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Lag0028772 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028772
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:30483311..30483742
RNA-Seq ExpressionLag0028772
SyntenyLag0028772
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7941873.1 hypothetical protein I3843_16G069700 [Carya illinoinensis]8.3e-1650Show/hide
Query:  RNRSETLKFIKDRIWRQIQRWKGKFFSIAGKEVLLKSIVQAIPCYMMNYFCLPRCLIREVHRTMAKFWWNGSKEAR
        R++ ET K IK+R+W+++  WK  F S AG+EVL+K+++Q+IP Y MN F  PR L +E++  +A+FWWNG+KE R
Subjt:  RNRSETLKFIKDRIWRQIQRWKGKFFSIAGKEVLLKSIVQAIPCYMMNYFCLPRCLIREVHRTMAKFWWNGSKEAR

XP_010688579.1 PREDICTED: uncharacterized protein LOC104902491 [Beta vulgaris subsp. vulgaris]3.2e-1556.76Show/hide
Query:  RNRSETLKFIKDRIWRQIQRWKGKFFSIAGKEVLLKSIVQAIPCYMMNYFCLPRCLIREVHRTMAKFWWNGSKE
        R++  T   IK+RIW+++Q WK K  S  GKEVL+K++VQAIP YMM+ FCLP  LI E+H  +A+FWW GSKE
Subjt:  RNRSETLKFIKDRIWRQIQRWKGKFFSIAGKEVLLKSIVQAIPCYMMNYFCLPRCLIREVHRTMAKFWWNGSKE

XP_021761446.1 uncharacterized protein LOC110726302 [Chenopodium quinoa]4.9e-1652.63Show/hide
Query:  RNRSETLKFIKDRIWRQIQRWKGKFFSIAGKEVLLKSIVQAIPCYMMNYFCLPRCLIREVHRTMAKFWWNGSKEAR
        R++     F+KDRIW+++Q WK KF S AGKEVLLKSI+QAIP Y+M  +  P  LI+E+H  MA+FWW  + + R
Subjt:  RNRSETLKFIKDRIWRQIQRWKGKFFSIAGKEVLLKSIVQAIPCYMMNYFCLPRCLIREVHRTMAKFWWNGSKEAR

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]2.8e-1959.21Show/hide
Query:  MPRNRSETLKFIKDRIWRQIQRWKGKFFSIAGKEVLLKSIVQAIPCYMMNYFCLPRCLIREVHRTMAKFWWNGSKE
        MPRNR     +IKDR+W+ +Q WK K FSI GKEVL+K++ QAIPCY M+ F LP+ LIRE H   A+FWW  SKE
Subjt:  MPRNRSETLKFIKDRIWRQIQRWKGKFFSIAGKEVLLKSIVQAIPCYMMNYFCLPRCLIREVHRTMAKFWWNGSKE

XP_042964743.1 uncharacterized protein LOC122298967 [Carya illinoinensis]4.1e-1547.37Show/hide
Query:  RNRSETLKFIKDRIWRQIQRWKGKFFSIAGKEVLLKSIVQAIPCYMMNYFCLPRCLIREVHRTMAKFWWNGSKEAR
        R++ ET + IK+R+WR+I+ WK  F S AG+EVL+K+++Q+IP Y MN F  PR L ++++  +A FWW+G+K++R
Subjt:  RNRSETLKFIKDRIWRQIQRWKGKFFSIAGKEVLLKSIVQAIPCYMMNYFCLPRCLIREVHRTMAKFWWNGSKEAR

TrEMBL top hitse value%identityAlignment
A0A2I4F5G0 uncharacterized protein LOC1089957237.6e-1551.32Show/hide
Query:  RNRSETLKFIKDRIWRQIQRWKGKFFSIAGKEVLLKSIVQAIPCYMMNYFCLPRCLIREVHRTMAKFWWNGSKEAR
        R++  T K IKDRIWR+I  WK  F S AG+EVL+K+++Q+IP Y MN F LPR L  E++  +A+FWW+  KE +
Subjt:  RNRSETLKFIKDRIWRQIQRWKGKFFSIAGKEVLLKSIVQAIPCYMMNYFCLPRCLIREVHRTMAKFWWNGSKEAR

A0A2K3MUT8 Ribonuclease H1.3e-1450Show/hide
Query:  RNRSETLKFIKDRIWRQIQRWKGKFFSIAGKEVLLKSIVQAIPCYMMNYFCLPRCLIREVHRTMAKFWWNGSKEAR
        R++  T  FIKDRIW++I  W+ +  S AGKEV++KSI+QAIP Y+M+ + LP  LI+E+ R +  FWW GS  +R
Subjt:  RNRSETLKFIKDRIWRQIQRWKGKFFSIAGKEVLLKSIVQAIPCYMMNYFCLPRCLIREVHRTMAKFWWNGSKEAR

A0A2Z6NEN7 Uncharacterized protein9.9e-1546.05Show/hide
Query:  RNRSETLKFIKDRIWRQIQRWKGKFFSIAGKEVLLKSIVQAIPCYMMNYFCLPRCLIREVHRTMAKFWWNGSKEAR
        R + ET  ++KDRIW++I  W+G+  S AGKEV++KS++QAIP Y+M+ + +P   I+E+ R M  FWW G    R
Subjt:  RNRSETLKFIKDRIWRQIQRWKGKFFSIAGKEVLLKSIVQAIPCYMMNYFCLPRCLIREVHRTMAKFWWNGSKEAR

A0A6J1DAR4 uncharacterized protein LOC1110189541.3e-1959.21Show/hide
Query:  MPRNRSETLKFIKDRIWRQIQRWKGKFFSIAGKEVLLKSIVQAIPCYMMNYFCLPRCLIREVHRTMAKFWWNGSKE
        MPRNR     +IKDR+W+ +Q WK K FSI GKEVL+K++ QAIPCY M+ F LP+ LIRE H   A+FWW  SKE
Subjt:  MPRNRSETLKFIKDRIWRQIQRWKGKFFSIAGKEVLLKSIVQAIPCYMMNYFCLPRCLIREVHRTMAKFWWNGSKE

M5W5K8 Uncharacterized protein5.8e-1550.72Show/hide
Query:  RNRSETLKFIKDRIWRQIQRWKGKFFSIAGKEVLLKSIVQAIPCYMMNYFCLPRCLIREVHRTMAKFWW
        R+R +    +K+RIW++IQ WK K  S AGKE+LLK + QA+P YMMN F +P+CL  E+ + MA++WW
Subjt:  RNRSETLKFIKDRIWRQIQRWKGKFFSIAGKEVLLKSIVQAIPCYMMNYFCLPRCLIREVHRTMAKFWW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGCAATCGATCGGAGACGTTGAAGTTTATAAAGGACCGTATTTGGAGGCAGATCCAGAGATGGAAGGGTAAATTCTTCTCGATAGCGGGGAAGGAAGTTCTCCT
TAAGTCTATAGTTCAGGCTATTCCTTGCTATATGATGAACTATTTTTGTTTGCCTAGGTGTTTGATCAGAGAAGTTCACAGGACCATGGCTAAATTCTGGTGGAATGGGT
CTAAAGAAGCAAGGATCCTTCCTCTCTTTTGTGCTATGTTCTCAAGGGTCGTATTTTCCCCAGTCAAGATTCTTGAAAGCAGAACTTGTGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCGCAATCGATCGGAGACGTTGAAGTTTATAAAGGACCGTATTTGGAGGCAGATCCAGAGATGGAAGGGTAAATTCTTCTCGATAGCGGGGAAGGAAGTTCTCCT
TAAGTCTATAGTTCAGGCTATTCCTTGCTATATGATGAACTATTTTTGTTTGCCTAGGTGTTTGATCAGAGAAGTTCACAGGACCATGGCTAAATTCTGGTGGAATGGGT
CTAAAGAAGCAAGGATCCTTCCTCTCTTTTGTGCTATGTTCTCAAGGGTCGTATTTTCCCCAGTCAAGATTCTTGAAAGCAGAACTTGTGTATAA
Protein sequenceShow/hide protein sequence
MPRNRSETLKFIKDRIWRQIQRWKGKFFSIAGKEVLLKSIVQAIPCYMMNYFCLPRCLIREVHRTMAKFWWNGSKEARILPLFCAMFSRVVFSPVKILESRTCV