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Lag0028749 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028749
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionconserved peptide upstream open reading frame 53
Genome locationchr8:29835375..29835740
RNA-Seq ExpressionLag0028749
SyntenyLag0028749
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2664121.1 hypothetical protein I3760_16G064500 [Carya illinoinensis]2.3e-1969.32Show/hide
Query:  MSAGFHLAVIGALLQLSLSSSS--SSSFLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
        MSAGF L +IGALL+L L S++  S+ F    CCM+LC F+Q LNLV+ SVSMRLRPKRTCSGVKCFGAFHIKRF F L LF RGG T
Subjt:  MSAGFHLAVIGALLQLSLSSSS--SSSFLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
KAG6579195.1 hypothetical protein SDJN03_23643, partial [Cucurbita argyrosperma subsp. sororia]7.1e-2988.51Show/hide
Query:  MSAGFHLAVIGALLQLSLSSSSSSSFLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRF-SFLLLLFRRGGFT
        MSAGF LAVIGALLQL  SSSSSS  L LSCCMILC FKQSLNLVFPSVSMR RPKRTCSGVKCFGAFHIKRF SF+LLLFRRGGFT
Subjt:  MSAGFHLAVIGALLQLSLSSSSSSSFLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRF-SFLLLLFRRGGFT
KAG6626895.1 hypothetical protein CIPAW_15G084200 [Carya illinoinensis]9.0e-1667.44Show/hide
Query:  MSAGFHLAVIGALLQLS-LSSSSSSSFLALSCC--MILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRG
        MSA F+L +IGALLQL  L+ S+ S+  AL  C  M LC F+Q LNLV  SVSMRLR KRTCSGVKCFGAFHIKRFSFL L  R G
Subjt:  MSAGFHLAVIGALLQLS-LSSSSSSSFLALSCC--MILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRG
KAG6672509.1 hypothetical protein I3842_16G060900 [Carya illinoinensis]5.1e-1969.32Show/hide
Query:  MSAGFHLAVIGALLQLSLSS--SSSSSFLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
        MSAGF L +IGALL+L L S  + S+ F    CCM+LC F+Q LNLV+ SVSMRLRPKRTCSGVKCFGAFHIKRF F L LF RGG T
Subjt:  MSAGFHLAVIGALLQLSLSS--SSSSSFLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
KGN45959.1 hypothetical protein Csa_005610 [Cucumis sativus]2.2e-2276.74Show/hide
Query:  MSAGFHLAVIGALLQLSLSSSSSSSFLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
        MSAGF LAVIGALLQL  S          S  +IL SFKQSLNL+F SVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFR+GGFT
Subjt:  MSAGFHLAVIGALLQLSLSSSSSSSFLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
TrEMBL top hitse value%identityAlignment
A0A0A0KAV1 Uncharacterized protein1.1e-2276.74Show/hide
Query:  MSAGFHLAVIGALLQLSLSSSSSSSFLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
        MSAGF LAVIGALLQL  S          S  +IL SFKQSLNL+F SVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFR+GGFT
Subjt:  MSAGFHLAVIGALLQLSLSSSSSSSFLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
A0A2H5P3Q3 Uncharacterized protein4.3e-1664.77Show/hide
Query:  MSAGFHLAVIGALLQLSLSSSSSSSFLALS--CCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
        MSA F LA+IGA L+L +SSSS S  L +S   CM+LC F+QSLNL   SVSMRLR KRTC GVKCFG FHIK+  F L LF RG FT
Subjt:  MSAGFHLAVIGALLQLSLSSSSSSSFLALS--CCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
A0A314XMT5 Uncharacterized protein1.7e-1567.82Show/hide
Query:  MSAGFHLAVIGALLQL-SLSSSSSSSFLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
        MSA F LAVIGALL+L  L+SSS S++LA+ C M+LC F Q LN V  SVSM LRPKRTCSG++ FGAFHIKRFSF L LF RG  T
Subjt:  MSAGFHLAVIGALLQL-SLSSSSSSSFLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
A0A6J5TMY7 Uncharacterized protein1.7e-1565.12Show/hide
Query:  MSAGFHLAVIGALLQLSLSSSSSSSFLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
        MSA F LAVIGALL+L + +SSS S     C M+LC F+Q LN V  SVSM LRPKRTCSG++ FGAFHIKRFSF L LF RG  T
Subjt:  MSAGFHLAVIGALLQLSLSSSSSSSFLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
A0A6J5W1Y9 Uncharacterized protein1.7e-1565.12Show/hide
Query:  MSAGFHLAVIGALLQLSLSSSSSSSFLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
        MSA F LAVIGALL+L + +SSS S     C M+LC F+Q LN V  SVSM LRPKRTCSG++ FGAFHIKRFSF L LF RG  T
Subjt:  MSAGFHLAVIGALLQLSLSSSSSSSFLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G25472.1 conserved peptide upstream open reading frame 544.0e-0650.7Show/hide
Query:  LAVIGALLQLSLSSSSSSSFLALSCCMIL-----CSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKR
        L +I   +Q S SSSSS  F  LS   +L     CS +Q L L  PS+SM LR KRTCSGV+ FG FH K+
Subjt:  LAVIGALLQLSLSSSSSSSFLALSCCMIL-----CSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKR
AT1G68552.1 conserved peptide upstream open reading frame 531.1e-1152.33Show/hide
Query:  MSAGFHLAVIGALLQLS--LSSSSSSSFLALSCCMI----LCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIK--RFSFLLL
        MSAGF   VI +L+ +S  +SSSSS S  +L  C++     C  KQ L L  PS+SMRLRPKRTCS V+ FG FHIK  +FSF ++
Subjt:  MSAGFHLAVIGALLQLS--LSSSSSSSFLALSCCMI----LCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIK--RFSFLLL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCTGGGTTTCACTTGGCTGTGATTGGGGCTCTGTTGCAGCTCTCTCTTTCTTCTTCTTCTTCCTCCTCTTTCTTGGCTCTCTCTTGCTGTATGATTCTCTGCTC
TTTCAAGCAGAGCCTCAATCTGGTGTTCCCATCTGTTTCGATGCGTTTGAGACCGAAGAGGACTTGTTCTGGAGTGAAGTGCTTTGGAGCTTTTCATATAAAACGATTCT
CATTCCTTCTTTTGCTCTTCAGAAGAGGGGGTTTCACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCTGGGTTTCACTTGGCTGTGATTGGGGCTCTGTTGCAGCTCTCTCTTTCTTCTTCTTCTTCCTCCTCTTTCTTGGCTCTCTCTTGCTGTATGATTCTCTGCTC
TTTCAAGCAGAGCCTCAATCTGGTGTTCCCATCTGTTTCGATGCGTTTGAGACCGAAGAGGACTTGTTCTGGAGTGAAGTGCTTTGGAGCTTTTCATATAAAACGATTCT
CATTCCTTCTTTTGCTCTTCAGAAGAGGGGGTTTCACTTAA
Protein sequenceShow/hide protein sequence
MSAGFHLAVIGALLQLSLSSSSSSSFLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT