| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG7593230.1 Pentatricopeptide repeat [Arabidopsis thaliana x Arabidopsis arenosa] | 7.6e-55 | 37.13 | Show/hide |
Query: EPKSFDGVMKFDGKNFGYWKMQVKDYLTCKKVHKALKERPKDMSDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLV
E S G+ KFDG +F +W+MQ++DYL KK+H+ L +P+ M+ E+W+ LD + + IR+ LS +VA VA E T LM+ L++ YEKPSANNKV+L+
Subjt: EPKSFDGVMKFDGKNFGYWKMQVKDYLTCKKVHKALKERPKDMSDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLV
Query: KKFFNMQMSEDASVNSYINEVTTLINQLNSVKIEFSDEVNAIQLLTSLPDSWETMKTTVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTLVMT
KK F+++M E V +++NE T++NQL+SV+IEF DEV A+ LL SLP+SWE M+ VSNS GN LKF +V D + EE+RR + + ST + V
Subjt: KKFFNMQMSEDASVNSYINEVTTLINQLNSVKIEFSDEVNAIQLLTSLPDSWETMKTTVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTLVMT
Query: KGKDKVDED-NEPSSSRKKWKG-------------------------------------------------------------GHHGLVRMGNGRTSKTR
+G+D+ + N S + KG G++G V + NG
Subjt: KGKDKVDED-NEPSSSRKKWKG-------------------------------------------------------------GHHGLVRMGNGRTSKTR
Query: GIRDVSLKTECGGKLVLQDVRYVPNIKMNLISIGKFADDGYMCEFGSHQCKLKFGSQVVAVGHRKSTLY
GI D++LK G + VR+VP + NLIS+G+ D G+ FG K+K GS VVA GH++ +LY
Subjt: GIRDVSLKTECGGKLVLQDVRYVPNIKMNLISIGKFADDGYMCEFGSHQCKLKFGSQVVAVGHRKSTLY
|
|
| RVW17147.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.8e-56 | 40.38 | Show/hide |
Query: EPKSFDGVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYL
E G+ KFDG +F YW+MQ++DYL +K+H L +P+ M E+W LD + + IR+ LS VA V E T LM+ L+ YEKPSANNKV+L
Subjt: EPKSFDGVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYL
Query: VKKFFNMQMSEDASVNSYINEVTTLINQLNSVKIEFSDEVNAIQLLTSLPDSWETMKTTVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-V
+KK FN++M+E+ASV ++NE T+ NQL+SV+I+F DE+ A+ +L SLP+SWE M+ VSNSTG LK++++ DL +AEEIRR+ + + S GS L +
Subjt: VKKFFNMQMSEDASVNSYINEVTTLINQLNSVKIEFSDEVNAIQLLTSLPDSWETMKTTVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-V
Query: MTKGKDKVDEDNEPSSSR--------KKWKGGHHGLVRMGNGRTSKTRGIRDVSLKTECGGKLVLQDVRYVPNIKMNLISIGKFADDGYMCEFGSHQCKL
T+G+ N+ +S + + G G V + +G G+ DV + G +L+ VR++P+++ NLIS+G+ D+G+ F K+
Subjt: MTKGKDKVDEDNEPSSSR--------KKWKGGHHGLVRMGNGRTSKTRGIRDVSLKTECGGKLVLQDVRYVPNIKMNLISIGKFADDGYMCEFGSHQCKL
Query: KFGSQVVAVGHRKSTLY
G++V+A G + TLY
Subjt: KFGSQVVAVGHRKSTLY
|
|
| RVW44991.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.7e-54 | 39.81 | Show/hide |
Query: EPKSFDGVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYL
E + G+ KFDG +F YW+MQ++DYL +K+H L + + M E+W LD + IR+ LS VA V E T LM++L+ YEKPSANNKV+L
Subjt: EPKSFDGVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYL
Query: VKKFFNMQMSEDASVNSYINEVTTLINQLNSVKIEFSDEVNAIQLLTSLPDSWETMKTTVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-V
+KK FN++M E+ASV ++NE T+ NQL+SV+I+F DE+ A+ +L SLP+SWE M+ TVSNSTG LK++++ DL +AEEIRR+ +++ S GS L +
Subjt: VKKFFNMQMSEDASVNSYINEVTTLINQLNSVKIEFSDEVNAIQLLTSLPDSWETMKTTVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-V
Query: MTKG-----------KDKVDEDNEPSSSRKKWKGGHHGLVRMGNGRTSKTRGIRDVSLKTECGGKLVLQDVRYVPNIKMNLISIGKFADDGYMCEFGSHQ
T+G K K ++D + + + + G G V + +G G+ DV + G +L+ VR++P+++ NLIS+G+ D+G+ F
Subjt: MTKG-----------KDKVDEDNEPSSSRKKWKGGHHGLVRMGNGRTSKTRGIRDVSLKTECGGKLVLQDVRYVPNIKMNLISIGKFADDGYMCEFGSHQ
Query: CKLKFGSQVVAVGHRKSTL
K+ ++V+A G + TL
Subjt: CKLKFGSQVVAVGHRKSTL
|
|
| RVW60263.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 7.6e-55 | 39.38 | Show/hide |
Query: GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFN
G+ KFDG +F YW+MQ++DYL +K+H L +P+ M E+W LD + + IR+ LS VA V E T LM++L+ YEKPSANNKV+L+KK FN
Subjt: GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFN
Query: MQMSEDASVNSYINEVTTLINQLNSVKIEFSDEVNAIQLLTSLPDSWETMKTTVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGKD
++M+E+ASV ++NE T+ NQL+SV+I+F DE+ A+ +L SLP+SWE M+ VSNSTG LK++++ DL +AEEIRR+ + + S GS L + T+G++
Subjt: MQMSEDASVNSYINEVTTLINQLNSVKIEFSDEVNAIQLLTSLPDSWETMKTTVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGKD
Query: KVDE---------------DNEPSSSR-------KKWKGGHHGLVRMGNGRTSKTRGIRDVSLKTECGGKLVLQDVRYVPNIKMNLISIGKFADDGYMCE
+V + D+ S + + G G V + +G G+ DV + G +L+ VR++P+++ NLIS+G+ D+G+
Subjt: KVDE---------------DNEPSSSR-------KKWKGGHHGLVRMGNGRTSKTRGIRDVSLKTECGGKLVLQDVRYVPNIKMNLISIGKFADDGYMCE
Query: FGSHQCKLKFGSQVVAVGHRKSTLY
F K+ G++V+A G + TLY
Subjt: FGSHQCKLKFGSQVVAVGHRKSTLY
|
|
| TKS02608.1 hypothetical protein D5086_0000161380 [Populus alba] | 1.7e-54 | 35.48 | Show/hide |
Query: GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFN
G+ KFDG +FGYWKMQ++DYL KK+H L +P+ M E+W+ LD + + IR+ LS VA V E + KLME+L+ YEKPSANNKV+L+KK FN
Subjt: GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFN
Query: MQMSEDASVNSYINEVTTLINQLNSVKIEFSDEVNAIQLLTSLPDSWETMKTTVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGKD
++M E+ SV ++N T+ NQL+SV+IEF DE+ A+ LL SLP SWE M+T VSNS G + LK+ ++ DL +AEE+RR+ S + S+ GS L + T+G+
Subjt: MQMSEDASVNSYINEVTTLINQLNSVKIEFSDEVNAIQLLTSLPDSWETMKTTVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGKD
Query: KVDEDNEPSSSRKKWK--------------------------------------------------------------------------------GGHH
+ D + S+ +++ GG H
Subjt: KVDEDNEPSSSRKKWK--------------------------------------------------------------------------------GGHH
Query: GLVRMGNGRTSKTRGIRDVSLKTECGGKLVLQDVRYVPNIKMNLISIGKFADDGYMCEFGSHQCKLKFGSQVVAVGHRKSTLYRC--QLNVAKGSERQWM
