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Lag0028767 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028767
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPol-like polyprotein/retrotransposon
Genome locationchr8:30314252..30315468
RNA-Seq ExpressionLag0028767
SyntenyLag0028767
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7802225.1 cytochrome p450 [Senna tora]2.6e-0828.76Show/hide
Query:  MPSFMSPVKNDVEKFDGRMNFTLWQVQVKDVLIQSELHKALKRR-SASDGASERLSGDSVPWSPMVVPVEEDSTL-VASN--------------WKKKKD
        M  F S VK DVEKFDGR+NF LWQVQVKDVLIQS LHKAL+ + S+ D      S     W  + +       L +A N              WKK + 
Subjt:  MPSFMSPVKNDVEKFDGRMNFTLWQVQVKDVLIQSELHKALKRR-SASDGASERLSGDSVPWSPMVVPVEEDSTL-VASN--------------WKKKKD

Query:  FEQKKG-------------------------------------------------------------------------------SWECEQSGHMKKDFP
          Q KG                                                                                W+C +SGH+KK+ P
Subjt:  FEQKKG-------------------------------------------------------------------------------SWECEQSGHMKKDFP

Query:  NRVGSSKDSGLDVDVVSLVRGDSEFL
             +  S LD   VSLVRG+ +FL
Subjt:  NRVGSSKDSGLDVDVVSLVRGDSEFL

KAF7823890.1 cytochrome p450 [Senna tora]6.2e-1037.09Show/hide
Query:  MPSFMSPVKNDVEKFDGRMNFTLWQVQVKDVLIQSELHKALKRR-SASDGASERLSGDSVPWSPM----------------VVPVEEDSTLVASNWKKKK
        M  F S VK D+EKFDGR+NF  W+VQVKDVLIQS LHKAL+ + S+ D      S     W  +                +  V+E ST     WKK +
Subjt:  MPSFMSPVKNDVEKFDGRMNFTLWQVQVKDVLIQSELHKALKRR-SASDGASERLSGDSVPWSPM----------------VVPVEEDSTLVASNWKKKK

Query:  DFEQKKGSWE---CEQSGHMKKDFPNRVGSSKDSGLDVDVVSLVRGDSEFL
           Q KG       ++  H  +   +   S   S LD   VSL+RG+ +FL
Subjt:  DFEQKKGSWE---CEQSGHMKKDFPNRVGSSKDSGLDVDVVSLVRGDSEFL

PON66942.1 Pol-like polyprotein/retrotransposon [Trema orientale]2.0e-0858.06Show/hide
Query:  FMSPVKNDVEKFDGRMNFTLWQVQVKDVLIQSELHKALKRRSASDGA-SERLSGDSVPWSPM
        F +PV+ DVEKFDG +NF LWQ+QVKD+LIQS LHKALK R A  G  SE+ S     W  +
Subjt:  FMSPVKNDVEKFDGRMNFTLWQVQVKDVLIQSELHKALKRRSASDGA-SERLSGDSVPWSPM

XP_022139673.1 uncharacterized protein LOC111010521 [Momordica charantia]3.5e-1376.67Show/hide
Query:  MPSFMSPVKNDVEKFDGRMNFTLWQVQVKDVLIQSELHKALKRRSASDGASERLSGDSVP
        M  FMSPVK DVEKFDG +NF LWQVQVKDVLIQSELHKALK R  S+GASE+LS D  P
Subjt:  MPSFMSPVKNDVEKFDGRMNFTLWQVQVKDVLIQSELHKALKRRSASDGASERLSGDSVP

XP_022154929.1 uncharacterized protein LOC111022075 [Momordica charantia]1.6e-1073.21Show/hide
Query:  MSPVKNDVEKFDGRMNFTLWQVQVKDVLIQSELHKALKRRSASDGASERLSGDSVP
        MSPVK DVEKFD  +NF LWQVQVKDV+IQS LHKALK R + D ASE+LSGD  P
Subjt:  MSPVKNDVEKFDGRMNFTLWQVQVKDVLIQSELHKALKRRSASDGASERLSGDSVP

TrEMBL top hitse value%identityAlignment
A0A2P5D0W5 Pol-like polyprotein/retrotransposon9.7e-0958.06Show/hide
Query:  FMSPVKNDVEKFDGRMNFTLWQVQVKDVLIQSELHKALKRRSASDGA-SERLSGDSVPWSPM
        F +PV+ DVEKFDG +NF LWQ+QVKD+LIQS LHKALK R A  G  SE+ S     W  +
Subjt:  FMSPVKNDVEKFDGRMNFTLWQVQVKDVLIQSELHKALKRRSASDGA-SERLSGDSVPWSPM

A0A445CNJ8 Uncharacterized protein2.8e-0864.15Show/hide
Query:  MPSFMSPVKNDVEKFDGRMNFTLWQVQVKDVLIQSELHKALKRRSASDGASER
        M  + S VK ++EKFDGR+NF LWQVQVKDVLIQS LHKALK + +S    ER
Subjt:  MPSFMSPVKNDVEKFDGRMNFTLWQVQVKDVLIQSELHKALKRRSASDGASER

