINYM+  H +NISYDKAWRGRE+AL +IRG
Subjt:  CEDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNGHTQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDINISYDKAWRGRELALTAIRG

Query:  SPKASFALIPTFSTALIEKNSGTYTAFVVDDQGRFRYFFMCLSASIHAWKYCFPVMSVD--------------------------------DSKNDASWT
        +P+ S+A++  FS ALI  N GTYTA   DD+GRF+++FM L+ASI AW YC  V+SVD                                DS+N  SW+
Subjt:  SPKASFALIPTFSTALIEKNSGTYTAFVVDDQGRFRYFFMCLSASIHAWKYCFPVMSVD--------------------------------DSKNDASWT

Query:  WFFRNLKVALGEHKELVIVSDGHFSIPNGVRNSYDSVEHGICA
        WFFRNLK   GEH E+VIVSD H SI NG    Y+  EHG+CA
Subjt:  WFFRNLKVALGEHKELVIVSDGHFSIPNGVRNSYDSVEHGICA

KAA0067552.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]1.4e-6751.03Show/hide
Query:  CEDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNGHTQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDINISYDKAWRGRELALTAIRG
        C+D +C WY+RAS      +W++RKF D H C VD+VKN H QAT+W+V EC K   K NDK  CRP DVINYM+  H +NISYDKAWRGRE+AL +I+G
Subjt:  CEDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNGHTQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDINISYDKAWRGRELALTAIRG

Query:  SPKASFALIPTFSTALIEKNSGTYTAFVVDDQGRFRYFFMCLSASIHAWKYCFPVMSVD--------------------------------DSKNDASWT
        +P+ S+A++  FS ALI  N GTYTA   DD+GRF+++FM L ASI AW Y  PV+SVD                                DS+ND SW+
Subjt:  SPKASFALIPTFSTALIEKNSGTYTAFVVDDQGRFRYFFMCLSASIHAWKYCFPVMSVD--------------------------------DSKNDASWT

Query:  WFFRNLKVALGEHKELVIVSDGHFSIPNGVRNSYDSVEHGICA
        WFFRNLK    EH E+VIVSD H SI NG    Y+  EHG+CA
Subjt:  WFFRNLKVALGEHKELVIVSDGHFSIPNGVRNSYDSVEHGICA

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]4.5e-7152.67Show/hide
Query:  CEDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNGHTQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDINISYDKAWRGRELALTAIRG
        C+D +C WY+RAS      +W+VRKF D H C VD+VKN H QAT+W+V EC K   K NDK  CRP DVINYM+  H +NISYDKAWRGRE+AL +IRG
Subjt:  CEDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNGHTQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDINISYDKAWRGRELALTAIRG

Query:  SPKASFALIPTFSTALIEKNSGTYTAFVVDDQGRFRYFFMCLSASIHAWKYCFPVMSVD--------------------------------DSKNDASWT
        +P+ S+A++  FS ALI  N GTYTA   DD+GRF+++FM L+ASI AW YC PV+SVD                                DS+ND SW+
Subjt:  SPKASFALIPTFSTALIEKNSGTYTAFVVDDQGRFRYFFMCLSASIHAWKYCFPVMSVD--------------------------------DSKNDASWT

Query:  WFFRNLKVALGEHKELVIVSDGHFSIPNGVRNSYDSVEHGICA
        WFFRNLK   GEH E+VIVSD H SI NG    Y+  EHG+CA
Subjt:  WFFRNLKVALGEHKELVIVSDGHFSIPNGVRNSYDSVEHGICA

XP_008455803.1 PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]4.2e-6951.44Show/hide
Query:  CEDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNGHTQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDINISYDKAWRGRELALTAIRG
        C+D +C WY+RAS      +W+VRKF+  H C VD+VKN H QAT+W+V EC K   K NDKV CRP DVINYM+  H +NISYDKAW GRE+AL +IRG
Subjt:  CEDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNGHTQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDINISYDKAWRGRELALTAIRG

Query:  SPKASFALIPTFSTALIEKNSGTYTAFVVDDQGRFRYFFMCLSASIHAWKYCFPVMSVD--------------------------------DSKNDASWT
        +P+ S+A++  FS ALI  N GTYTA   DD+GRF+++FM L+ASI AW YC PV+SVD                                DS+ND SW+
Subjt:  SPKASFALIPTFSTALIEKNSGTYTAFVVDDQGRFRYFFMCLSASIHAWKYCFPVMSVD--------------------------------DSKNDASWT

Query:  WFFRNLKVALGEHKELVIVSDGHFSIPNGVRNSYDSVEHGICA
        WFFRNLK   GEH E++IVSD + SI NG    Y+  EHG+CA
Subjt:  WFFRNLKVALGEHKELVIVSDGHFSIPNGVRNSYDSVEHGICA

XP_016901440.1 PREDICTED: uncharacterized protein LOC107991253 [Cucumis melo]7.0e-7253.09Show/hide
Query:  CEDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNGHTQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDINISYDKAWRGRELALTAIRG
        C+D AC WY+RAS      +W+VRKF D H C VD+VKN H QAT+W+V EC     K+NDK  CRP DVINYM+  HD+N+SYDKAWRGRE+AL +IRG
Subjt:  CEDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNGHTQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDINISYDKAWRGRELALTAIRG

Query:  SPKASFALIPTFSTALIEKNSGTYTAFVVDDQGRFRYFFMCLSASIHAWKYCFPVMSVD--------------------------------DSKNDASWT
        +PK S+ ++ TFS ALI  N GTYTA   DD+GRF+++FM L+ SI AW YC PV+SVD                                DS+ND SW+
Subjt:  SPKASFALIPTFSTALIEKNSGTYTAFVVDDQGRFRYFFMCLSASIHAWKYCFPVMSVD--------------------------------DSKNDASWT

Query:  WFFRNLKVALGEHKELVIVSDGHFSIPNGVRNSYDSVEHGICA
        WFFRNLKV  GEH E+VIVSD H SI NG    Y+  EHG+CA
Subjt:  WFFRNLKVALGEHKELVIVSDGHFSIPNGVRNSYDSVEHGICA

TrEMBL top hitse value%identityAlignment
A0A1S3C300 uncharacterized protein LOC1034958992.0e-6951.44Show/hide
Query:  CEDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNGHTQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDINISYDKAWRGRELALTAIRG
        C+D +C WY+RAS      +W+VRKF+  H C VD+VKN H QAT+W+V EC K   K NDKV CRP DVINYM+  H +NISYDKAW GRE+AL +IRG
Subjt:  CEDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNGHTQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDINISYDKAWRGRELALTAIRG

Query:  SPKASFALIPTFSTALIEKNSGTYTAFVVDDQGRFRYFFMCLSASIHAWKYCFPVMSVD--------------------------------DSKNDASWT
        +P+ S+A++  FS ALI  N GTYTA   DD+GRF+++FM L+ASI AW YC PV+SVD                                DS+ND SW+
Subjt:  SPKASFALIPTFSTALIEKNSGTYTAFVVDDQGRFRYFFMCLSASIHAWKYCFPVMSVD--------------------------------DSKNDASWT

Query:  WFFRNLKVALGEHKELVIVSDGHFSIPNGVRNSYDSVEHGICA
        WFFRNLK   GEH E++IVSD + SI NG    Y+  EHG+CA
Subjt:  WFFRNLKVALGEHKELVIVSDGHFSIPNGVRNSYDSVEHGICA

A0A1S4E0D5 uncharacterized protein LOC1079912533.4e-7253.09Show/hide
Query:  CEDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNGHTQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDINISYDKAWRGRELALTAIRG
        C+D AC WY+RAS      +W+VRKF D H C VD+VKN H QAT+W+V EC     K+NDK  CRP DVINYM+  HD+N+SYDKAWRGRE+AL +IRG
Subjt:  CEDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNGHTQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDINISYDKAWRGRELALTAIRG

Query:  SPKASFALIPTFSTALIEKNSGTYTAFVVDDQGRFRYFFMCLSASIHAWKYCFPVMSVD--------------------------------DSKNDASWT
        +PK S+ ++ TFS ALI  N GTYTA   DD+GRF+++FM L+ SI AW YC PV+SVD                                DS+ND SW+
Subjt:  SPKASFALIPTFSTALIEKNSGTYTAFVVDDQGRFRYFFMCLSASIHAWKYCFPVMSVD--------------------------------DSKNDASWT