G+V + +G K GI DV +KT G LQ+VR+VP +K LIS+G+ D G+ F K+ G+ V+A G + TL +L V++ +E +W
Subjt: GLVRMGNGRTSKTRGIRDVSLKTECGGKLVLQDVRYVPNIKMNLISIGKFADDGYMCEFGSHQCKLKFGSQVVAVGHRKSTLYRC--QLNVAKGSERQWM
Query: PVK
+K
Subjt: PVK
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9GZ72 Uncharacterized protein | 6.3e-55 | 38.7 | Show/hide |
Query: GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFN
G+ KFDG +FGYWKMQ++DYL KK+H L ++P M D +W LD + + IR+ LS +A V ETT V LM +L+ YEKPSANNKV+L+KK FN
Subjt: GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFN
Query: MQMSEDASVNSYINEVTTLINQLNSVKIEFSDEVNAIQLLTSLPDSWETMKTTVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTLVM-TKGKD
++M+E A+V ++NE T+ NQL+SV+IEF DE+ A+ +L SLP+SWE M+ VSNS G LK+ ++ DL ++EE+RR+ + ++ G V + KD
Subjt: MQMSEDASVNSYINEVTTLINQLNSVKIEFSDEVNAIQLLTSLPDSWETMKTTVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTLVM-TKGKD
Query: KVDEDNEPSSS--------------------------------------RKK-----WKGGHHGLVRMGNGRTSKTRGIRDVSLKTECGGKLVLQDVRYV
+D + +++ R K +K G G V+MGN SK GI DV +KT G ++L++VR+V
Subjt: KVDEDNEPSSS--------------------------------------RKK-----WKGGHHGLVRMGNGRTSKTRGIRDVSLKTECGGKLVLQDVRYV
Query: PNIKMNLISIGKFADDGYMCEFGSHQCKLKFGSQVVAVGHRKSTLYRCQLNVAK
P++ NLIS GY G+ + KL G VVA G LY ++ K
Subjt: PNIKMNLISIGKFADDGYMCEFGSHQCKLKFGSQVVAVGHRKSTLYRCQLNVAK
|
|
| A0A438C1P0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.8e-57 | 40.38 | Show/hide |
Query: EPKSFDGVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYL
E G+ KFDG +F YW+MQ++DYL +K+H L +P+ M E+W LD + + IR+ LS VA V E T LM+ L+ YEKPSANNKV+L
Subjt: EPKSFDGVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYL
Query: VKKFFNMQMSEDASVNSYINEVTTLINQLNSVKIEFSDEVNAIQLLTSLPDSWETMKTTVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-V
+KK FN++M+E+ASV ++NE T+ NQL+SV+I+F DE+ A+ +L SLP+SWE M+ VSNSTG LK++++ DL +AEEIRR+ + + S GS L +
Subjt: VKKFFNMQMSEDASVNSYINEVTTLINQLNSVKIEFSDEVNAIQLLTSLPDSWETMKTTVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-V
Query: MTKGKDKVDEDNEPSSSR--------KKWKGGHHGLVRMGNGRTSKTRGIRDVSLKTECGGKLVLQDVRYVPNIKMNLISIGKFADDGYMCEFGSHQCKL
T+G+ N+ +S + + G G V + +G G+ DV + G +L+ VR++P+++ NLIS+G+ D+G+ F K+
Subjt: MTKGKDKVDEDNEPSSSR--------KKWKGGHHGLVRMGNGRTSKTRGIRDVSLKTECGGKLVLQDVRYVPNIKMNLISIGKFADDGYMCEFGSHQCKL
Query: KFGSQVVAVGHRKSTLY
G++V+A G + TLY
Subjt: KFGSQVVAVGHRKSTLY
|
|
| A0A438EB12 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.2e-55 | 39.81 | Show/hide |
Query: EPKSFDGVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYL
E + G+ KFDG +F YW+MQ++DYL +K+H L + + M E+W LD + IR+ LS VA V E T LM++L+ YEKPSANNKV+L
Subjt: EPKSFDGVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYL
Query: VKKFFNMQMSEDASVNSYINEVTTLINQLNSVKIEFSDEVNAIQLLTSLPDSWETMKTTVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-V
+KK FN++M E+ASV ++NE T+ NQL+SV+I+F DE+ A+ +L SLP+SWE M+ TVSNSTG LK++++ DL +AEEIRR+ +++ S GS L +
Subjt: VKKFFNMQMSEDASVNSYINEVTTLINQLNSVKIEFSDEVNAIQLLTSLPDSWETMKTTVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-V
Query: MTKG-----------KDKVDEDNEPSSSRKKWKGGHHGLVRMGNGRTSKTRGIRDVSLKTECGGKLVLQDVRYVPNIKMNLISIGKFADDGYMCEFGSHQ
T+G K K ++D + + + + G G V + +G G+ DV + G +L+ VR++P+++ NLIS+G+ D+G+ F
Subjt: MTKG-----------KDKVDEDNEPSSSRKKWKGGHHGLVRMGNGRTSKTRGIRDVSLKTECGGKLVLQDVRYVPNIKMNLISIGKFADDGYMCEFGSHQ
Query: CKLKFGSQVVAVGHRKSTL
K+ ++V+A G + TL
Subjt: CKLKFGSQVVAVGHRKSTL
|
|
| A0A438FJS0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.7e-55 | 39.38 | Show/hide |
Query: GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFN
G+ KFDG +F YW+MQ++DYL +K+H L +P+ M E+W LD + + IR+ LS VA V E T LM++L+ YEKPSANNKV+L+KK FN
Subjt: GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFN
Query: MQMSEDASVNSYINEVTTLINQLNSVKIEFSDEVNAIQLLTSLPDSWETMKTTVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGKD
++M+E+ASV ++NE T+ NQL+SV+I+F DE+ A+ +L SLP+SWE M+ VSNSTG LK++++ DL +AEEIRR+ + + S GS L + T+G++
Subjt: MQMSEDASVNSYINEVTTLINQLNSVKIEFSDEVNAIQLLTSLPDSWETMKTTVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGKD
Query: KVDE---------------DNEPSSSR-------KKWKGGHHGLVRMGNGRTSKTRGIRDVSLKTECGGKLVLQDVRYVPNIKMNLISIGKFADDGYMCE
+V + D+ S + + G G V + +G G+ DV + G +L+ VR++P+++ NLIS+G+ D+G+
Subjt: KVDE---------------DNEPSSSR-------KKWKGGHHGLVRMGNGRTSKTRGIRDVSLKTECGGKLVLQDVRYVPNIKMNLISIGKFADDGYMCE
Query: FGSHQCKLKFGSQVVAVGHRKSTLY
F K+ G++V+A G + TLY
Subjt: FGSHQCKLKFGSQVVAVGHRKSTLY
|
|
| A0A7N2RFD8 Integrase catalytic domain-containing protein | 3.7e-55 | 39.63 | Show/hide |
Query: GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFN
G+ KFDG +FG+W+MQ++DYL +K+H L E+P+ M E+W LD + + IR+ LS VA V E T LM+ L YEKPSANNKV+L+KK FN
Subjt: GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFN
Query: MQMSEDASVNSYINEVTTLINQLNSVKIEFSDEVNAIQLLTSLPDSWETMKTTVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGKD
++M+E+ASV ++NE T+ NQL+SV+I+F DE+ A+ +L SLP+SWE M+ VSNSTG LK++++ DL +AEEIRR+ + + GS L + T+G+
Subjt: MQMSEDASVNSYINEVTTLINQLNSVKIEFSDEVNAIQLLTSLPDSWETMKTTVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGKD
Query: KVDEDNEPSSSRKK-----------------W---KGGHHGLVRMGNGRTSKTRGIRDVSLKTECGGKLVLQDVRYVPNIKMNLISIGKFADDGYMCEFG
+ ++ P S+ + W K G G V + +G G+ DV + G +L+ +R++P+++ NLIS+G+ D+G+ +F
Subjt: KVDEDNEPSSSRKK-----------------W---KGGHHGLVRMGNGRTSKTRGIRDVSLKTECGGKLVLQDVRYVPNIKMNLISIGKFADDGYMCEFG
Query: SHQCKLKFGSQVVAVGHRKSTLY
K+ G++V+A G + TLY
Subjt: SHQCKLKFGSQVVAVGHRKSTLY
|
|
