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Lag0028759 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028759
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:30127561..30128205
RNA-Seq ExpressionLag0028759
SyntenyLag0028759
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG66222.1 hypothetical protein EZV62_007497 [Acer yangbiense]2.0e-1230.81Show/hide
Query:  MASGPWTFDWSLIVLMEPVGASPMLFVEFNECFFWVQIHNVLMHWQTRKMEVFLGNKIGRLVEVPESEDNEWTRPVLRIRVGLKLDRPLRRGFKLQNR--
        ++ GPW+F+ +LIV+ EP G   ++ ++F +  FW+QIHNV M   T+ +  FLG  +G +VEV E +   +T   LR+RV L++D+PLRR  ++     
Subjt:  MASGPWTFDWSLIVLMEPVGASPMLFVEFNECFFWVQIHNVLMHWQTRKMEVFLGNKIGRLVEVPESEDNEWTRPVLRIRVGLKLDRPLRRGFKLQNR--

Query:  ------------------------HSRKECGHEIPDDVPGVKDK--YGEWMRAGMLSGDLGKRGGE-ERRDGPNAD---GEKGSG
                                HS K+C  +      G+K+   +G WMR    +  +G  G + E R G  ++     KG+G
Subjt:  ------------------------HSRKECGHEIPDDVPGVKDK--YGEWMRAGMLSGDLGKRGGE-ERRDGPNAD---GEKGSG

TXG72521.1 hypothetical protein EZV62_001100 [Acer yangbiense]2.9e-1139.56Show/hide
Query:  MASGPWTFDWSLIVLMEPVGASPMLFVEFNECFFWVQIHNVLMHWQTRKMEVFLGNKIGRLVEVPESEDNEWTRPVLRIRVGLKLDRPLRR
        MA GPW+F+ +LIV++EP G   +  ++FN+  FW+QI N L+   T ++  FLG+ +G +V+   S+   +    LR++V L++D+PLRR
Subjt:  MASGPWTFDWSLIVLMEPVGASPMLFVEFNECFFWVQIHNVLMHWQTRKMEVFLGNKIGRLVEVPESEDNEWTRPVLRIRVGLKLDRPLRR

TXG73522.1 hypothetical protein EZV62_002101 [Acer yangbiense]4.5e-1240Show/hide
Query:  MASGPWTFDWSLIVLMEPVGASPMLFVEFNECFFWVQIHNVLMHWQTRKMEVFLGNKIGRLVEVPESEDNEWTRPVLRIRVGLKLDRPLRRGFKL
        ++ GPW FD +L+VL EP G S +  +EFN   FWVQIHN+ +   + ++ +FLGN IG +  V        +   +R+RVG+K+D PL+R  ++
Subjt:  MASGPWTFDWSLIVLMEPVGASPMLFVEFNECFFWVQIHNVLMHWQTRKMEVFLGNKIGRLVEVPESEDNEWTRPVLRIRVGLKLDRPLRRGFKL

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]7.5e-1530.85Show/hide
Query:  MASGPWTFDWSLIVLMEPVGASPMLFVEFNECFFWVQIHNVLMHWQTRKMEVFLGNKIGRLVEVPESEDNEWTRPVLRIRVGLKLDRPLRRGFKLQNR--
        ++SGPWTF+ SL+VL  P   +  L + FN C FW+QIHN+     + +M   LG K+G + E+     + W  P +R+RV + + +PLRRG KL+N   
Subjt:  MASGPWTFDWSLIVLMEPVGASPMLFVEFNECFFWVQIHNVLMHWQTRKMEVFLGNKIGRLVEVPESEDNEWTRPVLRIRVGLKLDRPLRRGFKLQNR--

Query:  -----------------------HSRKECGHEIPDDVPGVKDKYGEWMRAGMLSGDLGK-------RGGEERRDGPNADGEKGSGSER
                               HS +EC            ++YG+W+RA +L   +         RGG   R      G  G G  R
Subjt:  -----------------------HSRKECGHEIPDDVPGVKDKYGEWMRAGMLSGDLGK-------RGGEERRDGPNADGEKGSGSER

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]7.0e-1340.86Show/hide
Query:  GPWTFDWSLIVLMEPVGASPMLFVEFNECFFWVQIHNVLMHWQTRKMEVFLGNKIGRLVEVPESEDNEWTRPVLRIRVGLKLDRPLRRGFKLQ
        GPWTFD SL++L+    A+  L ++ + C FWVQIH +     T+ M  FLG ++G + EV      +W RP L +RV + + +PLRRG K++
Subjt:  GPWTFDWSLIVLMEPVGASPMLFVEFNECFFWVQIHNVLMHWQTRKMEVFLGNKIGRLVEVPESEDNEWTRPVLRIRVGLKLDRPLRRGFKLQ

TrEMBL top hitse value%identityAlignment
A0A5C7IBW4 CCHC-type domain-containing protein9.9e-1330.81Show/hide
Query:  MASGPWTFDWSLIVLMEPVGASPMLFVEFNECFFWVQIHNVLMHWQTRKMEVFLGNKIGRLVEVPESEDNEWTRPVLRIRVGLKLDRPLRRGFKLQNR--
        ++ GPW+F+ +LIV+ EP G   ++ ++F +  FW+QIHNV M   T+ +  FLG  +G +VEV E +   +T   LR+RV L++D+PLRR  ++     
Subjt:  MASGPWTFDWSLIVLMEPVGASPMLFVEFNECFFWVQIHNVLMHWQTRKMEVFLGNKIGRLVEVPESEDNEWTRPVLRIRVGLKLDRPLRRGFKLQNR--

Query:  ------------------------HSRKECGHEIPDDVPGVKDK--YGEWMRAGMLSGDLGKRGGE-ERRDGPNAD---GEKGSG
                                HS K+C  +      G+K+   +G WMR    +  +G  G + E R G  ++     KG+G
Subjt:  ------------------------HSRKECGHEIPDDVPGVKDK--YGEWMRAGMLSGDLGKRGGE-ERRDGPNAD---GEKGSG

A0A5C7ICE5 CCHC-type domain-containing protein1.4e-1128.8Show/hide
Query:  MASGPWTFDWSLIVLMEPVGASPMLFVEFNECFFWVQIHNVLMHWQTRKMEVFLGNKIGRLVEVPESEDNEWTRPVLRIRVGLKLDRPLRRGFKLQNR--
        ++ GPWTFD  L+VL +P G   ++ + FN   FW+QI N  +   T++M  F+G+ IG L ++      E     +R++V + + +PL+R  +L+    
Subjt:  MASGPWTFDWSLIVLMEPVGASPMLFVEFNECFFWVQIHNVLMHWQTRKMEVFLGNKIGRLVEVPESEDNEWTRPVLRIRVGLKLDRPLRRGFKLQNR--

Query:  -----------------------HSRKECGHEIPDDVPGVKD-KYGEWMRAGMLSGDLGKRGGEERRDGPNADGEKGSGSERGEAPVRGVG
                               HS ++CG    +D+ G KD +YG WMRA                D P  +   GS   RGE    G G
Subjt:  -----------------------HSRKECGHEIPDDVPGVKD-KYGEWMRAGMLSGDLGKRGGEERRDGPNADGEKGSGSERGEAPVRGVG

A0A5C7IY45 CCHC-type domain-containing protein2.2e-1240Show/hide
Query:  MASGPWTFDWSLIVLMEPVGASPMLFVEFNECFFWVQIHNVLMHWQTRKMEVFLGNKIGRLVEVPESEDNEWTRPVLRIRVGLKLDRPLRRGFKL
        ++ GPW FD +L+VL EP G S +  +EFN   FWVQIHN+ +   + ++ +FLGN IG +  V        +   +R+RVG+K+D PL+R  ++
Subjt:  MASGPWTFDWSLIVLMEPVGASPMLFVEFNECFFWVQIHNVLMHWQTRKMEVFLGNKIGRLVEVPESEDNEWTRPVLRIRVGLKLDRPLRRGFKL

A0A6J1D765 uncharacterized protein LOC1110179023.6e-1530.85Show/hide
Query:  MASGPWTFDWSLIVLMEPVGASPMLFVEFNECFFWVQIHNVLMHWQTRKMEVFLGNKIGRLVEVPESEDNEWTRPVLRIRVGLKLDRPLRRGFKLQNR--
        ++SGPWTF+ SL+VL  P   +  L + FN C FW+QIHN+     + +M   LG K+G + E+     + W  P +R+RV + + +PLRRG KL+N   
Subjt:  MASGPWTFDWSLIVLMEPVGASPMLFVEFNECFFWVQIHNVLMHWQTRKMEVFLGNKIGRLVEVPESEDNEWTRPVLRIRVGLKLDRPLRRGFKLQNR--

