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Lag0028746 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028746
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRegulator of chromosome condensation (RCC1) family protein
Genome locationchr8:29785537..29790931
RNA-Seq ExpressionLag0028746
SyntenyLag0028746
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022133945.1 probable E3 ubiquitin-protein ligase HERC2 [Momordica charantia]7.3e-0457.89Show/hide
Query:  VKAEGKLYMWGNAKDSQLGIPSLPDQDLLPSKCGLMDQ
        + AEGKLYMWGNAKDSQLG+P LP+    P +   +D+
Subjt:  VKAEGKLYMWGNAKDSQLGIPSLPDQDLLPSKCGLMDQ
TrEMBL top hitse value%identityAlignment
A0A6J1BWN2 probable E3 ubiquitin-protein ligase HERC23.5e-0457.89Show/hide
Query:  VKAEGKLYMWGNAKDSQLGIPSLPDQDLLPSKCGLMDQ
        + AEGKLYMWGNAKDSQLG+P LP+    P +   +D+
Subjt:  VKAEGKLYMWGNAKDSQLGIPSLPDQDLLPSKCGLMDQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G60870.1 Regulator of chromosome condensation (RCC1) family protein3.5e-0447.06Show/hide
Query:  GKLYMWGNAKDSQLGIPSLPDQDLLPSKCGLMDQ
        G+L+MWGNAKD QLG+P LP+    P +   + +
Subjt:  GKLYMWGNAKDSQLGIPSLPDQDLLPSKCGLMDQ
AT5G60870.2 Regulator of chromosome condensation (RCC1) family protein4.1e-0542.5Show/hide
Query:  WIVKAEGKLYMWGNAKDSQLGIPSLPDQDLLPSKCGLMDQ
        W +   G+L+MWGNAKD QLG+P LP+    P +   + +
Subjt:  WIVKAEGKLYMWGNAKDSQLGIPSLPDQDLLPSKCGLMDQ
AT5G60870.3 Regulator of chromosome condensation (RCC1) family protein3.5e-0447.06Show/hide
Query:  GKLYMWGNAKDSQLGIPSLPDQDLLPSKCGLMDQ
        G+L+MWGNAKD QLG+P LP+    P +   + +
Subjt:  GKLYMWGNAKDSQLGIPSLPDQDLLPSKCGLMDQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATTGGCTACATATCACCAGACATACTGGAGACTTTCATTGTGTACAATGAGCGAAGAAGGGTCACATCTTCAGCTAAAAGGAAAAGAAAGCATGTCGGTGTGTCC
TTACACAAGGTGTGGAAGATGTAAATTAGAGAATGTGAAGACGCTGATGAGTTGCTTTTGGATTGTGAAAGCTGAGGGCAAATTGTACATGTGGGGAAATGCTAAGGATT
CTCAATTGGGTATTCCTAGCCTGCCAGATCAAGATCTGCTACCTTCAAAATGTGGACTGATGGATCAAGTTCTAGTATATAACCTAAATGGTCTAAAGTATAGGGATAAG
GTCGGGTACCTTATCCCTGGTGACACTATGGATGCGACCTACTTTGCGAACAAGGGAAATGATGTGATCCTTGATCGTTCATGTAGAGACATGCGAGTAGGGGCATCCTA
TGTAAAAGATGTTTACACAAGACCGGACCAAGAAATAAGTCACTCTTACTTTATACCATCGTTTACTGTTAAGACTGACTATTTCATGCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGATATTGGCTACATATCACCAGACATACTGGAGACTTTCATTGTGTACAATGAGCGAAGAAGGGTCACATCTTCAGCTAAAAGGAAAAGAAAGCATGTCGGTGTGTCC
TTACACAAGGTGTGGAAGATGTAAATTAGAGAATGTGAAGACGCTGATGAGTTGCTTTTGGATTGTGAAAGCTGAGGGCAAATTGTACATGTGGGGAAATGCTAAGGATT
CTCAATTGGGTATTCCTAGCCTGCCAGATCAAGATCTGCTACCTTCAAAATGTGGACTGATGGATCAAGTTCTAGTATATAACCTAAATGGTCTAAAGTATAGGGATAAG
GTCGGGTACCTTATCCCTGGTGACACTATGGATGCGACCTACTTTGCGAACAAGGGAAATGATGTGATCCTTGATCGTTCATGTAGAGACATGCGAGTAGGGGCATCCTA
TGTAAAAGATGTTTACACAAGACCGGACCAAGAAATAAGTCACTCTTACTTTATACCATCGTTTACTGTTAAGACTGACTATTTCATGCGATGA
Protein sequenceShow/hide protein sequence
MILATYHQTYWRLSLCTMSEEGSHLQLKGKESMSVCPYTRCGRCKLENVKTLMSCFWIVKAEGKLYMWGNAKDSQLGIPSLPDQDLLPSKCGLMDQVLVYNLNGLKYRDK
VGYLIPGDTMDATYFANKGNDVILDRSCRDMRVGASYVKDVYTRPDQEISHSYFIPSFTVKTDYFMR