A0A445D4M9 Uncharacterized protein6.3e-0866.67Show/hide
Query:  MPSFMSPVKNDVEKFDGRMNFTLWQVQVKDVLIQSELHKALKRRSASD
        M  + S VK ++EKFDGR+NF LWQVQVKDVLIQS LHKALK + + D
Subjt:  MPSFMSPVKNDVEKFDGRMNFTLWQVQVKDVLIQSELHKALKRRSASD

A0A6J1CG82 uncharacterized protein LOC1110105211.7e-1376.67Show/hide
Query:  MPSFMSPVKNDVEKFDGRMNFTLWQVQVKDVLIQSELHKALKRRSASDGASERLSGDSVP
        M  FMSPVK DVEKFDG +NF LWQVQVKDVLIQSELHKALK R  S+GASE+LS D  P
Subjt:  MPSFMSPVKNDVEKFDGRMNFTLWQVQVKDVLIQSELHKALKRRSASDGASERLSGDSVP

A0A6J1DNQ5 uncharacterized protein LOC1110220757.9e-1173.21Show/hide
Query:  MSPVKNDVEKFDGRMNFTLWQVQVKDVLIQSELHKALKRRSASDGASERLSGDSVP
        MSPVK DVEKFD  +NF LWQVQVKDV+IQS LHKALK R + D ASE+LSGD  P
Subjt:  MSPVKNDVEKFDGRMNFTLWQVQVKDVLIQSELHKALKRRSASDGASERLSGDSVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAGCTTCATGAGTCCAGTGAAGAATGACGTGGAGAAATTTGATGGAAGGATGAACTTCACCTTGTGGCAAGTGCAAGTCAAGGATGTGCTGATACAATCCGAGTT
ACACAAGGCTTTGAAGAGAAGATCAGCAAGCGATGGTGCTTCCGAAAGATTAAGCGGTGATAGTGTCCCATGGAGTCCAATGGTGGTTCCAGTAGAGGAGGATTCAACAC
TAGTAGCTAGCAATTGGAAGAAGAAGAAAGATTTCGAGCAGAAGAAAGGTTCCTGGGAATGCGAACAATCTGGACACATGAAAAAGGATTTTCCTAACAGAGTAGGTTCG
TCAAAGGACTCTGGGTTGGATGTTGATGTTGTCTCTCTCGTCAGGGGAGATAGTGAATTCCTCCAAAGAAGGACAGAGTTCATCCTCATGGTATGTCTGCTTTACCATGA
TAGAGGATGTGATGTCAACGGTTCCTCAAGTTTGCACACGGGCATTAGCTTGACAGTTATGCAAGGTGTGTGGTGGAAGTTATGTCAATGGCTGAAGAACTTCCCGTTCT
CTGAGTTGAGAAGTATGATTGTCGGTGAAGACAATGGAATAGCAAGAGTTGTGGATTCTTCAAATATCTTGCCAATGTGGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAAGCTTCATGAGTCCAGTGAAGAATGACGTGGAGAAATTTGATGGAAGGATGAACTTCACCTTGTGGCAAGTGCAAGTCAAGGATGTGCTGATACAATCCGAGTT
ACACAAGGCTTTGAAGAGAAGATCAGCAAGCGATGGTGCTTCCGAAAGATTAAGCGGTGATAGTGTCCCATGGAGTCCAATGGTGGTTCCAGTAGAGGAGGATTCAACAC
TAGTAGCTAGCAATTGGAAGAAGAAGAAAGATTTCGAGCAGAAGAAAGGTTCCTGGGAATGCGAACAATCTGGACACATGAAAAAGGATTTTCCTAACAGAGTAGGTTCG
TCAAAGGACTCTGGGTTGGATGTTGATGTTGTCTCTCTCGTCAGGGGAGATAGTGAATTCCTCCAAAGAAGGACAGAGTTCATCCTCATGGTATGTCTGCTTTACCATGA
TAGAGGATGTGATGTCAACGGTTCCTCAAGTTTGCACACGGGCATTAGCTTGACAGTTATGCAAGGTGTGTGGTGGAAGTTATGTCAATGGCTGAAGAACTTCCCGTTCT
CTGAGTTGAGAAGTATGATTGTCGGTGAAGACAATGGAATAGCAAGAGTTGTGGATTCTTCAAATATCTTGCCAATGTGGAATTAG
Protein sequenceShow/hide protein sequence
MPSFMSPVKNDVEKFDGRMNFTLWQVQVKDVLIQSELHKALKRRSASDGASERLSGDSVPWSPMVVPVEEDSTLVASNWKKKKDFEQKKGSWECEQSGHMKKDFPNRVGS
SKDSGLDVDVVSLVRGDSEFLQRRTEFILMVCLLYHDRGCDVNGSSSLHTGISLTVMQGVWWKLCQWLKNFPFSELRSMIVGEDNGIARVVDSSNILPMWN