Query:  -----------------------HSRKECGHEIPDDVPGVKDKYGEWMRAGMLSGDLGK-------RGGEERRDGPNADGEKGSGSER
                               HS +EC            ++YG+W+RA +L   +         RGG   R      G  G G  R
Subjt:  -----------------------HSRKECGHEIPDDVPGVKDKYGEWMRAGMLSGDLGK-------RGGEERRDGPNADGEKGSGSER

A0A6J1DVS4 uncharacterized protein LOC1110235553.4e-1340.86Show/hide
Query:  GPWTFDWSLIVLMEPVGASPMLFVEFNECFFWVQIHNVLMHWQTRKMEVFLGNKIGRLVEVPESEDNEWTRPVLRIRVGLKLDRPLRRGFKLQ
        GPWTFD SL++L+    A+  L ++ + C FWVQIH +     T+ M  FLG ++G + EV      +W RP L +RV + + +PLRRG K++
Subjt:  GPWTFDWSLIVLMEPVGASPMLFVEFNECFFWVQIHNVLMHWQTRKMEVFLGNKIGRLVEVPESEDNEWTRPVLRIRVGLKLDRPLRRGFKLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGGGTCCGTGGACCTTCGATTGGTCGCTGATTGTGTTGATGGAACCAGTTGGAGCGTCTCCAATGTTGTTCGTTGAGTTTAATGAATGTTTTTTTTGGGTGCA
GATTCATAATGTTCTTATGCATTGGCAAACCAGGAAAATGGAGGTCTTTCTGGGTAACAAGATTGGTCGTCTGGTGGAAGTGCCTGAGTCGGAAGATAATGAATGGACGA
GGCCAGTGTTGAGGATCAGAGTTGGTTTGAAGCTAGACCGACCTCTTCGACGGGGATTCAAACTCCAAAACAGGCATTCGAGGAAGGAGTGTGGGCATGAGATTCCAGAT
GATGTGCCCGGGGTCAAGGACAAGTATGGGGAGTGGATGAGAGCGGGGATGTTGTCTGGGGATTTGGGTAAGAGAGGTGGGGAGGAAAGGAGAGATGGACCTAACGCTGA
TGGTGAGAAGGGGAGTGGGAGTGAGAGAGGAGAAGCCCCTGTCCGGGGGGTTGGGTCGGGGGAAGAGGGCCAGTCAGATACTGTAGTTTGGGTTGGGGGTGTGGCTGATA
TGGGTGTTGTGGAGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCGGGTCCGTGGACCTTCGATTGGTCGCTGATTGTGTTGATGGAACCAGTTGGAGCGTCTCCAATGTTGTTCGTTGAGTTTAATGAATGTTTTTTTTGGGTGCA
GATTCATAATGTTCTTATGCATTGGCAAACCAGGAAAATGGAGGTCTTTCTGGGTAACAAGATTGGTCGTCTGGTGGAAGTGCCTGAGTCGGAAGATAATGAATGGACGA
GGCCAGTGTTGAGGATCAGAGTTGGTTTGAAGCTAGACCGACCTCTTCGACGGGGATTCAAACTCCAAAACAGGCATTCGAGGAAGGAGTGTGGGCATGAGATTCCAGAT
GATGTGCCCGGGGTCAAGGACAAGTATGGGGAGTGGATGAGAGCGGGGATGTTGTCTGGGGATTTGGGTAAGAGAGGTGGGGAGGAAAGGAGAGATGGACCTAACGCTGA
TGGTGAGAAGGGGAGTGGGAGTGAGAGAGGAGAAGCCCCTGTCCGGGGGGTTGGGTCGGGGGAAGAGGGCCAGTCAGATACTGTAGTTTGGGTTGGGGGTGTGGCTGATA
TGGGTGTTGTGGAGGCTTAG
Protein sequenceShow/hide protein sequence
MASGPWTFDWSLIVLMEPVGASPMLFVEFNECFFWVQIHNVLMHWQTRKMEVFLGNKIGRLVEVPESEDNEWTRPVLRIRVGLKLDRPLRRGFKLQNRHSRKECGHEIPD
DVPGVKDKYGEWMRAGMLSGDLGKRGGEERRDGPNADGEKGSGSERGEAPVRGVGSGEEGQSDTVVWVGGVADMGVVEA