Query:  WFFRNLKVALGEHKELVIVSDGHFSIPNGVRNSYDSVEHGICA
        WFFRNLKV  GEH E+VIVSD H SI NG    Y+  EHG+CA
Subjt:  WFFRNLKVALGEHKELVIVSDGHFSIPNGVRNSYDSVEHGICA

A0A5A7V1Z6 CCHC-type domain-containing protein9.2e-7051.85Show/hide
Query:  CEDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNGHTQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDINISYDKAWRGRELALTAIRG
        C+D +C WY+RAS      +W+VRKF D H C VD+VKN H QAT+W+V EC K   K+NDK  CRP DVINYM+  H +NISYDKAWRGRE+AL +IRG
Subjt:  CEDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNGHTQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDINISYDKAWRGRELALTAIRG

Query:  SPKASFALIPTFSTALIEKNSGTYTAFVVDDQGRFRYFFMCLSASIHAWKYCFPVMSVD--------------------------------DSKNDASWT
        +P+ S+A++  FS ALI  N GTYTA   DD+GRF+++FM L+ASI AW YC  V+SVD                                DS+N  SW+
Subjt:  SPKASFALIPTFSTALIEKNSGTYTAFVVDDQGRFRYFFMCLSASIHAWKYCFPVMSVD--------------------------------DSKNDASWT

Query:  WFFRNLKVALGEHKELVIVSDGHFSIPNGVRNSYDSVEHGICA
        WFFRNLK   GEH E+VIVSD H SI NG    Y+  EHG+CA
Subjt:  WFFRNLKVALGEHKELVIVSDGHFSIPNGVRNSYDSVEHGICA

A0A5A7VGR4 Protein FAR1-RELATED SEQUENCE 2-like6.6e-6851.03Show/hide
Query:  CEDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNGHTQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDINISYDKAWRGRELALTAIRG
        C+D +C WY+RAS      +W++RKF D H C VD+VKN H QAT+W+V EC K   K NDK  CRP DVINYM+  H +NISYDKAWRGRE+AL +I+G
Subjt:  CEDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNGHTQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDINISYDKAWRGRELALTAIRG

Query:  SPKASFALIPTFSTALIEKNSGTYTAFVVDDQGRFRYFFMCLSASIHAWKYCFPVMSVD--------------------------------DSKNDASWT
        +P+ S+A++  FS ALI  N GTYTA   DD+GRF+++FM L ASI AW Y  PV+SVD                                DS+ND SW+
Subjt:  SPKASFALIPTFSTALIEKNSGTYTAFVVDDQGRFRYFFMCLSASIHAWKYCFPVMSVD--------------------------------DSKNDASWT

Query:  WFFRNLKVALGEHKELVIVSDGHFSIPNGVRNSYDSVEHGICA
        WFFRNLK    EH E+VIVSD H SI NG    Y+  EHG+CA
Subjt:  WFFRNLKVALGEHKELVIVSDGHFSIPNGVRNSYDSVEHGICA

A0A5D3E198 MuDRA-like transposase2.2e-7152.67Show/hide
Query:  CEDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNGHTQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDINISYDKAWRGRELALTAIRG
        C+D +C WY+RAS      +W+VRKF D H C VD+VKN H QAT+W+V EC K   K NDK  CRP DVINYM+  H +NISYDKAWRGRE+AL +IRG
Subjt:  CEDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNGHTQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDINISYDKAWRGRELALTAIRG

Query:  SPKASFALIPTFSTALIEKNSGTYTAFVVDDQGRFRYFFMCLSASIHAWKYCFPVMSVD--------------------------------DSKNDASWT
        +P+ S+A++  FS ALI  N GTYTA   DD+GRF+++FM L+ASI AW YC PV+SVD                                DS+ND SW+
Subjt:  SPKASFALIPTFSTALIEKNSGTYTAFVVDDQGRFRYFFMCLSASIHAWKYCFPVMSVD--------------------------------DSKNDASWT

