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Lag0028769 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028769
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr8:30335337..30336589
RNA-Seq ExpressionLag0028769
SyntenyLag0028769
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3484396.1 reverse transcriptase [Gossypium australe]8.7e-2940.94Show/hide
Query:  MKIICWNVLGLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVGKSGGLCLFWKESLDVVLRSFNRFRIDVGVKAE--LEH
        MK +CWNV GL S+RA   L  +++ ++PQL+F+ E+K+   +    + +  FD  + V+  G  GGLCL WK+ LDV L+SF+++ IDV +K E   E 
Subjt:  MKIICWNVLGLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVGKSGGLCLFWKESLDVVLRSFNRFRIDVGVKAE--LEH

Query:  WPFTGFYGDPEVANMGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKLKSVHQGLEGMENKYSDLRKCGL
        W FTGFYG P   +    WDLL+RL+  S  PW++  DFNEI+   EK   + +  + ME     L  C L
Subjt:  WPFTGFYGDPEVANMGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKLKSVHQGLEGMENKYSDLRKCGL

TXG68544.1 hypothetical protein EZV62_003479 [Acer yangbiense]1.6e-2741.29Show/hide
Query:  ICWNVLGLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVGKSGGLCLFWKESLDVVLRSFNRFRIDVGVK-AELEHWPFT
        +CWNVLGL + RAF  L ++++ ++P L+F++++K    KA+  KV + F+    VD  G SGGL L WK+S+ V + SF+   ID  +  ++   W F+
Subjt:  ICWNVLGLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVGKSGGLCLFWKESLDVVLRSFNRFRIDVGVK-AELEHWPFT

Query:  GFYGDPEVANMGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKLKSVHQGLEGM
        GFYGDP      +SW LLRRL +++SL WV G +FNE++SM +K     +   GM
Subjt:  GFYGDPEVANMGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKLKSVHQGLEGM

TXG69190.1 hypothetical protein EZV62_004125 [Acer yangbiense]1.7e-2944.1Show/hide
Query:  GLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVGKSGGLCLFWKESLDVVLRSFNRFRIDVGVKAELEH-WPFTGFYGDP
        GL   RAF VLH ++Q N+P ++F+ E    +      ++K+ FD  LVVDR G SGGLCL WK  +DV L S++RF ID  V    +  W  TGFYG P
Subjt:  GLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVGKSGGLCLFWKESLDVVLRSFNRFRIDVGVKAELEH-WPFTGFYGDP

Query:  EVANMGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKLKSVHQGLEGMENKYSDLRKCGL
         +    + W+LLRRL+  S LPW +G DFNEIV + EK+    +    M N    L  CGL
Subjt:  EVANMGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKLKSVHQGLEGMENKYSDLRKCGL

VFQ58504.1 unnamed protein product [Cuscuta campestris]3.6e-2741.81Show/hide
Query:  VEGSPRVMKIICWNVLGLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVGKSGGLCLFWKESLDVVLRSFNRFRIDVGVK
        V G PR M II WN  GL + R    + ++V    P  +F+ E+K    KA + +VK+ F+G+ VVD VG SGGL L W+ +  V L S++RF +DV V 
Subjt:  VEGSPRVMKIICWNVLGLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVGKSGGLCLFWKESLDVVLRSFNRFRIDVGVK

Query:  AE-LEHWPFTGFYGDPEVANMGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKLKSVHQGLEGMENKYSDLRKCGL
         E    W  TGFYG+P       SWDLLR L   SSLPWV+  DFN + +  EK     Q L  +    S L +C L
Subjt:  AE-LEHWPFTGFYGDPEVANMGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKLKSVHQGLEGMENKYSDLRKCGL

VFQ82721.1 unnamed protein product [Cuscuta campestris]1.2e-2742.37Show/hide
Query:  VEGSPRVMKIICWNVLGLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVGKSGGLCLFWKESLDVVLRSFNRFRIDVGVK
        V G PR M II WN  GL + R    + ++V    P  +F+ E+K    KA + +VK+ F+G+L VD VG SGGL L W+ +  V L S++RF +DV V 
Subjt:  VEGSPRVMKIICWNVLGLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVGKSGGLCLFWKESLDVVLRSFNRFRIDVGVK

Query:  -AELEHWPFTGFYGDPEVANMGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKLKSVHQGLEGMENKYSDLRKCGL
              W  TGFYG+P       SWDLLR L   SSLPWV  SDFN + +  EK     Q L  +    S L +CGL
Subjt:  -AELEHWPFTGFYGDPEVANMGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKLKSVHQGLEGMENKYSDLRKCGL

TrEMBL top hitse value%identityAlignment
A0A5B6WSX4 Reverse transcriptase4.2e-2940.94Show/hide
Query:  MKIICWNVLGLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVGKSGGLCLFWKESLDVVLRSFNRFRIDVGVKAE--LEH
        MK +CWNV GL S+RA   L  +++ ++PQL+F+ E+K+   +    + +  FD  + V+  G  GGLCL WK+ LDV L+SF+++ IDV +K E   E 
Subjt:  MKIICWNVLGLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVGKSGGLCLFWKESLDVVLRSFNRFRIDVGVKAE--LEH

Query:  WPFTGFYGDPEVANMGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKLKSVHQGLEGMENKYSDLRKCGL
        W FTGFYG P   +    WDLL+RL+  S  PW++  DFNEI+   EK   + +  + ME     L  C L
Subjt:  WPFTGFYGDPEVANMGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKLKSVHQGLEGMENKYSDLRKCGL

A0A5C7IIT4 Uncharacterized protein8.4e-3044.1Show/hide
Query:  GLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVGKSGGLCLFWKESLDVVLRSFNRFRIDVGVKAELEH-WPFTGFYGDP
        GL   RAF VLH ++Q N+P ++F+ E    +      ++K+ FD  LVVDR G SGGLCL WK  +DV L S++RF ID  V    +  W  TGFYG P
Subjt:  GLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVGKSGGLCLFWKESLDVVLRSFNRFRIDVGVKAELEH-WPFTGFYGDP

Query:  EVANMGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKLKSVHQGLEGMENKYSDLRKCGL
         +    + W+LLRRL+  S LPW +G DFNEIV + EK+    +    M N    L  CGL
Subjt:  EVANMGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKLKSVHQGLEGMENKYSDLRKCGL

A0A803PBM9 Uncharacterized protein9.3e-2944.74Show/hide
Query:  SPRVMKIICWNVLGLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVGKSGGLCLFWKESLDVVLRSFNRFRIDVGV-KAE
        SP +MK++ WNV GL +      L  +V   +P+L+F++ES++   KA   +V + +DG  VV+  GKSGGL L W   +D  + SF+ F ID  + K E
Subjt:  SPRVMKIICWNVLGLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVGKSGGLCLFWKESLDVVLRSFNRFRIDVGV-KAE

Query:  LEHWPFTGFYGDPEVANMGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKL
         + W FTGFYGDP+      SW LL R+    S PWVIG DFNEI+  KEKL
Subjt:  LEHWPFTGFYGDPEVANMGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKL

A0A803QCP7 Uncharacterized protein1.6e-2838.19Show/hide
Query:  KRSVSVEKCAM----AVEGSPRVMKIICWNVLGLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVGKSGGLCLFWKESLD
        +R VSV+K +      +EGSP  M ++ WNV GL +    + LH  V + NP+++F++E ++  + A   +VK+ F G  VV+  GKSGG+ LFW   ++
Subjt:  KRSVSVEKCAM----AVEGSPRVMKIICWNVLGLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVGKSGGLCLFWKESLD

Query:  VVLRSFNRFRIDVGVKAEL-EHWPFTGFYGDPEVANMGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKLKSVHQGLEGMENKYSDLRKCGLSLRSVG
          + SF+ F ID  ++ E  + W FTGFYGDP+     +S  LL+RLS      W +G DFNEI+S KEK+    +    + N    L  C   LR VG
Subjt:  VVLRSFNRFRIDVGVKAEL-EHWPFTGFYGDPEVANMGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKLKSVHQGLEGMENKYSDLRKCGLSLRSVG

A0A803QLY3 Uncharacterized protein3.2e-2942.11Show/hide
Query:  KRSVSVEKCAMAVE----GSPRVMKIICWNVLGLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVGKSGGLCLFWKESLD
        +R VSV+K + A +    GSP  M  + WNV GL +      L+ +V  + PQL+F+ ESK+ N+ A    VK+ F G  VV+  GKSG L L W E ++
Subjt:  KRSVSVEKCAMAVE----GSPRVMKIICWNVLGLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVGKSGGLCLFWKESLD

Query:  VVLRSFNRFRIDVGVKAEL-EHWPFTGFYGDPEVANMGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKL
          + SF+ F ID  ++ E  + W FT FYGDP+ +    SW LL R+    S PW +G DFNEI+S KEK+
Subjt:  VVLRSFNRFRIDVGVKAEL-EHWPFTGFYGDPEVANMGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGAGGGCAAGGGAGGAGCTTGGGGAATAGTGTTAGGGGAGGATGTTTGGTTGGGGAAGCGGAGTGTGAGTGTGGAGAAATGTGCGATGGCTGTAGAGGGGTC
GCCGAGAGTTATGAAAATCATATGCTGGAATGTTCTGGGGTTGGAGAGCGCCCGAGCATTCAATGTACTGCACCAAGTGGTGCAAACTAATAATCCCCAACTTTTGTTTG
TGACAGAATCGAAGATCACGAATCTAAAAGCGAATATGTATAAGGTGAAGATGAGGTTCGATGGAGTCCTTGTGGTGGATCGTGTGGGGAAGAGCGGGGGACTATGTCTG
TTTTGGAAGGAGAGCCTGGATGTAGTATTGAGATCTTTCAATAGATTTCGTATAGATGTGGGGGTGAAAGCTGAGTTAGAACACTGGCCGTTTACAGGTTTTTATGGGGA
CCCAGAGGTGGCCAACATGGGTTATTCATGGGACTTGCTGCGGAGGCTGAGTAACTCCTCTTCCCTGCCATGGGTGATAGGAAGTGATTTTAATGAGATTGTTAGCATGA
AAGAAAAGCTAAAATCTGTGCATCAGGGACTCGAAGGTATGGAAAACAAATATTCAGATTTGAGGAAGTGTGGACTCAGTTTGAGGAGTGTAGGGAGGTTGTGGAGAGAG
AATGGGCCTTACCTAATCAGGTGTCAATGTTGGAGTAGAATCCTATTGTTGAAGTCTGGAATCATAGAGTTAAAAGGTATGCGGAGGAGTTGGCAAGTTGGGGAAAGACG
AGATGTGGAAATTTTGAGTGAAGGATCTCAATGGCCAGCCATTAGTTACAAGCTACGCTTGATAGTAAGGGGATGTCTAGGGGGCAAGAAGGACGTTGGAGAATGTGTTG
GGAGAAGAGGAAATCTACTGGCGGCAAAGGGCTTGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAGAGGGCAAGGGAGGAGCTTGGGGAATAGTGTTAGGGGAGGATGTTTGGTTGGGGAAGCGGAGTGTGAGTGTGGAGAAATGTGCGATGGCTGTAGAGGGGTC
GCCGAGAGTTATGAAAATCATATGCTGGAATGTTCTGGGGTTGGAGAGCGCCCGAGCATTCAATGTACTGCACCAAGTGGTGCAAACTAATAATCCCCAACTTTTGTTTG
TGACAGAATCGAAGATCACGAATCTAAAAGCGAATATGTATAAGGTGAAGATGAGGTTCGATGGAGTCCTTGTGGTGGATCGTGTGGGGAAGAGCGGGGGACTATGTCTG
TTTTGGAAGGAGAGCCTGGATGTAGTATTGAGATCTTTCAATAGATTTCGTATAGATGTGGGGGTGAAAGCTGAGTTAGAACACTGGCCGTTTACAGGTTTTTATGGGGA
CCCAGAGGTGGCCAACATGGGTTATTCATGGGACTTGCTGCGGAGGCTGAGTAACTCCTCTTCCCTGCCATGGGTGATAGGAAGTGATTTTAATGAGATTGTTAGCATGA
AAGAAAAGCTAAAATCTGTGCATCAGGGACTCGAAGGTATGGAAAACAAATATTCAGATTTGAGGAAGTGTGGACTCAGTTTGAGGAGTGTAGGGAGGTTGTGGAGAGAG
AATGGGCCTTACCTAATCAGGTGTCAATGTTGGAGTAGAATCCTATTGTTGAAGTCTGGAATCATAGAGTTAAAAGGTATGCGGAGGAGTTGGCAAGTTGGGGAAAGACG
AGATGTGGAAATTTTGAGTGAAGGATCTCAATGGCCAGCCATTAGTTACAAGCTACGCTTGATAGTAAGGGGATGTCTAGGGGGCAAGAAGGACGTTGGAGAATGTGTTG
GGAGAAGAGGAAATCTACTGGCGGCAAAGGGCTTGAGTTGA
Protein sequenceShow/hide protein sequence
MEEEGKGGAWGIVLGEDVWLGKRSVSVEKCAMAVEGSPRVMKIICWNVLGLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVGKSGGLCL
FWKESLDVVLRSFNRFRIDVGVKAELEHWPFTGFYGDPEVANMGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKLKSVHQGLEGMENKYSDLRKCGLSLRSVGRLWRE
NGPYLIRCQCWSRILLLKSGIIELKGMRRSWQVGERRDVEILSEGSQWPAISYKLRLIVRGCLGGKKDVGECVGRRGNLLAAKGLS