Query:  WFFRNLKVALGEHKELVIVSDGHFSIPNGVRNSYDSVEHGICA
        WFFRNLK   GEH E+VIVSD H SI NG    Y+  EHG+CA
Subjt:  WFFRNLKVALGEHKELVIVSDGHFSIPNGVRNSYDSVEHGICA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCACTCGGTTAACCATGTACAAGAATGGTATCAACAAGTCTAACATAATCCAGATCACTGGCGACAGGGATGTTACATGGTTCATGTCCAACATTGGTGATGGGAT
GGTTAGCGACATATGCGTTGTTGTTGACCACTGCGAGGACGTTGCATGTTGTTGGTACATCCGGGCGTCTCGTCATTTGGATGGGGGTTTGTGGATGGTTCGCAAGTTCG
TGGATAGACACGAATGCCCTGTTGATATTGTAAAAAATGGCCACACGCAAGCCACAGCATGGCTCGTGGGGGAGTGTGTGAAGTCATTTCTAAAAGTAAATGACAAGGTC
CAGTGTCGCCCGCGTGATGTTATTAACTATATGAGGAGGAAACATGACATCAACATCAGTTATGACAAGGCTTGGAGGGGGCGGGAGCTTGCACTTACTGCCATCAGAGG
TTCGCCTAAAGCGTCGTTTGCACTAATTCCAACATTCTCTACTGCTCTGATCGAGAAAAACTCAGGCACATACACTGCTTTTGTTGTTGACGACCAGGGCAGGTTCAGGT
ATTTCTTCATGTGTCTCTCTGCGTCTATACATGCATGGAAATATTGTTTTCCTGTCATGTCTGTTGATGACTCAAAGAATGACGCTTCATGGACGTGGTTTTTCCGTAAC
TTGAAAGTTGCGTTAGGTGAGCATAAGGAGTTAGTTATCGTATCGGATGGGCACTTTAGCATACCAAATGGCGTTAGGAATAGCTATGATTCTGTGGAGCATGGTATTTG
TGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCACTCGGTTAACCATGTACAAGAATGGTATCAACAAGTCTAACATAATCCAGATCACTGGCGACAGGGATGTTACATGGTTCATGTCCAACATTGGTGATGGGAT
GGTTAGCGACATATGCGTTGTTGTTGACCACTGCGAGGACGTTGCATGTTGTTGGTACATCCGGGCGTCTCGTCATTTGGATGGGGGTTTGTGGATGGTTCGCAAGTTCG
TGGATAGACACGAATGCCCTGTTGATATTGTAAAAAATGGCCACACGCAAGCCACAGCATGGCTCGTGGGGGAGTGTGTGAAGTCATTTCTAAAAGTAAATGACAAGGTC
CAGTGTCGCCCGCGTGATGTTATTAACTATATGAGGAGGAAACATGACATCAACATCAGTTATGACAAGGCTTGGAGGGGGCGGGAGCTTGCACTTACTGCCATCAGAGG
TTCGCCTAAAGCGTCGTTTGCACTAATTCCAACATTCTCTACTGCTCTGATCGAGAAAAACTCAGGCACATACACTGCTTTTGTTGTTGACGACCAGGGCAGGTTCAGGT
ATTTCTTCATGTGTCTCTCTGCGTCTATACATGCATGGAAATATTGTTTTCCTGTCATGTCTGTTGATGACTCAAAGAATGACGCTTCATGGACGTGGTTTTTCCGTAAC
TTGAAAGTTGCGTTAGGTGAGCATAAGGAGTTAGTTATCGTATCGGATGGGCACTTTAGCATACCAAATGGCGTTAGGAATAGCTATGATTCTGTGGAGCATGGTATTTG
TGCCTGA
Protein sequenceShow/hide protein sequence
MITRLTMYKNGINKSNIIQITGDRDVTWFMSNIGDGMVSDICVVVDHCEDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNGHTQATAWLVGECVKSFLKVNDKV
QCRPRDVINYMRRKHDINISYDKAWRGRELALTAIRGSPKASFALIPTFSTALIEKNSGTYTAFVVDDQGRFRYFFMCLSASIHAWKYCFPVMSVDDSKNDASWTWFFRN
LKVALGEHKELVIVSDGHFSIPNGVRNSYDSVEHGICA